RNA–Protein interactions for RNA: ENST00000521578.5

PTP4A3-204, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTP4A3, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-204ENST00000521578 TAS2R40P59535 323 aa22.99■■□□□ 1.27
PTP4A3-204ENST00000521578 NTHL1P78549 312 aa22.99■■□□□ 1.27
PTP4A3-204ENST00000521578 ADIGQ0VDE8 80 aa22.99■■□□□ 1.27
PTP4A3-204ENST00000521578 PPP1R15BQ5SWA1 713 aa22.99■■□□□ 1.27
PTP4A3-204ENST00000521578 ZDHHC24Q6UX98 284 aa22.99■■□□□ 1.27
PTP4A3-204ENST00000521578 GPR149Q86SP6 731 aa22.99■■□□□ 1.27
PTP4A3-204ENST00000521578 KCTD13Q8WZ19 329 aa22.99■■□□□ 1.27
PTP4A3-204ENST00000521578 HLA-CQ95604 372 aa22.99■■□□□ 1.27
PTP4A3-204ENST00000521578 CPXM1Q96SM3 734 aa22.99■■□□□ 1.27
PTP4A3-204ENST00000521578 FAM129AQ9BZQ8 928 aa22.99■■□□□ 1.27
PTP4A3-204ENST00000521578 MIS12Q9H081 205 aa22.99■■□□□ 1.27
PTP4A3-204ENST00000521578 TJP2Q9UDY2 1190 aa22.99■■□□□ 1.27
PTP4A3-204ENST00000521578 SNX24Q9Y343 169 aa22.99■■□□□ 1.27
PTP4A3-204ENST00000521578 RTN3O95197 1032 aaPredicted RBP22.98■■□□□ 1.27
PTP4A3-204ENST00000521578 KRT14P02533 472 aa22.98■■□□□ 1.27
PTP4A3-204ENST00000521578 SNX16P57768 344 aa22.98■■□□□ 1.27
PTP4A3-204ENST00000521578 RAB41Q5JT25 222 aa22.98■■□□□ 1.27
PTP4A3-204ENST00000521578 CES5AQ6NT32 575 aa22.98■■□□□ 1.27
PTP4A3-204ENST00000521578 ERICH1Q86X53 443 aa22.98■■□□□ 1.27
PTP4A3-204ENST00000521578 CCDC105Q8IYK2 499 aa22.98■■□□□ 1.27
PTP4A3-204ENST00000521578 EXD1Q8NHP7 514 aa22.98■■□□□ 1.27
PTP4A3-204ENST00000521578 STK32AQ8WU08 396 aa22.98■■□□□ 1.27
PTP4A3-204ENST00000521578 PKNOX2Q96KN3 472 aa22.98■■□□□ 1.27
PTP4A3-204ENST00000521578 HSFY1Q96LI6 401 aa22.98■■□□□ 1.27
PTP4A3-204ENST00000521578 SLC4A5Q9BY07 1137 aa22.98■■□□□ 1.27
PTP4A3-204ENST00000521578 ADAM7Q9H2U9 754 aa22.98■■□□□ 1.27
PTP4A3-204ENST00000521578 ASAH2Q9NR71 780 aa22.98■■□□□ 1.27
PTP4A3-204ENST00000521578 STRIP2Q9ULQ0 834 aa22.98■■□□□ 1.27
PTP4A3-204ENST00000521578 PAPLNO95428 1278 aa22.97■■□□□ 1.27
PTP4A3-204ENST00000521578 RHOP08100 348 aa22.97■■□□□ 1.27
PTP4A3-204ENST00000521578 POU2F2P09086 479 aa22.97■■□□□ 1.27
PTP4A3-204ENST00000521578 MYL4P12829 197 aa22.97■■□□□ 1.27
PTP4A3-204ENST00000521578 YWHAQP27348 245 aa22.97■■□□□ 1.27
PTP4A3-204ENST00000521578 DHX9Q08211 1270 aaKnown RBP22.97■■□□□ 1.27
PTP4A3-204ENST00000521578 EMC10Q5UCC4 262 aa22.97■■□□□ 1.27
PTP4A3-204ENST00000521578 LRRC38Q5VT99 294 aa22.97■■□□□ 1.27
PTP4A3-204ENST00000521578 DNAJC24Q6P3W2 148 aa22.97■■□□□ 1.27
PTP4A3-204ENST00000521578 SIX6OS1Q8N1H7 587 aa22.97■■□□□ 1.27
PTP4A3-204ENST00000521578 LRRC3Q9BY71 257 aa22.97■■□□□ 1.27
PTP4A3-204ENST00000521578 CD207Q9UJ71 328 aa22.97■■□□□ 1.27
PTP4A3-204ENST00000521578 E5RJQ4 531 aa22.96■■□□□ 1.27
PTP4A3-204ENST00000521578 ECEL1O95672 775 aa22.96■■□□□ 1.27
PTP4A3-204ENST00000521578 USP17L7P0C7H9 530 aa22.96■■□□□ 1.27
PTP4A3-204ENST00000521578 RPL21P46778 160 aaKnown RBP22.96■■□□□ 1.27
PTP4A3-204ENST00000521578 RPL7AP62424 266 aaKnown RBP22.96■■□□□ 1.27
PTP4A3-204ENST00000521578 TAF10Q12962 218 aa22.96■■□□□ 1.27
PTP4A3-204ENST00000521578 PTPN20Q4JDL3 420 aa22.96■■□□□ 1.27
PTP4A3-204ENST00000521578 PABPC1LQ4VXU2 614 aaKnown RBP22.96■■□□□ 1.27
PTP4A3-204ENST00000521578 SYDE1Q6ZW31 735 aaPredicted RBP22.96■■□□□ 1.27
PTP4A3-204ENST00000521578 TMC8Q8IU68 726 aa22.96■■□□□ 1.27
PTP4A3-204ENST00000521578 SMRP1Q8NCR6 262 aa22.96■■□□□ 1.27
PTP4A3-204ENST00000521578 NDRG1Q92597 394 aaKnown RBP22.96■■□□□ 1.27
PTP4A3-204ENST00000521578 MYRFLQ96LU7 910 aa22.96■■□□□ 1.27
PTP4A3-204ENST00000521578 TTLL2Q9BWV7 592 aa22.96■■□□□ 1.27
PTP4A3-204ENST00000521578 ULBP1Q9BZM6 244 aa22.96■■□□□ 1.27
PTP4A3-204ENST00000521578 SYNCQ9H7C4 482 aa22.96■■□□□ 1.27
PTP4A3-204ENST00000521578 HOMER3Q9NSC5 361 aa22.96■■□□□ 1.27
PTP4A3-204ENST00000521578 PRDM4Q9UKN5 801 aa22.96■■□□□ 1.27
PTP4A3-204ENST00000521578 RPL34P49207 117 aaKnown RBP22.96■■□□□ 1.27
PTP4A3-204ENST00000521578 KLF1Q13351 362 aaPredicted RBP22.96■■□□□ 1.27
PTP4A3-204ENST00000521578 KCTD19Q17RG1 926 aaPredicted RBP22.96■■□□□ 1.27
PTP4A3-204ENST00000521578 TMEM110Q86TL2 294 aa22.96■■□□□ 1.27
PTP4A3-204ENST00000521578 SCUBE3Q8IX30 993 aa22.96■■□□□ 1.27
PTP4A3-204ENST00000521578 NIPA2Q8N8Q9 360 aa22.96■■□□□ 1.27
PTP4A3-204ENST00000521578 C3orf20Q8ND61 904 aa22.96■■□□□ 1.27
PTP4A3-204ENST00000521578 FBXO32Q969P5 355 aa22.96■■□□□ 1.27
PTP4A3-204ENST00000521578 TRMT2BQ96GJ1 504 aaKnown RBP22.96■■□□□ 1.27
PTP4A3-204ENST00000521578 HERPUD2Q9BSE4 406 aa22.96■■□□□ 1.27
PTP4A3-204ENST00000521578 FBXO44Q9H4M3 255 aa22.96■■□□□ 1.27
PTP4A3-204ENST00000521578 TMBIM4Q9HC24 238 aa22.96■■□□□ 1.27
PTP4A3-204ENST00000521578 PRDM6Q9NQX0 595 aa22.96■■□□□ 1.27
PTP4A3-204ENST00000521578 IL37Q9NZH6 218 aa22.96■■□□□ 1.27
PTP4A3-204ENST00000521578 USP3Q9Y6I4 520 aa22.96■■□□□ 1.27
PTP4A3-204ENST00000521578 NOTCH4Q99466 2003 aa22.96■■□□□ 1.27
PTP4A3-204ENST00000521578 SHOX2O60902 331 aaPredicted RBP22.95■■□□□ 1.26
PTP4A3-204ENST00000521578 GJB6O95452 261 aa22.95■■□□□ 1.26
PTP4A3-204ENST00000521578 GABRR2P28476 465 aa22.95■■□□□ 1.26
PTP4A3-204ENST00000521578 ACTN2P35609 894 aa22.95■■□□□ 1.26
PTP4A3-204ENST00000521578 CCR2P41597 374 aa22.95■■□□□ 1.26
PTP4A3-204ENST00000521578 ACADSBP45954 432 aa22.95■■□□□ 1.26
PTP4A3-204ENST00000521578 SKOR1P84550 965 aa22.95■■□□□ 1.26
PTP4A3-204ENST00000521578 ATAT1Q5SQI0 421 aa22.95■■□□□ 1.26
PTP4A3-204ENST00000521578 CYP4A22Q5TCH4 519 aa22.95■■□□□ 1.26
PTP4A3-204ENST00000521578 PDZD4Q76G19 769 aaPredicted RBP22.95■■□□□ 1.26
PTP4A3-204ENST00000521578 IPO4Q8TEX9 1081 aaKnown RBP22.95■■□□□ 1.26
PTP4A3-204ENST00000521578 CLEC4CQ8WTT0 213 aa22.95■■□□□ 1.26
PTP4A3-204ENST00000521578 C1orf54Q8WWF1 131 aa22.95■■□□□ 1.26
PTP4A3-204ENST00000521578 ATP6V1G3Q96LB4 118 aa22.95■■□□□ 1.26
PTP4A3-204ENST00000521578 DCLK3Q9C098 648 aa22.95■■□□□ 1.26
PTP4A3-204ENST00000521578 WDR35Q9P2L0 1181 aa22.95■■□□□ 1.26
PTP4A3-204ENST00000521578 UXTQ9UBK9 157 aaPredicted RBP22.95■■□□□ 1.26
PTP4A3-204ENST00000521578 FEZ2Q9UHY8 353 aaPredicted RBP22.95■■□□□ 1.26
PTP4A3-204ENST00000521578 MYO16Q9Y6X6 1858 aa22.94■■□□□ 1.26
PTP4A3-204ENST00000521578 HMGB1P1B2RPK0 211 aaPredicted RBP22.94■■□□□ 1.26
PTP4A3-204ENST00000521578 ZBED1O96006 694 aa22.94■■□□□ 1.26
PTP4A3-204ENST00000521578 ERBB2P04626 1255 aa22.94■■□□□ 1.26
PTP4A3-204ENST00000521578 GJA1P17302 382 aa22.94■■□□□ 1.26
PTP4A3-204ENST00000521578 KCNJ1P48048 391 aa22.94■■□□□ 1.26
PTP4A3-204ENST00000521578 PLTPP55058 493 aa22.94■■□□□ 1.26
PTP4A3-204ENST00000521578 GSCP56915 257 aaPredicted RBP22.94■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms