RNA–Protein interactions for RNA: ENST00000521340.1

HMGN1P28-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 28, humanhuman

BASIC

Gene HMGN1P28, Length 364 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P28-201ENST00000521340 EIF4A1P60842 406 aaKnown RBP3.89□□□□□ -1.79
HMGN1P28-201ENST00000521340 RBM6P78332 1123 aaKnown RBP3.89□□□□□ -1.79
HMGN1P28-201ENST00000521340 PSG6Q00889 435 aa3.89□□□□□ -1.79
HMGN1P28-201ENST00000521340 TP53BP2Q13625 1128 aa3.89□□□□□ -1.79
HMGN1P28-201ENST00000521340 PTPRRQ15256 657 aa3.89□□□□□ -1.79
HMGN1P28-201ENST00000521340 SF3B3Q15393 1217 aaKnown RBP3.89□□□□□ -1.79
HMGN1P28-201ENST00000521340 TBRG1Q3YBR2 411 aa3.89□□□□□ -1.79
HMGN1P28-201ENST00000521340 CTXN3Q4LDR2 81 aa3.89□□□□□ -1.79
HMGN1P28-201ENST00000521340 TREML2Q5T2D2 321 aa3.89□□□□□ -1.79
HMGN1P28-201ENST00000521340 ANKRD45Q5TZF3 282 aa3.89□□□□□ -1.79
HMGN1P28-201ENST00000521340 ACAD10Q6JQN1 1059 aa3.89□□□□□ -1.79
HMGN1P28-201ENST00000521340 ACSM6Q6P461 480 aa3.89□□□□□ -1.79
HMGN1P28-201ENST00000521340 KIAA1324Q6UXG2 1013 aaKnown RBP3.89□□□□□ -1.79
HMGN1P28-201ENST00000521340 H1FNTQ75WM6 255 aaPredicted RBP3.89□□□□□ -1.79
HMGN1P28-201ENST00000521340 FSTL5Q8N475 847 aaPredicted RBP3.89□□□□□ -1.79
HMGN1P28-201ENST00000521340 PTGR2Q8N8N7 351 aaPredicted RBP3.89□□□□□ -1.79
HMGN1P28-201ENST00000521340 SLC16A11Q8NCK7 471 aa3.89□□□□□ -1.79
HMGN1P28-201ENST00000521340 LSM14AQ8ND56 463 aaKnown RBP3.89□□□□□ -1.79
HMGN1P28-201ENST00000521340 LINS1Q8NG48 757 aa3.89□□□□□ -1.79
HMGN1P28-201ENST00000521340 TBC1D22AQ8WUA7 517 aa3.89□□□□□ -1.79
HMGN1P28-201ENST00000521340 HMGB4Q8WW32 186 aa3.89□□□□□ -1.79
HMGN1P28-201ENST00000521340 ASB10Q8WXI3 467 aa3.89□□□□□ -1.79
HMGN1P28-201ENST00000521340 HDAC2Q92769 488 aaKnown RBP3.89□□□□□ -1.79
HMGN1P28-201ENST00000521340 ZUFSPQ96AP4 578 aa3.89□□□□□ -1.79
HMGN1P28-201ENST00000521340 ADOQ96SZ5 270 aa3.89□□□□□ -1.79
HMGN1P28-201ENST00000521340 CLSTN3Q9BQT9 956 aa3.89□□□□□ -1.79
HMGN1P28-201ENST00000521340 FUZQ9BT04 418 aa3.89□□□□□ -1.79
HMGN1P28-201ENST00000521340 TLR8Q9NR97 1041 aaKnown RBP3.89□□□□□ -1.79
HMGN1P28-201ENST00000521340 LIN7CQ9NUP9 197 aaKnown RBP3.89□□□□□ -1.79
HMGN1P28-201ENST00000521340 NKX1-2Q9UD57 310 aaPredicted RBP3.89□□□□□ -1.79
HMGN1P28-201ENST00000521340 HSF4Q9ULV5 492 aa3.89□□□□□ -1.79
HMGN1P28-201ENST00000521340 SH2B3Q9UQQ2 575 aa3.89□□□□□ -1.79
HMGN1P28-201ENST00000521340 PCDHA10Q9Y5I2 948 aa3.89□□□□□ -1.79
HMGN1P28-201ENST00000521340 TRGV11A0A075B6L2 103 aa3.88□□□□□ -1.79
HMGN1P28-201ENST00000521340 CYP3A7-CYP3A51PA0A087WV96 503 aa3.88□□□□□ -1.79
HMGN1P28-201ENST00000521340 MBD3L5A6NJ08 208 aaPredicted RBP3.88□□□□□ -1.79
HMGN1P28-201ENST00000521340 TMEM63AO94886 807 aa3.88□□□□□ -1.79
HMGN1P28-201ENST00000521340 FSHBP01225 129 aa3.88□□□□□ -1.79
HMGN1P28-201ENST00000521340 ELFN1P0C7U0 828 aa3.88□□□□□ -1.79
HMGN1P28-201ENST00000521340 TMEM225BP0DP42 221 aa3.88□□□□□ -1.79
HMGN1P28-201ENST00000521340 CD19P15391 556 aa3.88□□□□□ -1.79
HMGN1P28-201ENST00000521340 ATF7P17544 494 aaPredicted RBP3.88□□□□□ -1.79
HMGN1P28-201ENST00000521340 XBP1P17861 261 aa3.88□□□□□ -1.79
HMGN1P28-201ENST00000521340 SFPQP23246 707 aaKnown RBP eCLIP3.88□□□□□ -1.79
HMGN1P28-201ENST00000521340 CYP3A7P24462 503 aa3.88□□□□□ -1.79
HMGN1P28-201ENST00000521340 NXPH1P58417 271 aa3.88□□□□□ -1.79
HMGN1P28-201ENST00000521340 ITIH3Q06033 890 aa3.88□□□□□ -1.79
HMGN1P28-201ENST00000521340 SEMA3BQ13214 749 aa3.88□□□□□ -1.79
HMGN1P28-201ENST00000521340 PDCLQ13371 301 aa3.88□□□□□ -1.79
HMGN1P28-201ENST00000521340 SLC45A4Q5BKX6 768 aa3.88□□□□□ -1.79
HMGN1P28-201ENST00000521340 CBWD5Q5RIA9 395 aa3.88□□□□□ -1.79
HMGN1P28-201ENST00000521340 FAAH2Q6GMR7 532 aa3.88□□□□□ -1.79
HMGN1P28-201ENST00000521340 DPY19L3Q6ZPD9 716 aa3.88□□□□□ -1.79
HMGN1P28-201ENST00000521340 BRINP3Q76B58 766 aa3.88□□□□□ -1.79
HMGN1P28-201ENST00000521340 SPRED1Q7Z699 444 aa3.88□□□□□ -1.79
HMGN1P28-201ENST00000521340 LINC01465Q8N7H1 131 aa3.88□□□□□ -1.79
HMGN1P28-201ENST00000521340 FAM71DQ8N9W8 422 aa3.88□□□□□ -1.79
HMGN1P28-201ENST00000521340 ANKRD52Q8NB46 1076 aa3.88□□□□□ -1.79
HMGN1P28-201ENST00000521340 CREB3L4Q8TEY5 395 aa3.88□□□□□ -1.79
HMGN1P28-201ENST00000521340 CLEC4CQ8WTT0 213 aa3.88□□□□□ -1.79
HMGN1P28-201ENST00000521340 GLMPQ8WWB7 406 aa3.88□□□□□ -1.79
HMGN1P28-201ENST00000521340 EXTL1Q92935 676 aa3.88□□□□□ -1.79
HMGN1P28-201ENST00000521340 DVL3Q92997 716 aaPredicted RBP3.88□□□□□ -1.79
HMGN1P28-201ENST00000521340 LENG9Q96B70 501 aa3.88□□□□□ -1.79
HMGN1P28-201ENST00000521340 R3HDM4Q96D70 268 aa3.88□□□□□ -1.79
HMGN1P28-201ENST00000521340 C7orf26Q96N11 449 aa3.88□□□□□ -1.79
HMGN1P28-201ENST00000521340 LENG8Q96PV6 779 aaPredicted RBP3.88□□□□□ -1.79
HMGN1P28-201ENST00000521340 CHCHD6Q9BRQ6 235 aa3.88□□□□□ -1.79
HMGN1P28-201ENST00000521340 GATA5Q9BWX5 397 aaPredicted RBP3.88□□□□□ -1.79
HMGN1P28-201ENST00000521340 TPSD1Q9BZJ3 242 aa3.88□□□□□ -1.79
HMGN1P28-201ENST00000521340 BRD8Q9H0E9 1235 aa3.88□□□□□ -1.79
HMGN1P28-201ENST00000521340 ZCWPW1Q9H0M4 648 aa3.88□□□□□ -1.79
HMGN1P28-201ENST00000521340 NOD2Q9HC29 1040 aa3.88□□□□□ -1.79
HMGN1P28-201ENST00000521340 KLC4Q9NSK0 619 aa3.88□□□□□ -1.79
HMGN1P28-201ENST00000521340 SMC4Q9NTJ3 1288 aa3.88□□□□□ -1.79
HMGN1P28-201ENST00000521340 AURKAIP1Q9NWT8 199 aaPredicted RBP3.88□□□□□ -1.79
HMGN1P28-201ENST00000521340 NAALADL1Q9UQQ1 740 aa3.88□□□□□ -1.79
HMGN1P28-201ENST00000521340 UBE2J1Q9Y385 318 aaPredicted RBP3.88□□□□□ -1.79
HMGN1P28-201ENST00000521340 CCDC196A0A1B0GTZ2 297 aa3.87□□□□□ -1.79
HMGN1P28-201ENST00000521340 A0A1W2PPH5 198 aa3.87□□□□□ -1.79
HMGN1P28-201ENST00000521340 PIPSLA2A3N6 862 aa3.87□□□□□ -1.79
HMGN1P28-201ENST00000521340 AGAP5A6NIR3 686 aa3.87□□□□□ -1.79
HMGN1P28-201ENST00000521340 C17orf100A8MU93 164 aa3.87□□□□□ -1.79
HMGN1P28-201ENST00000521340 KLK10O43240 276 aa3.87□□□□□ -1.79
HMGN1P28-201ENST00000521340 CA12O43570 354 aa3.87□□□□□ -1.79
HMGN1P28-201ENST00000521340 PRAMEF2O60811 474 aa3.87□□□□□ -1.79
HMGN1P28-201ENST00000521340 FESP07332 822 aa3.87□□□□□ -1.79
HMGN1P28-201ENST00000521340 DRD1P21728 446 aa3.87□□□□□ -1.79
HMGN1P28-201ENST00000521340 ABCD3P28288 659 aa3.87□□□□□ -1.79
HMGN1P28-201ENST00000521340 AVPR2P30518 371 aa3.87□□□□□ -1.79
HMGN1P28-201ENST00000521340 MAPK4P31152 587 aa3.87□□□□□ -1.79
HMGN1P28-201ENST00000521340 THBS4P35443 961 aa3.87□□□□□ -1.79
HMGN1P28-201ENST00000521340 SELENOPP49908 381 aa3.87□□□□□ -1.79
HMGN1P28-201ENST00000521340 CLCN2P51788 898 aa3.87□□□□□ -1.79
HMGN1P28-201ENST00000521340 RBM5P52756 815 aaKnown RBP eCLIP3.87□□□□□ -1.79
HMGN1P28-201ENST00000521340 DGKQP52824 942 aa3.87□□□□□ -1.79
HMGN1P28-201ENST00000521340 ANKRD1Q15327 319 aa3.87□□□□□ -1.79
HMGN1P28-201ENST00000521340 TBCCQ15814 346 aa3.87□□□□□ -1.79
HMGN1P28-201ENST00000521340 ST3GAL2Q16842 350 aa3.87□□□□□ -1.79
HMGN1P28-201ENST00000521340 TXNRD1Q16881 649 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms