RNA–Protein interactions for RNA: ENST00000519553.1

PTPN12-213, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-213ENST00000519553 DNAJC10Q8IXB1 793 aa7.05□□□□□ -1.28
PTPN12-213ENST00000519553 NRSN1Q8IZ57 195 aa7.05□□□□□ -1.28
PTPN12-213ENST00000519553 SEMA6DQ8NFY4 1073 aa7.05□□□□□ -1.28
PTPN12-213ENST00000519553 ADAMTS18Q8TE60 1221 aa7.05□□□□□ -1.28
PTPN12-213ENST00000519553 SLC22A17Q8WUG5 538 aa7.05□□□□□ -1.28
PTPN12-213ENST00000519553 FYTTD1Q96QD9 318 aaKnown RBP7.05□□□□□ -1.28
PTPN12-213ENST00000519553 ABHD10Q9NUJ1 306 aa7.05□□□□□ -1.28
PTPN12-213ENST00000519553 FAM90A18PA6NE21 464 aa7.04□□□□□ -1.28
PTPN12-213ENST00000519553 FAM90A16PA6NEW6 464 aa7.04□□□□□ -1.28
PTPN12-213ENST00000519553 FAM90A9PA6NNJ1 464 aa7.04□□□□□ -1.28
PTPN12-213ENST00000519553 FAM90A5PA8MXJ8 464 aa7.04□□□□□ -1.28
PTPN12-213ENST00000519553 CLIC1O00299 241 aa7.04□□□□□ -1.28
PTPN12-213ENST00000519553 GCATO75600 419 aa7.04□□□□□ -1.28
PTPN12-213ENST00000519553 CHRM5P08912 532 aaPredicted RBP7.04□□□□□ -1.28
PTPN12-213ENST00000519553 FAM90A15PP0C7V4 464 aa7.04□□□□□ -1.28
PTPN12-213ENST00000519553 FAM90A14PP0C7W9 464 aa7.04□□□□□ -1.28
PTPN12-213ENST00000519553 GYS1P13807 737 aa7.04□□□□□ -1.28
PTPN12-213ENST00000519553 AKT1P31749 480 aa7.04□□□□□ -1.28
PTPN12-213ENST00000519553 JAK3P52333 1124 aa7.04□□□□□ -1.28
PTPN12-213ENST00000519553 KCNB1Q14721 858 aa7.04□□□□□ -1.28
PTPN12-213ENST00000519553 TANGO2Q6ICL3 276 aa7.04□□□□□ -1.28
PTPN12-213ENST00000519553 ACSM6Q6P461 480 aa7.04□□□□□ -1.28
PTPN12-213ENST00000519553 TMEM65Q6PI78 240 aa7.04□□□□□ -1.28
PTPN12-213ENST00000519553 TRABD2AQ86V40 505 aa7.04□□□□□ -1.28
PTPN12-213ENST00000519553 TTC30AQ86WT1 665 aa7.04□□□□□ -1.28
PTPN12-213ENST00000519553 PNLDC1Q8NA58 520 aaKnown RBP7.04□□□□□ -1.28
PTPN12-213ENST00000519553 NPIPB3Q92617 1050 aa7.04□□□□□ -1.28
PTPN12-213ENST00000519553 RSC1A1Q92681 617 aa7.04□□□□□ -1.28
PTPN12-213ENST00000519553 HS6ST2Q96MM7 605 aa7.04□□□□□ -1.28
PTPN12-213ENST00000519553 VPS4AQ9UN37 437 aa7.04□□□□□ -1.28
PTPN12-213ENST00000519553 LOC105369274A0A096LPK9 316 aa7.03□□□□□ -1.28
PTPN12-213ENST00000519553 LOC102723532A0A0G2JNH3 316 aa7.03□□□□□ -1.28
PTPN12-213ENST00000519553 LATS1O95835 1130 aa7.03□□□□□ -1.28
PTPN12-213ENST00000519553 PRKCGP05129 697 aa7.03□□□□□ -1.28
PTPN12-213ENST00000519553 ITGA2BP08514 1039 aa7.03□□□□□ -1.28
PTPN12-213ENST00000519553 MMP8P22894 467 aa7.03□□□□□ -1.28
PTPN12-213ENST00000519553 WDR5P61964 334 aaKnown RBP7.03□□□□□ -1.28
PTPN12-213ENST00000519553 TUBA4AP68366 448 aa7.03□□□□□ -1.28
PTPN12-213ENST00000519553 BTBD16Q32M84 506 aa7.03□□□□□ -1.28
PTPN12-213ENST00000519553 TMEM63BQ5T3F8 832 aa7.03□□□□□ -1.28
PTPN12-213ENST00000519553 PTF1AQ7RTS3 328 aa7.03□□□□□ -1.28
PTPN12-213ENST00000519553 KRT27Q7Z3Y8 459 aa7.03□□□□□ -1.28
PTPN12-213ENST00000519553 OR4N4Q8N0Y3 316 aa7.03□□□□□ -1.28
PTPN12-213ENST00000519553 PNISRQ8TF01 805 aaKnown RBP7.03□□□□□ -1.28
PTPN12-213ENST00000519553 ZNF764Q96H86 408 aaPredicted RBP7.03□□□□□ -1.28
PTPN12-213ENST00000519553 CCDC17Q96LX7 622 aa7.03□□□□□ -1.28
PTPN12-213ENST00000519553 CRAMP1Q96RY5 1269 aa7.03□□□□□ -1.28
PTPN12-213ENST00000519553 EIF3CQ99613 913 aaKnown RBP7.03□□□□□ -1.28
PTPN12-213ENST00000519553 CDCP1Q9H5V8 836 aa7.03□□□□□ -1.28
PTPN12-213ENST00000519553 PRDM8Q9NQV8 689 aa7.03□□□□□ -1.28
PTPN12-213ENST00000519553 UBE2J1Q9Y385 318 aaPredicted RBP7.03□□□□□ -1.28
PTPN12-213ENST00000519553 PRRT4C9JH25 899 aa7.02□□□□□ -1.29
PTPN12-213ENST00000519553 UBE2Q2LH0YL09 131 aa7.02□□□□□ -1.29
PTPN12-213ENST00000519553 M0QYT0 321 aa7.02□□□□□ -1.29
PTPN12-213ENST00000519553 NBNO60934 754 aa7.02□□□□□ -1.29
PTPN12-213ENST00000519553 CYP2D6P10635 497 aa7.02□□□□□ -1.29
PTPN12-213ENST00000519553 CYP2A6P11509 494 aaPredicted RBP7.02□□□□□ -1.29
PTPN12-213ENST00000519553 MATN1P21941 496 aa7.02□□□□□ -1.29
PTPN12-213ENST00000519553 DUSP1P28562 367 aa7.02□□□□□ -1.29
PTPN12-213ENST00000519553 SLC14A1Q13336 389 aa7.02□□□□□ -1.29
PTPN12-213ENST00000519553 C4orf46Q504U0 113 aa7.02□□□□□ -1.29
PTPN12-213ENST00000519553 SULT6B1Q6IMI4 303 aa7.02□□□□□ -1.29
PTPN12-213ENST00000519553 ZNF66Q6ZN08 573 aa7.02□□□□□ -1.29
PTPN12-213ENST00000519553 MYCT1Q8N699 235 aa7.02□□□□□ -1.29
PTPN12-213ENST00000519553 OR52L2PQ8NGH6 319 aa7.02□□□□□ -1.29
PTPN12-213ENST00000519553 WDR60Q8WVS4 1066 aa7.02□□□□□ -1.29
PTPN12-213ENST00000519553 GLMPQ8WWB7 406 aa7.02□□□□□ -1.29
PTPN12-213ENST00000519553 HIC2Q96JB3 615 aa7.02□□□□□ -1.29
PTPN12-213ENST00000519553 ASB2Q96Q27 587 aa7.02□□□□□ -1.29
PTPN12-213ENST00000519553 RTKNQ9BST9 563 aa7.02□□□□□ -1.29
PTPN12-213ENST00000519553 PABPC3Q9H361 631 aaKnown RBP7.02□□□□□ -1.29
PTPN12-213ENST00000519553 MLXIPQ9HAP2 919 aa7.02□□□□□ -1.29
PTPN12-213ENST00000519553 HERC5Q9UII4 1024 aaKnown RBP7.02□□□□□ -1.29
PTPN12-213ENST00000519553 PCDHB7Q9Y5E2 793 aa7.02□□□□□ -1.29
PTPN12-213ENST00000519553 SPATA31A1Q5TZJ5 1347 aa7.01□□□□□ -1.29
PTPN12-213ENST00000519553 KIF28PB7ZC32 967 aa7.01□□□□□ -1.29
PTPN12-213ENST00000519553 ACTL6BO94805 426 aa7.01□□□□□ -1.29
PTPN12-213ENST00000519553 GAB1Q13480 694 aa7.01□□□□□ -1.29
PTPN12-213ENST00000519553 JMJD6Q6NYC1 403 aaPredicted RBP7.01□□□□□ -1.29
PTPN12-213ENST00000519553 SLC44A2Q8IWA5 706 aaPredicted RBP7.01□□□□□ -1.29
PTPN12-213ENST00000519553 NKAPQ8N5F7 415 aaKnown RBP7.01□□□□□ -1.29
PTPN12-213ENST00000519553 C8orf58Q8NAV2 365 aa7.01□□□□□ -1.29
PTPN12-213ENST00000519553 SCAMP5Q8TAC9 235 aa7.01□□□□□ -1.29
PTPN12-213ENST00000519553 SORBS1Q9BX66 1292 aaKnown RBP7.01□□□□□ -1.29
PTPN12-213ENST00000519553 TMEM120AQ9BXJ8 343 aa7.01□□□□□ -1.29
PTPN12-213ENST00000519553 ADGRE3Q9BY15 652 aa7.01□□□□□ -1.29
PTPN12-213ENST00000519553 RNF26Q9BY78 433 aaPredicted RBP7.01□□□□□ -1.29
PTPN12-213ENST00000519553 AGO4Q9HCK5 861 aaKnown RBP7.01□□□□□ -1.29
PTPN12-213ENST00000519553 FBXO28Q9NVF7 368 aa7.01□□□□□ -1.29
PTPN12-213ENST00000519553 CNTN6Q9UQ52 1028 aa7.01□□□□□ -1.29
PTPN12-213ENST00000519553 LOC105378220A0A1B0GUY1 285 aaPredicted RBP7□□□□□ -1.29
PTPN12-213ENST00000519553 C16orf96A6NNT2 1141 aa7□□□□□ -1.29
PTPN12-213ENST00000519553 FAM3BP58499 235 aaPredicted RBP7□□□□□ -1.29
PTPN12-213ENST00000519553 SLC10A2Q12908 348 aaPredicted RBP7□□□□□ -1.29
PTPN12-213ENST00000519553 SEC23BQ15437 767 aa7□□□□□ -1.29
PTPN12-213ENST00000519553 PDCD2Q16342 344 aaPredicted RBP7□□□□□ -1.29
PTPN12-213ENST00000519553 AAK1Q2M2I8 961 aa7□□□□□ -1.29
PTPN12-213ENST00000519553 CERKLQ49MI3 558 aaPredicted RBP7□□□□□ -1.29
PTPN12-213ENST00000519553 VSTM1Q6UX27 236 aa7□□□□□ -1.29
PTPN12-213ENST00000519553 KYAT3Q6YP21 454 aaKnown RBP7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms