RNA–Protein interactions for RNA: ENST00000521232.1

SQLE-205, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 711 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-205ENST00000521232 PCDHGA5Q9Y5G8 931 aa17.81■□□□□ 0.44
SQLE-205ENST00000521232 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.81■□□□□ 0.44
SQLE-205ENST00000521232 THADAQ6YHU6 1953 aa17.8■□□□□ 0.44
SQLE-205ENST00000521232 BECN2A8MW95 431 aa17.8■□□□□ 0.44
SQLE-205ENST00000521232 LETM1O95202 739 aaPredicted RBP17.8■□□□□ 0.44
SQLE-205ENST00000521232 LATS1O95835 1130 aa17.8■□□□□ 0.44
SQLE-205ENST00000521232 LTFP02788 710 aa17.8■□□□□ 0.44
SQLE-205ENST00000521232 CYBBP04839 570 aa17.8■□□□□ 0.44
SQLE-205ENST00000521232 ACADSBP45954 432 aa17.8■□□□□ 0.44
SQLE-205ENST00000521232 FOXK2Q01167 660 aa17.8■□□□□ 0.44
SQLE-205ENST00000521232 ELF2Q15723 593 aa17.8■□□□□ 0.44
SQLE-205ENST00000521232 MAN2A1Q16706 1144 aa17.8■□□□□ 0.44
SQLE-205ENST00000521232 EGFLAMQ63HQ2 1017 aa17.8■□□□□ 0.44
SQLE-205ENST00000521232 DENND1BQ6P3S1 775 aa17.8■□□□□ 0.44
SQLE-205ENST00000521232 PRR23CQ6ZRP0 262 aa17.8■□□□□ 0.44
SQLE-205ENST00000521232 SCUBE3Q8IX30 993 aa17.8■□□□□ 0.44
SQLE-205ENST00000521232 CLEC4CQ8WTT0 213 aa17.8■□□□□ 0.44
SQLE-205ENST00000521232 SLC4A5Q9BY07 1137 aa17.8■□□□□ 0.44
SQLE-205ENST00000521232 INVSQ9Y283 1065 aa17.8■□□□□ 0.44
SQLE-205ENST00000521232 A0A1W2PQF6 199 aa17.79■□□□□ 0.44
SQLE-205ENST00000521232 GFRA2O00451 464 aa17.79■□□□□ 0.44
SQLE-205ENST00000521232 FYNP06241 537 aa17.79■□□□□ 0.44
SQLE-205ENST00000521232 ZNF806P0C7X5 589 aa17.79■□□□□ 0.44
SQLE-205ENST00000521232 GNA15P30679 374 aa17.79■□□□□ 0.44
SQLE-205ENST00000521232 APBA1Q02410 837 aa17.79■□□□□ 0.44
SQLE-205ENST00000521232 ARHGAP44Q17R89 818 aa17.79■□□□□ 0.44
SQLE-205ENST00000521232 MPPE1Q53F39 396 aa17.79■□□□□ 0.44
SQLE-205ENST00000521232 PLA2G2CQ5R387 149 aa17.79■□□□□ 0.44
SQLE-205ENST00000521232 SDE2Q6IQ49 451 aa17.79■□□□□ 0.44
SQLE-205ENST00000521232 TMEM110Q86TL2 294 aa17.79■□□□□ 0.44
SQLE-205ENST00000521232 CHPFQ8IZ52 775 aa17.79■□□□□ 0.44
SQLE-205ENST00000521232 SHC3Q92529 594 aa17.79■□□□□ 0.44
SQLE-205ENST00000521232 GOLGA1Q92805 767 aa17.79■□□□□ 0.44
SQLE-205ENST00000521232 PIWIL1Q96J94 861 aaKnown RBP17.79■□□□□ 0.44
SQLE-205ENST00000521232 ACOX2Q99424 681 aa17.79■□□□□ 0.44
SQLE-205ENST00000521232 GABRG3Q99928 467 aa17.79■□□□□ 0.44
SQLE-205ENST00000521232 SLC2A11Q9BYW1 496 aa17.79■□□□□ 0.44
SQLE-205ENST00000521232 MIS12Q9H081 205 aa17.79■□□□□ 0.44
SQLE-205ENST00000521232 NDST4Q9H3R1 872 aa17.79■□□□□ 0.44
SQLE-205ENST00000521232 CD248Q9HCU0 757 aa17.79■□□□□ 0.44
SQLE-205ENST00000521232 SIX2Q9NPC8 291 aa17.79■□□□□ 0.44
SQLE-205ENST00000521232 ACP6Q9NPH0 428 aa17.79■□□□□ 0.44
SQLE-205ENST00000521232 GON4LQ3T8J9 2241 aa17.79■□□□□ 0.44
SQLE-205ENST00000521232 NUP205Q92621 2012 aa17.78■□□□□ 0.44
SQLE-205ENST00000521232 TCRBV21S2A2A0A5A6 115 aa17.78■□□□□ 0.44
SQLE-205ENST00000521232 SART1O43290 800 aaKnown RBP17.78■□□□□ 0.44
SQLE-205ENST00000521232 MSI1O43347 362 aaKnown RBP17.78■□□□□ 0.44
SQLE-205ENST00000521232 THAP12O43422 761 aa17.78■□□□□ 0.44
SQLE-205ENST00000521232 IGLV3-27P01718 113 aa17.78■□□□□ 0.44
SQLE-205ENST00000521232 HOXB2P14652 356 aa17.78■□□□□ 0.44
SQLE-205ENST00000521232 GBP1P32455 592 aa17.78■□□□□ 0.44
SQLE-205ENST00000521232 P2RY2P41231 377 aa17.78■□□□□ 0.44
SQLE-205ENST00000521232 WASP42768 502 aa17.78■□□□□ 0.44
SQLE-205ENST00000521232 ATXN1P54253 815 aaKnown RBP17.78■□□□□ 0.44
SQLE-205ENST00000521232 ZNF445P59923 1031 aa17.78■□□□□ 0.44
SQLE-205ENST00000521232 RING1Q06587 406 aa17.78■□□□□ 0.44
SQLE-205ENST00000521232 VWA3BQ502W6 1294 aa17.78■□□□□ 0.44
SQLE-205ENST00000521232 MIIPQ5JXC2 388 aa17.78■□□□□ 0.44
SQLE-205ENST00000521232 ADGRF1Q5T601 910 aa17.78■□□□□ 0.44
SQLE-205ENST00000521232 PMS2CLQ68D20 193 aa17.78■□□□□ 0.44
SQLE-205ENST00000521232 DPY19L2P1Q6NXN4 242 aa17.78■□□□□ 0.44
SQLE-205ENST00000521232 BEND5Q7L4P6 421 aa17.78■□□□□ 0.44
SQLE-205ENST00000521232 DDI1Q8WTU0 396 aa17.78■□□□□ 0.44
SQLE-205ENST00000521232 HMGB4Q8WW32 186 aa17.78■□□□□ 0.44
SQLE-205ENST00000521232 AZIN2Q96A70 460 aa17.78■□□□□ 0.44
SQLE-205ENST00000521232 TUBGCP2Q9BSJ2 902 aa17.78■□□□□ 0.44
SQLE-205ENST00000521232 ST7Q9NRC1 585 aa17.78■□□□□ 0.44
SQLE-205ENST00000521232 BCCIPQ9P287 314 aaKnown RBP eCLIP17.78■□□□□ 0.44
SQLE-205ENST00000521232 CYTH4Q9UIA0 394 aa17.78■□□□□ 0.44
SQLE-205ENST00000521232 CLEC4EQ9ULY5 219 aa17.78■□□□□ 0.44
SQLE-205ENST00000521232 PLXND1Q9Y4D7 1925 aa17.77■□□□□ 0.44
SQLE-205ENST00000521232 NPC1O15118 1278 aa17.77■□□□□ 0.44
SQLE-205ENST00000521232 NCAM1P13591 858 aa17.77■□□□□ 0.44
SQLE-205ENST00000521232 PRKCSHP14314 528 aaPredicted RBP17.77■□□□□ 0.44
SQLE-205ENST00000521232 USP8P40818 1118 aa17.77■□□□□ 0.44
SQLE-205ENST00000521232 BYSLQ13895 437 aaKnown RBP17.77■□□□□ 0.44
SQLE-205ENST00000521232 GEN1Q17RS7 908 aa17.77■□□□□ 0.44
SQLE-205ENST00000521232 MAP7D1Q3KQU3 841 aa17.77■□□□□ 0.44
SQLE-205ENST00000521232 DGLUCYQ7Z3D6 616 aa17.77■□□□□ 0.44
SQLE-205ENST00000521232 UNC45BQ8IWX7 931 aa17.77■□□□□ 0.44
SQLE-205ENST00000521232 NETO1Q8TDF5 533 aa17.77■□□□□ 0.44
SQLE-205ENST00000521232 IRX2Q9BZI1 471 aaPredicted RBP17.77■□□□□ 0.44
SQLE-205ENST00000521232 DNAJC12Q9UKB3 198 aa17.77■□□□□ 0.44
SQLE-205ENST00000521232 CDV3Q9UKY7 258 aaKnown RBP17.77■□□□□ 0.44
SQLE-205ENST00000521232 BCLAF3A2AJT9 711 aaKnown RBP17.76■□□□□ 0.43
SQLE-205ENST00000521232 PAPSS1O43252 624 aaPredicted RBP17.76■□□□□ 0.43
SQLE-205ENST00000521232 GABRG2P18507 467 aa17.76■□□□□ 0.43
SQLE-205ENST00000521232 BCKDHBP21953 392 aa17.76■□□□□ 0.43
SQLE-205ENST00000521232 HOXD9P28356 352 aaPredicted RBP17.76■□□□□ 0.43
SQLE-205ENST00000521232 MPLP40238 635 aa17.76■□□□□ 0.43
SQLE-205ENST00000521232 TBX4P57082 545 aa17.76■□□□□ 0.43
SQLE-205ENST00000521232 CCDC6Q16204 474 aa17.76■□□□□ 0.43
SQLE-205ENST00000521232 NUGGCQ68CJ6 796 aa17.76■□□□□ 0.43
SQLE-205ENST00000521232 RBM43Q6ZSC3 357 aaKnown RBP17.76■□□□□ 0.43
SQLE-205ENST00000521232 PGBD3Q8N328 593 aa17.76■□□□□ 0.43
SQLE-205ENST00000521232 WDTC1Q8N5D0 677 aa17.76■□□□□ 0.43
SQLE-205ENST00000521232 GPT2Q8TD30 523 aa17.76■□□□□ 0.43
SQLE-205ENST00000521232 IPO4Q8TEX9 1081 aaKnown RBP17.76■□□□□ 0.43
SQLE-205ENST00000521232 RLN3Q8WXF3 142 aa17.76■□□□□ 0.43
SQLE-205ENST00000521232 TMA16Q96EY4 203 aaKnown RBP17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms