RNA–Protein interactions for RNA: ENST00000519587.1

SDC2-203, Transcript of syndecan 2, humanhuman

TSL 4

Gene SDC2, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-203ENST00000519587 SLC46A2Q9BY10 475 aa14.72□□□□□ -0.05
SDC2-203ENST00000519587 TRIM7Q9C029 511 aa14.72□□□□□ -0.05
SDC2-203ENST00000519587 POMKQ9H5K3 350 aa14.72□□□□□ -0.05
SDC2-203ENST00000519587 KCND1Q9NSA2 647 aa14.72□□□□□ -0.05
SDC2-203ENST00000519587 TRMT1Q9NXH9 659 aaKnown RBP14.72□□□□□ -0.05
SDC2-203ENST00000519587 COX16Q9P0S2 106 aa14.72□□□□□ -0.05
SDC2-203ENST00000519587 TRIM10Q9UDY6 481 aa14.72□□□□□ -0.05
SDC2-203ENST00000519587 CDH22Q9UJ99 828 aa14.72□□□□□ -0.05
SDC2-203ENST00000519587 LSM7Q9UK45 103 aaKnown RBP14.72□□□□□ -0.05
SDC2-203ENST00000519587 USTQ9Y2C2 406 aa14.72□□□□□ -0.05
SDC2-203ENST00000519587 CPQQ9Y646 472 aa14.72□□□□□ -0.05
SDC2-203ENST00000519587 DUSP10Q9Y6W6 482 aa14.72□□□□□ -0.05
SDC2-203ENST00000519587 GRXCR2A6NFK2 248 aa14.71□□□□□ -0.05
SDC2-203ENST00000519587 MDM4O15151 490 aa14.71□□□□□ -0.05
SDC2-203ENST00000519587 MSI1O43347 362 aaKnown RBP14.71□□□□□ -0.05
SDC2-203ENST00000519587 BUB1O43683 1085 aa14.71□□□□□ -0.05
SDC2-203ENST00000519587 SPOPO43791 374 aa14.71□□□□□ -0.05
SDC2-203ENST00000519587 PRPSAP2O60256 369 aa14.71□□□□□ -0.05
SDC2-203ENST00000519587 KIF5CO60282 957 aa14.71□□□□□ -0.05
SDC2-203ENST00000519587 BUB1BO60566 1050 aaPredicted RBP14.71□□□□□ -0.05
SDC2-203ENST00000519587 TBX18O95935 607 aa14.71□□□□□ -0.05
SDC2-203ENST00000519587 PCK1P35558 622 aa14.71□□□□□ -0.05
SDC2-203ENST00000519587 SSR1P43307 286 aaKnown RBP14.71□□□□□ -0.05
SDC2-203ENST00000519587 HARS2P49590 506 aaKnown RBP14.71□□□□□ -0.05
SDC2-203ENST00000519587 OGDHQ02218 1023 aa14.71□□□□□ -0.05
SDC2-203ENST00000519587 ZNF252P-AS1Q0IIN9 211 aa14.71□□□□□ -0.05
SDC2-203ENST00000519587 PPP2R5DQ14738 602 aa14.71□□□□□ -0.05
SDC2-203ENST00000519587 HADHQ16836 314 aaKnown RBP14.71□□□□□ -0.05
SDC2-203ENST00000519587 C15orf59Q2T9L4 293 aaPredicted RBP14.71□□□□□ -0.05
SDC2-203ENST00000519587 ARL13BQ3SXY8 428 aa14.71□□□□□ -0.05
SDC2-203ENST00000519587 BRMS1LQ5PSV4 323 aa14.71□□□□□ -0.05
SDC2-203ENST00000519587 UNC45BQ8IWX7 931 aa14.71□□□□□ -0.05
SDC2-203ENST00000519587 TDRD5Q8NAT2 981 aaKnown RBP14.71□□□□□ -0.05
SDC2-203ENST00000519587 TRIM58Q8NG06 486 aa14.71□□□□□ -0.05
SDC2-203ENST00000519587 ADAM32Q8TC27 787 aa14.71□□□□□ -0.05
SDC2-203ENST00000519587 KIAA1524Q8TCG1 905 aa14.71□□□□□ -0.05
SDC2-203ENST00000519587 UBE2Q2Q8WVN8 375 aa14.71□□□□□ -0.05
SDC2-203ENST00000519587 CENPIQ92674 756 aaPredicted RBP14.71□□□□□ -0.05
SDC2-203ENST00000519587 SMARCD2Q92925 531 aa14.71□□□□□ -0.05
SDC2-203ENST00000519587 E2F7Q96AV8 911 aa14.71□□□□□ -0.05
SDC2-203ENST00000519587 BTBD6Q96KE9 485 aa14.71□□□□□ -0.05
SDC2-203ENST00000519587 DCLK3Q9C098 648 aa14.71□□□□□ -0.05
SDC2-203ENST00000519587 TDP1Q9NUW8 608 aa14.71□□□□□ -0.05
SDC2-203ENST00000519587 SMPD4Q9NXE4 827 aa14.71□□□□□ -0.05
SDC2-203ENST00000519587 SFMBT1Q9UHJ3 866 aa14.71□□□□□ -0.05
SDC2-203ENST00000519587 SLC12A6Q9UHW9 1150 aa14.71□□□□□ -0.05
SDC2-203ENST00000519587 NR2E1Q9Y466 385 aa14.71□□□□□ -0.05
SDC2-203ENST00000519587 MUC6Q6W4X9 2439 aa14.7□□□□□ -0.06
SDC2-203ENST00000519587 ENDOD1O94919 500 aa14.7□□□□□ -0.06
SDC2-203ENST00000519587 MOCS3O95396 460 aa14.7□□□□□ -0.06
SDC2-203ENST00000519587 IGLV3-27P01718 113 aa14.7□□□□□ -0.06
SDC2-203ENST00000519587 CXCR3P49682 368 aa14.7□□□□□ -0.06
SDC2-203ENST00000519587 AIF1P55008 147 aa14.7□□□□□ -0.06
SDC2-203ENST00000519587 PITX1P78337 314 aaPredicted RBP14.7□□□□□ -0.06
SDC2-203ENST00000519587 SMAD2Q15796 467 aaKnown RBP14.7□□□□□ -0.06
SDC2-203ENST00000519587 ACBD5Q5T8D3 534 aaPredicted RBP14.7□□□□□ -0.06
SDC2-203ENST00000519587 OTUD1Q5VV17 481 aaPredicted RBP14.7□□□□□ -0.06
SDC2-203ENST00000519587 PTCRAQ6ISU1 281 aaPredicted RBP14.7□□□□□ -0.06
SDC2-203ENST00000519587 MTSS1LQ765P7 747 aa14.7□□□□□ -0.06
SDC2-203ENST00000519587 BNIPLQ7Z465 357 aa14.7□□□□□ -0.06
SDC2-203ENST00000519587 CELF5Q8N6W0 485 aaKnown RBP14.7□□□□□ -0.06
SDC2-203ENST00000519587 SLC22A12Q96S37 553 aa14.7□□□□□ -0.06
SDC2-203ENST00000519587 KLF16Q9BXK1 252 aaPredicted RBP14.7□□□□□ -0.06
SDC2-203ENST00000519587 RNF38Q9H0F5 515 aa14.7□□□□□ -0.06
SDC2-203ENST00000519587 PIGVQ9NUD9 493 aa14.7□□□□□ -0.06
SDC2-203ENST00000519587 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.7□□□□□ -0.06
SDC2-203ENST00000519587 SH3BP1Q9Y3L3 701 aa14.7□□□□□ -0.06
SDC2-203ENST00000519587 A0A0U1RQJ8 604 aa14.69□□□□□ -0.06
SDC2-203ENST00000519587 GRID2IPA4D2P6 1211 aa14.69□□□□□ -0.06
SDC2-203ENST00000519587 NRG2O14511 850 aaPredicted RBP14.69□□□□□ -0.06
SDC2-203ENST00000519587 LRCH4O75427 683 aa14.69□□□□□ -0.06
SDC2-203ENST00000519587 LATS1O95835 1130 aa14.69□□□□□ -0.06
SDC2-203ENST00000519587 HMBSP08397 361 aa14.69□□□□□ -0.06
SDC2-203ENST00000519587 IRF1P10914 325 aa14.69□□□□□ -0.06
SDC2-203ENST00000519587 TCF3P15923 654 aa14.69□□□□□ -0.06
SDC2-203ENST00000519587 TFE3P19532 575 aaPredicted RBP14.69□□□□□ -0.06
SDC2-203ENST00000519587 SLC11A2P49281 568 aa14.69□□□□□ -0.06
SDC2-203ENST00000519587 HDAC4P56524 1084 aa14.69□□□□□ -0.06
SDC2-203ENST00000519587 USP4Q13107 963 aa14.69□□□□□ -0.06
SDC2-203ENST00000519587 SCYL2Q6P3W7 929 aa14.69□□□□□ -0.06
SDC2-203ENST00000519587 ARID3BQ8IVW6 561 aaPredicted RBP14.69□□□□□ -0.06
SDC2-203ENST00000519587 REXO1L1PQ8IX06 675 aa14.69□□□□□ -0.06
SDC2-203ENST00000519587 KIAA1958Q8N8K9 716 aa14.69□□□□□ -0.06
SDC2-203ENST00000519587 ATP6V0D2Q8N8Y2 350 aa14.69□□□□□ -0.06
SDC2-203ENST00000519587 ATRIPQ8WXE1 791 aa14.69□□□□□ -0.06
SDC2-203ENST00000519587 USP13Q92995 863 aaPredicted RBP14.69□□□□□ -0.06
SDC2-203ENST00000519587 ASB16Q96NS5 453 aa14.69□□□□□ -0.06
SDC2-203ENST00000519587 MYADMQ96S97 322 aa14.69□□□□□ -0.06
SDC2-203ENST00000519587 CYP2S1Q96SQ9 504 aa14.69□□□□□ -0.06
SDC2-203ENST00000519587 PHF7Q9BWX1 381 aaPredicted RBP14.69□□□□□ -0.06
SDC2-203ENST00000519587 WDCPQ9H6R7 721 aa14.69□□□□□ -0.06
SDC2-203ENST00000519587 TRPV4Q9HBA0 871 aa14.69□□□□□ -0.06
SDC2-203ENST00000519587 OBP2AQ9NY56 170 aa14.69□□□□□ -0.06
SDC2-203ENST00000519587 CFAP97Q9P2B7 532 aa14.69□□□□□ -0.06
SDC2-203ENST00000519587 SALL4Q9UJQ4 1053 aa14.69□□□□□ -0.06
SDC2-203ENST00000519587 ZNF510Q9Y2H8 683 aa14.69□□□□□ -0.06
SDC2-203ENST00000519587 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.69□□□□□ -0.06
SDC2-203ENST00000519587 E2F8A0AVK6 867 aa14.68□□□□□ -0.06
SDC2-203ENST00000519587 LEFTY2O00292 366 aa14.68□□□□□ -0.06
SDC2-203ENST00000519587 SLC9A3R1O14745 358 aaPredicted RBP14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms