RNA–Protein interactions for RNA: ENST00000517490.5

CPNE3-203, Transcript of copine 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE3, Length 4,865 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-203ENST00000517490 AP4B1Q9Y6B7 739 aa6.86□□□□□ -1.31
CPNE3-203ENST00000517490 E2F8A0AVK6 867 aa6.86□□□□□ -1.31
CPNE3-203ENST00000517490 PGAM1P18669 254 aa6.86□□□□□ -1.31
CPNE3-203ENST00000517490 DSG3P32926 999 aa6.86□□□□□ -1.31
CPNE3-203ENST00000517490 PTPN7P35236 360 aa6.86□□□□□ -1.31
CPNE3-203ENST00000517490 RGS7P49802 495 aa6.86□□□□□ -1.31
CPNE3-203ENST00000517490 MRPS22P82650 360 aaKnown RBP6.86□□□□□ -1.31
CPNE3-203ENST00000517490 PLOD1Q02809 727 aaPredicted RBP6.86□□□□□ -1.31
CPNE3-203ENST00000517490 BRSK2Q8IWQ3 736 aa6.86□□□□□ -1.31
CPNE3-203ENST00000517490 MCUQ8NE86 351 aa6.86□□□□□ -1.31
CPNE3-203ENST00000517490 TSPAN14Q8NG11 270 aa6.86□□□□□ -1.31
CPNE3-203ENST00000517490 UBA3Q8TBC4 463 aa6.86□□□□□ -1.31
CPNE3-203ENST00000517490 DCAKDQ8WVC6 231 aa6.86□□□□□ -1.31
CPNE3-203ENST00000517490 RXFP2Q8WXD0 754 aa6.86□□□□□ -1.31
CPNE3-203ENST00000517490 PDCD2LQ9BRP1 358 aa6.86□□□□□ -1.31
CPNE3-203ENST00000517490 RTKNQ9BST9 563 aa6.86□□□□□ -1.31
CPNE3-203ENST00000517490 C1orf21Q9H246 121 aa6.86□□□□□ -1.31
CPNE3-203ENST00000517490 ACAD9Q9H845 621 aa6.86□□□□□ -1.31
CPNE3-203ENST00000517490 PLGRKTQ9HBL7 147 aa6.86□□□□□ -1.31
CPNE3-203ENST00000517490 ITGB1BP2Q9UKP3 347 aa6.86□□□□□ -1.31
CPNE3-203ENST00000517490 GINS2Q9Y248 185 aa6.86□□□□□ -1.31
CPNE3-203ENST00000517490 PCDHA11Q9Y5I1 949 aa6.86□□□□□ -1.31
CPNE3-203ENST00000517490 ATP9BO43861 1147 aa6.85□□□□□ -1.31
CPNE3-203ENST00000517490 TBC1D12O60347 775 aa6.85□□□□□ -1.31
CPNE3-203ENST00000517490 CRABP2P29373 138 aa6.85□□□□□ -1.31
CPNE3-203ENST00000517490 HOXA10P31260 410 aaPredicted RBP6.85□□□□□ -1.31
CPNE3-203ENST00000517490 PCYT1AP49585 367 aa6.85□□□□□ -1.31
CPNE3-203ENST00000517490 STAT5BP51692 787 aa6.85□□□□□ -1.31
CPNE3-203ENST00000517490 PRKAA1Q13131 559 aa6.85□□□□□ -1.31
CPNE3-203ENST00000517490 PGM5Q15124 567 aa6.85□□□□□ -1.31
CPNE3-203ENST00000517490 TATDN1Q6P1N9 297 aa6.85□□□□□ -1.31
CPNE3-203ENST00000517490 ZBTB49Q6ZSB9 765 aa6.85□□□□□ -1.31
CPNE3-203ENST00000517490 ARMCX2Q7L311 632 aa6.85□□□□□ -1.31
CPNE3-203ENST00000517490 NT5C1AQ9BXI3 368 aa6.85□□□□□ -1.31
CPNE3-203ENST00000517490 LRRC40Q9H9A6 602 aa6.85□□□□□ -1.31
CPNE3-203ENST00000517490 PIDD1Q9HB75 910 aa6.85□□□□□ -1.31
CPNE3-203ENST00000517490 AKT3Q9Y243 479 aa6.85□□□□□ -1.31
CPNE3-203ENST00000517490 PLCH1Q4KWH8 1693 aa6.85□□□□□ -1.31
CPNE3-203ENST00000517490 PSMD3O43242 534 aa6.85□□□□□ -1.31
CPNE3-203ENST00000517490 RAD17O75943 681 aa6.85□□□□□ -1.31
CPNE3-203ENST00000517490 ITGB5P18084 799 aa6.85□□□□□ -1.31
CPNE3-203ENST00000517490 PRDX6P30041 224 aa6.85□□□□□ -1.31
CPNE3-203ENST00000517490 NEK3P51956 506 aa6.85□□□□□ -1.31
CPNE3-203ENST00000517490 RBP5P82980 135 aa6.85□□□□□ -1.31
CPNE3-203ENST00000517490 TSPY1Q01534 308 aa6.85□□□□□ -1.31
CPNE3-203ENST00000517490 PTPN11Q06124 597 aaPredicted RBP6.85□□□□□ -1.31
CPNE3-203ENST00000517490 KLF1Q13351 362 aaPredicted RBP6.85□□□□□ -1.31
CPNE3-203ENST00000517490 C16orf72Q14CZ0 275 aa6.85□□□□□ -1.31
CPNE3-203ENST00000517490 SEZ6Q53EL9 994 aa6.85□□□□□ -1.31
CPNE3-203ENST00000517490 IER5Q5VY09 327 aa6.85□□□□□ -1.31
CPNE3-203ENST00000517490 C16orf46Q6P387 395 aa6.85□□□□□ -1.31
CPNE3-203ENST00000517490 ZNF554Q86TJ5 538 aa6.85□□□□□ -1.31
CPNE3-203ENST00000517490 MYLK4Q86YV6 388 aaPredicted RBP6.85□□□□□ -1.31
CPNE3-203ENST00000517490 ZDHHC14Q8IZN3 488 aa6.85□□□□□ -1.31
CPNE3-203ENST00000517490 DAW1Q8N136 415 aa6.85□□□□□ -1.31
CPNE3-203ENST00000517490 CXorf38Q8TB03 319 aa6.85□□□□□ -1.31
CPNE3-203ENST00000517490 PDCD6IPQ8WUM4 868 aaKnown RBP6.85□□□□□ -1.31
CPNE3-203ENST00000517490 DCUN1D1Q96GG9 259 aa6.85□□□□□ -1.31
CPNE3-203ENST00000517490 CPNE1Q99829 537 aa6.85□□□□□ -1.31
CPNE3-203ENST00000517490 EBNA1BP2Q99848 306 aaKnown RBP6.85□□□□□ -1.31
CPNE3-203ENST00000517490 MRPL46Q9H2W6 279 aaKnown RBP6.85□□□□□ -1.31
CPNE3-203ENST00000517490 XPNPEP3Q9NQH7 507 aa6.85□□□□□ -1.31
CPNE3-203ENST00000517490 PXMP2Q9NR77 195 aa6.85□□□□□ -1.31
CPNE3-203ENST00000517490 DNAJC28Q9NX36 388 aa6.85□□□□□ -1.31
CPNE3-203ENST00000517490 RSL24D1Q9UHA3 163 aaKnown RBP6.85□□□□□ -1.31
CPNE3-203ENST00000517490 NUB1Q9Y5A7 615 aa6.85□□□□□ -1.31
CPNE3-203ENST00000517490 A0A087WXM4 84 aa6.85□□□□□ -1.31
CPNE3-203ENST00000517490 C16orf96A6NNT2 1141 aa6.85□□□□□ -1.31
CPNE3-203ENST00000517490 GNGT2O14610 69 aa6.85□□□□□ -1.31
CPNE3-203ENST00000517490 TPP1O14773 563 aa6.85□□□□□ -1.31
CPNE3-203ENST00000517490 KDM1AO60341 852 aa6.85□□□□□ -1.31
CPNE3-203ENST00000517490 TRUB2O95900 331 aaKnown RBP6.85□□□□□ -1.31
CPNE3-203ENST00000517490 SUPT20HL2P0C7V6 817 aa6.85□□□□□ -1.31
CPNE3-203ENST00000517490 T-ENOLP0DO92 83 aa6.85□□□□□ -1.31
CPNE3-203ENST00000517490 RBL1P28749 1068 aa6.85□□□□□ -1.31
CPNE3-203ENST00000517490 HADHAP40939 763 aa6.85□□□□□ -1.31
CPNE3-203ENST00000517490 GPX6P59796 221 aa6.85□□□□□ -1.31
CPNE3-203ENST00000517490 USP46P62068 366 aa6.85□□□□□ -1.31
CPNE3-203ENST00000517490 POU5F1BQ06416 359 aa6.85□□□□□ -1.31
CPNE3-203ENST00000517490 SUPT20HL1Q3ZLR7 823 aa6.85□□□□□ -1.31
CPNE3-203ENST00000517490 SLC35B2Q8TB61 432 aa6.85□□□□□ -1.31
CPNE3-203ENST00000517490 CYGBQ8WWM9 190 aa6.85□□□□□ -1.31
CPNE3-203ENST00000517490 USP13Q92995 863 aaPredicted RBP6.85□□□□□ -1.31
CPNE3-203ENST00000517490 MIPEPQ99797 713 aa6.85□□□□□ -1.31
CPNE3-203ENST00000517490 RPAP3Q9H6T3 665 aaPredicted RBP6.85□□□□□ -1.31
CPNE3-203ENST00000517490 CYP3A43Q9HB55 503 aa6.85□□□□□ -1.31
CPNE3-203ENST00000517490 ZNF70Q9UC06 446 aaPredicted RBP6.85□□□□□ -1.31
CPNE3-203ENST00000517490 SUN2Q9UH99 717 aa6.85□□□□□ -1.31
CPNE3-203ENST00000517490 ASB3Q9Y575 518 aa6.85□□□□□ -1.31
CPNE3-203ENST00000517490 WDR27A2RRH5 827 aa6.85□□□□□ -1.31
CPNE3-203ENST00000517490 RGSL1A5PLK6 1076 aa6.85□□□□□ -1.31
CPNE3-203ENST00000517490 TMEM114B3SHH9 223 aa6.85□□□□□ -1.31
CPNE3-203ENST00000517490 ANGPT2O15123 496 aa6.85□□□□□ -1.31
CPNE3-203ENST00000517490 ITGA2BP08514 1039 aa6.85□□□□□ -1.31
CPNE3-203ENST00000517490 PEX2P28328 305 aa6.85□□□□□ -1.31
CPNE3-203ENST00000517490 CAP2P40123 477 aa6.85□□□□□ -1.31
CPNE3-203ENST00000517490 NR2C2P49116 596 aa6.85□□□□□ -1.31
CPNE3-203ENST00000517490 AQP4P55087 323 aa6.85□□□□□ -1.31
CPNE3-203ENST00000517490 SLC18A2Q05940 514 aa6.85□□□□□ -1.31
CPNE3-203ENST00000517490 ATF7IP2Q5U623 682 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 109.8 ms