RNA–Protein interactions for RNA: ENST00000517417.2

PCDHGA1-202, Transcript of protocadherin gamma subfamily A, 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHGA1, Length 4,604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1-202ENST00000517417 RNF220Q5VTB9 566 aa11.16□□□□□ -0.62
PCDHGA1-202ENST00000517417 ELMSAN1Q6PJG2 1045 aa11.16□□□□□ -0.62
PCDHGA1-202ENST00000517417 SLC26A11Q86WA9 606 aa11.16□□□□□ -0.62
PCDHGA1-202ENST00000517417 TMEM161BQ8NDZ6 487 aa11.16□□□□□ -0.62
PCDHGA1-202ENST00000517417 SLCO2A1Q92959 643 aa11.16□□□□□ -0.62
PCDHGA1-202ENST00000517417 ASCC2Q9H1I8 757 aaPredicted RBP11.16□□□□□ -0.62
PCDHGA1-202ENST00000517417 UBP1Q9NZI7 540 aa11.16□□□□□ -0.62
PCDHGA1-202ENST00000517417 ITGB5P18084 799 aa11.16□□□□□ -0.62
PCDHGA1-202ENST00000517417 MAP3K7CLP57077 242 aa11.16□□□□□ -0.62
PCDHGA1-202ENST00000517417 RFWD3Q6PCD5 774 aa11.16□□□□□ -0.62
PCDHGA1-202ENST00000517417 NUP93Q8N1F7 819 aa11.16□□□□□ -0.62
PCDHGA1-202ENST00000517417 SHCBP1Q8NEM2 672 aa11.16□□□□□ -0.62
PCDHGA1-202ENST00000517417 TRIM15Q9C019 465 aa11.16□□□□□ -0.62
PCDHGA1-202ENST00000517417 CATSPERBQ9H7T0 1116 aa11.16□□□□□ -0.62
PCDHGA1-202ENST00000517417 GBA2Q9HCG7 927 aaPredicted RBP11.16□□□□□ -0.62
PCDHGA1-202ENST00000517417 CASTOR2A6NHX0 329 aa11.15□□□□□ -0.62
PCDHGA1-202ENST00000517417 ENDOD1O94919 500 aa11.15□□□□□ -0.62
PCDHGA1-202ENST00000517417 KLHL2O95198 593 aa11.15□□□□□ -0.62
PCDHGA1-202ENST00000517417 SLC26A2P50443 739 aa11.15□□□□□ -0.62
PCDHGA1-202ENST00000517417 NDST1P52848 882 aa11.15□□□□□ -0.62
PCDHGA1-202ENST00000517417 ADGRF2Q8IZF7 708 aa11.15□□□□□ -0.62
PCDHGA1-202ENST00000517417 DNAJB3Q8WWF6 145 aa11.15□□□□□ -0.62
PCDHGA1-202ENST00000517417 FAXDC2Q96IV6 333 aa11.15□□□□□ -0.62
PCDHGA1-202ENST00000517417 CCDC90BQ9GZT6 254 aa11.15□□□□□ -0.62
PCDHGA1-202ENST00000517417 ZCWPW1Q9H0M4 648 aa11.15□□□□□ -0.62
PCDHGA1-202ENST00000517417 LRP5O75197 1615 aa11.15□□□□□ -0.62
PCDHGA1-202ENST00000517417 GSC2O15499 205 aa11.15□□□□□ -0.62
PCDHGA1-202ENST00000517417 ADCY3O60266 1144 aa11.15□□□□□ -0.62
PCDHGA1-202ENST00000517417 PTPRAP18433 802 aa11.15□□□□□ -0.62
PCDHGA1-202ENST00000517417 SP100P23497 879 aaPredicted RBP11.15□□□□□ -0.62
PCDHGA1-202ENST00000517417 COPAP53621 1224 aa11.15□□□□□ -0.62
PCDHGA1-202ENST00000517417 NOMO3P69849 1222 aa11.15□□□□□ -0.62
PCDHGA1-202ENST00000517417 TBCCQ15814 346 aa11.15□□□□□ -0.62
PCDHGA1-202ENST00000517417 SPDYAQ5MJ70 313 aa11.15□□□□□ -0.62
PCDHGA1-202ENST00000517417 FBXO47Q5MNV8 452 aa11.15□□□□□ -0.62
PCDHGA1-202ENST00000517417 NAPEPLDQ6IQ20 393 aa11.15□□□□□ -0.62
PCDHGA1-202ENST00000517417 LAYNQ6UX15 382 aa11.15□□□□□ -0.62
PCDHGA1-202ENST00000517417 SCUBE3Q8IX30 993 aa11.15□□□□□ -0.62
PCDHGA1-202ENST00000517417 SAMD3Q8N6K7 520 aa11.15□□□□□ -0.62
PCDHGA1-202ENST00000517417 REPS2Q8NFH8 660 aa11.15□□□□□ -0.62
PCDHGA1-202ENST00000517417 CD101Q93033 1021 aa11.15□□□□□ -0.62
PCDHGA1-202ENST00000517417 DDX50Q9BQ39 737 aaKnown RBP11.15□□□□□ -0.62
PCDHGA1-202ENST00000517417 ZNF518BQ9C0D4 1074 aa11.15□□□□□ -0.62
PCDHGA1-202ENST00000517417 AAASQ9NRG9 546 aa11.15□□□□□ -0.62
PCDHGA1-202ENST00000517417 PIH1D1Q9NWS0 290 aaKnown RBP11.15□□□□□ -0.62
PCDHGA1-202ENST00000517417 KIAA1257Q9ULG3 409 aa11.15□□□□□ -0.62
PCDHGA1-202ENST00000517417 DRG1Q9Y295 367 aaKnown RBP11.15□□□□□ -0.62
PCDHGA1-202ENST00000517417 C2orf71A6NGG8 1288 aa11.15□□□□□ -0.62
PCDHGA1-202ENST00000517417 PDHXO00330 501 aa11.15□□□□□ -0.62
PCDHGA1-202ENST00000517417 STK25O00506 426 aa11.15□□□□□ -0.62
PCDHGA1-202ENST00000517417 JCHAINP01591 159 aa11.15□□□□□ -0.62
PCDHGA1-202ENST00000517417 KBTBD12Q3ZCT8 623 aa11.15□□□□□ -0.62
PCDHGA1-202ENST00000517417 DAW1Q8N136 415 aa11.15□□□□□ -0.62
PCDHGA1-202ENST00000517417 IL31RAQ8NI17 732 aa11.15□□□□□ -0.62
PCDHGA1-202ENST00000517417 C10orf82Q8WW14 230 aa11.15□□□□□ -0.62
PCDHGA1-202ENST00000517417 FRMD8P1Q9BZ68 369 aaPredicted RBP11.15□□□□□ -0.62
PCDHGA1-202ENST00000517417 TSPAN16Q9UKR8 245 aa11.15□□□□□ -0.62
PCDHGA1-202ENST00000517417 AP4E1Q9UPM8 1137 aa11.15□□□□□ -0.62
PCDHGA1-202ENST00000517417 SPDYE5A6NIY4 337 aa11.15□□□□□ -0.63
PCDHGA1-202ENST00000517417 ABLIM1O14639 778 aa11.15□□□□□ -0.63
PCDHGA1-202ENST00000517417 CYBBP04839 570 aa11.15□□□□□ -0.63
PCDHGA1-202ENST00000517417 THP07101 528 aa11.15□□□□□ -0.63
PCDHGA1-202ENST00000517417 SETSIPP0DME0 302 aa11.15□□□□□ -0.63
PCDHGA1-202ENST00000517417 AKT1P31749 480 aa11.15□□□□□ -0.63
PCDHGA1-202ENST00000517417 CSE1LP55060 971 aaKnown RBP11.15□□□□□ -0.63
PCDHGA1-202ENST00000517417 VSIG10LQ86VR7 867 aa11.15□□□□□ -0.63
PCDHGA1-202ENST00000517417 ZDHHC14Q8IZN3 488 aa11.15□□□□□ -0.63
PCDHGA1-202ENST00000517417 EDEM1Q92611 657 aa11.15□□□□□ -0.63
PCDHGA1-202ENST00000517417 TSPYL2Q9H2G4 693 aaPredicted RBP11.15□□□□□ -0.63
PCDHGA1-202ENST00000517417 AP3B1O00203 1094 aa11.14□□□□□ -0.63
PCDHGA1-202ENST00000517417 ANGPT2O15123 496 aa11.14□□□□□ -0.63
PCDHGA1-202ENST00000517417 CHRM3P20309 590 aa11.14□□□□□ -0.63
PCDHGA1-202ENST00000517417 RGS2P41220 211 aa11.14□□□□□ -0.63
PCDHGA1-202ENST00000517417 ARHGDIAP52565 204 aa11.14□□□□□ -0.63
PCDHGA1-202ENST00000517417 BCAT1P54687 386 aa11.14□□□□□ -0.63
PCDHGA1-202ENST00000517417 NCKAP1LP55160 1127 aa11.14□□□□□ -0.63
PCDHGA1-202ENST00000517417 CNGA3Q16281 694 aa11.14□□□□□ -0.63
PCDHGA1-202ENST00000517417 UGCGQ16739 394 aa11.14□□□□□ -0.63
PCDHGA1-202ENST00000517417 RNF180Q86T96 592 aa11.14□□□□□ -0.63
PCDHGA1-202ENST00000517417 BLOC1S5Q8TDH9 187 aa11.14□□□□□ -0.63
PCDHGA1-202ENST00000517417 CADM1Q9BY67 442 aaKnown RBP11.14□□□□□ -0.63
PCDHGA1-202ENST00000517417 ACSS3Q9H6R3 686 aa11.14□□□□□ -0.63
PCDHGA1-202ENST00000517417 EML4Q9HC35 981 aaKnown RBP11.14□□□□□ -0.63
PCDHGA1-202ENST00000517417 LSM7Q9UK45 103 aaKnown RBP11.14□□□□□ -0.63
PCDHGA1-202ENST00000517417 NENFQ9UMX5 172 aa11.14□□□□□ -0.63
PCDHGA1-202ENST00000517417 POMCP01189 267 aa11.14□□□□□ -0.63
PCDHGA1-202ENST00000517417 HMOX2P30519 316 aa11.14□□□□□ -0.63
PCDHGA1-202ENST00000517417 ALYREFQ86V81 257 aaKnown RBP11.14□□□□□ -0.63
PCDHGA1-202ENST00000517417 GPC2Q8N158 579 aa11.14□□□□□ -0.63
PCDHGA1-202ENST00000517417 COPS5Q92905 334 aa11.14□□□□□ -0.63
PCDHGA1-202ENST00000517417 ZMYND8Q9ULU4 1186 aaPredicted RBP11.14□□□□□ -0.63
PCDHGA1-202ENST00000517417 GOLGA4Q13439 2230 aaKnown RBP11.14□□□□□ -0.63
PCDHGA1-202ENST00000517417 hCG_1818297A0A087WSY0 165 aa11.14□□□□□ -0.63
PCDHGA1-202ENST00000517417 ODC1P11926 461 aa11.14□□□□□ -0.63
PCDHGA1-202ENST00000517417 GLRBP48167 497 aa11.14□□□□□ -0.63
PCDHGA1-202ENST00000517417 ALDH7A1P49419 539 aaKnown RBP11.14□□□□□ -0.63
PCDHGA1-202ENST00000517417 HARS2P49590 506 aaKnown RBP11.14□□□□□ -0.63
PCDHGA1-202ENST00000517417 FKBP1AP62942 108 aaKnown RBP11.14□□□□□ -0.63
PCDHGA1-202ENST00000517417 RARS2Q5T160 578 aaKnown RBP11.14□□□□□ -0.63
PCDHGA1-202ENST00000517417 ANO7Q6IWH7 933 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms