RNA–Protein interactions for RNA: ENST00000524516.1

PUM1-213, Transcript of pumilio RNA binding family member 1, humanhuman

TSL 2

Gene PUM1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUM1-213ENST00000524516 ZBTB16Q05516 673 aa8.55□□□□□ -1.04
PUM1-213ENST00000524516 SRSF11Q05519 484 aaKnown RBP8.55□□□□□ -1.04
PUM1-213ENST00000524516 STRN3Q13033 797 aa8.55□□□□□ -1.04
PUM1-213ENST00000524516 CDKN3Q16667 212 aa8.55□□□□□ -1.04
PUM1-213ENST00000524516 CCDC142Q17RM4 750 aa8.55□□□□□ -1.04
PUM1-213ENST00000524516 GEN1Q17RS7 908 aa8.55□□□□□ -1.04
PUM1-213ENST00000524516 EIF2S3LQ2VIR3 472 aaKnown RBP8.55□□□□□ -1.04
PUM1-213ENST00000524516 JADE1Q6IE81 842 aa8.55□□□□□ -1.04
PUM1-213ENST00000524516 RAB11FIP2Q7L804 512 aa8.55□□□□□ -1.04
PUM1-213ENST00000524516 ADGRF2Q8IZF7 708 aa8.55□□□□□ -1.04
PUM1-213ENST00000524516 TPCN2Q8NHX9 752 aa8.55□□□□□ -1.04
PUM1-213ENST00000524516 CPT1CQ8TCG5 803 aa8.55□□□□□ -1.04
PUM1-213ENST00000524516 FUBP3Q96I24 572 aaKnown RBP eCLIP8.55□□□□□ -1.04
PUM1-213ENST00000524516 SPATA17Q96L03 361 aa8.55□□□□□ -1.04
PUM1-213ENST00000524516 TCEANC2Q96MN5 208 aa8.55□□□□□ -1.04
PUM1-213ENST00000524516 CATSPER2Q96P56 530 aa8.55□□□□□ -1.04
PUM1-213ENST00000524516 SLC12A9Q9BXP2 914 aa8.55□□□□□ -1.04
PUM1-213ENST00000524516 TMEM134Q9H6X4 195 aa8.55□□□□□ -1.04
PUM1-213ENST00000524516 RUBCNLQ9H714 662 aa8.55□□□□□ -1.04
PUM1-213ENST00000524516 SH3GLB2Q9NR46 395 aa8.55□□□□□ -1.04
PUM1-213ENST00000524516 UCKL1Q9NWZ5 548 aa8.55□□□□□ -1.04
PUM1-213ENST00000524516 PISDQ9UG56 409 aa8.55□□□□□ -1.04
PUM1-213ENST00000524516 SVILO95425 2214 aa8.55□□□□□ -1.04
PUM1-213ENST00000524516 CSMD2Q7Z408 3487 aa8.55□□□□□ -1.04
PUM1-213ENST00000524516 COL27A1Q8IZC6 1860 aaPredicted RBP8.55□□□□□ -1.04
PUM1-213ENST00000524516 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP8.54□□□□□ -1.04
PUM1-213ENST00000524516 BHMG1C9JSJ3 638 aaPredicted RBP8.54□□□□□ -1.04
PUM1-213ENST00000524516 PIRO00625 290 aa8.54□□□□□ -1.04
PUM1-213ENST00000524516 NADKO95544 446 aaPredicted RBP8.54□□□□□ -1.04
PUM1-213ENST00000524516 LDLRP01130 860 aa8.54□□□□□ -1.04
PUM1-213ENST00000524516 CISD3P0C7P0 127 aa8.54□□□□□ -1.04
PUM1-213ENST00000524516 MAGEA11P43364 429 aa8.54□□□□□ -1.04
PUM1-213ENST00000524516 NPTX2P47972 431 aa8.54□□□□□ -1.04
PUM1-213ENST00000524516 GALCP54803 685 aa8.54□□□□□ -1.04
PUM1-213ENST00000524516 RPS14P62263 151 aaKnown RBP8.54□□□□□ -1.04
PUM1-213ENST00000524516 SFSWAPQ12872 951 aaKnown RBP8.54□□□□□ -1.04
PUM1-213ENST00000524516 TAF10Q12962 218 aa8.54□□□□□ -1.04
PUM1-213ENST00000524516 EIF3IQ13347 325 aaKnown RBP8.54□□□□□ -1.04
PUM1-213ENST00000524516 ZNF177Q13360 481 aaPredicted RBP8.54□□□□□ -1.04
PUM1-213ENST00000524516 CAMK2GQ13555 558 aaPredicted RBP8.54□□□□□ -1.04
PUM1-213ENST00000524516 SEPT6Q14141 434 aa8.54□□□□□ -1.04
PUM1-213ENST00000524516 SPIDRQ14159 915 aa8.54□□□□□ -1.04
PUM1-213ENST00000524516 SV2CQ496J9 727 aa8.54□□□□□ -1.04
PUM1-213ENST00000524516 FNDC3BQ53EP0 1204 aaKnown RBP8.54□□□□□ -1.04
PUM1-213ENST00000524516 TDRD10Q5VZ19 366 aaKnown RBP8.54□□□□□ -1.04
PUM1-213ENST00000524516 GUSBP11Q6P575 273 aa8.54□□□□□ -1.04
PUM1-213ENST00000524516 C4orf50Q6ZRC1 276 aa8.54□□□□□ -1.04
PUM1-213ENST00000524516 TAS1R3Q7RTX0 852 aa8.54□□□□□ -1.04
PUM1-213ENST00000524516 EFL1Q7Z2Z2 1120 aaKnown RBP8.54□□□□□ -1.04
PUM1-213ENST00000524516 ANKS1BQ7Z6G8 1248 aa8.54□□□□□ -1.04
PUM1-213ENST00000524516 ZFAND4Q86XD8 727 aa8.54□□□□□ -1.04
PUM1-213ENST00000524516 ZNF366Q8N895 744 aa8.54□□□□□ -1.04
PUM1-213ENST00000524516 JPH3Q8WXH2 748 aaPredicted RBP8.54□□□□□ -1.04
PUM1-213ENST00000524516 SORCS1Q8WY21 1168 aa8.54□□□□□ -1.04
PUM1-213ENST00000524516 TSPAN18Q96SJ8 248 aa8.54□□□□□ -1.04
PUM1-213ENST00000524516 NAP1L4Q99733 375 aaKnown RBP8.54□□□□□ -1.04
PUM1-213ENST00000524516 ACBD6Q9BR61 282 aa8.54□□□□□ -1.04
PUM1-213ENST00000524516 TTLL2Q9BWV7 592 aa8.54□□□□□ -1.04
PUM1-213ENST00000524516 FBRSQ9HAH7 460 aa8.54□□□□□ -1.04
PUM1-213ENST00000524516 KMT5AQ9NQR1 393 aa8.54□□□□□ -1.04
PUM1-213ENST00000524516 PRDM8Q9NQV8 689 aa8.54□□□□□ -1.04
PUM1-213ENST00000524516 GJB4Q9NTQ9 266 aa8.54□□□□□ -1.04
PUM1-213ENST00000524516 NLGN3Q9NZ94 848 aa8.54□□□□□ -1.04
PUM1-213ENST00000524516 MARK1Q9P0L2 795 aa8.54□□□□□ -1.04
PUM1-213ENST00000524516 TP53TG5Q9Y2B4 290 aa8.54□□□□□ -1.04
PUM1-213ENST00000524516 SNX14Q9Y5W7 946 aa8.54□□□□□ -1.04
PUM1-213ENST00000524516 ARID1BQ8NFD5 2236 aaPredicted RBP8.53□□□□□ -1.04
PUM1-213ENST00000524516 LY6G6EA0A0G2JKS1 128 aa8.53□□□□□ -1.04
PUM1-213ENST00000524516 KPNA7A9QM74 516 aa8.53□□□□□ -1.04
PUM1-213ENST00000524516 NVLO15381 856 aaKnown RBP8.53□□□□□ -1.04
PUM1-213ENST00000524516 CNTN5O94779 1100 aa8.53□□□□□ -1.04
PUM1-213ENST00000524516 HGFP14210 728 aa8.53□□□□□ -1.04
PUM1-213ENST00000524516 NR1D1P20393 614 aa8.53□□□□□ -1.04
PUM1-213ENST00000524516 BDNFP23560 247 aa8.53□□□□□ -1.04
PUM1-213ENST00000524516 RCAN1P53805 252 aa8.53□□□□□ -1.04
PUM1-213ENST00000524516 MFAP3P55082 362 aa8.53□□□□□ -1.04
PUM1-213ENST00000524516 KCNJ12Q14500 433 aa8.53□□□□□ -1.04
PUM1-213ENST00000524516 TMEM132DQ14C87 1099 aa8.53□□□□□ -1.04
PUM1-213ENST00000524516 EIF4HQ15056 248 aaKnown RBP8.53□□□□□ -1.04
PUM1-213ENST00000524516 HECTD3Q5T447 861 aa8.53□□□□□ -1.04
PUM1-213ENST00000524516 ZNF776Q68DI1 518 aaPredicted RBP8.53□□□□□ -1.04
PUM1-213ENST00000524516 NAPEPLDQ6IQ20 393 aa8.53□□□□□ -1.04
PUM1-213ENST00000524516 MFSD2AQ8NA29 543 aa8.53□□□□□ -1.04
PUM1-213ENST00000524516 TTC13Q8NBP0 860 aa8.53□□□□□ -1.04
PUM1-213ENST00000524516 OR2T34Q8NGX1 318 aa8.53□□□□□ -1.04
PUM1-213ENST00000524516 WBP2Q969T9 261 aa8.53□□□□□ -1.04
PUM1-213ENST00000524516 BICD1Q96G01 975 aa8.53□□□□□ -1.04
PUM1-213ENST00000524516 ZNF560Q96MR9 790 aa8.53□□□□□ -1.04
PUM1-213ENST00000524516 DUSP9Q99956 384 aaKnown RBP8.53□□□□□ -1.04
PUM1-213ENST00000524516 DUSP23Q9BVJ7 150 aa8.53□□□□□ -1.04
PUM1-213ENST00000524516 RNF26Q9BY78 433 aaPredicted RBP8.53□□□□□ -1.04
PUM1-213ENST00000524516 STRADBQ9C0K7 418 aa8.53□□□□□ -1.04
PUM1-213ENST00000524516 OSBPL3Q9H4L5 887 aa8.53□□□□□ -1.04
PUM1-213ENST00000524516 ELOVL2Q9NXB9 296 aa8.53□□□□□ -1.04
PUM1-213ENST00000524516 FBXL12Q9NXK8 326 aa8.53□□□□□ -1.04
PUM1-213ENST00000524516 ORC3Q9UBD5 711 aaPredicted RBP8.53□□□□□ -1.04
PUM1-213ENST00000524516 MAGEC2Q9UBF1 373 aaPredicted RBP8.53□□□□□ -1.04
PUM1-213ENST00000524516 ERRFI1Q9UJM3 462 aaPredicted RBP8.53□□□□□ -1.04
PUM1-213ENST00000524516 LSM7Q9UK45 103 aaKnown RBP8.53□□□□□ -1.04
PUM1-213ENST00000524516 SLC27A6Q9Y2P4 619 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms