RNA–Protein interactions for RNA: ENST00000514755.5

UBE2D3-232, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-232ENST00000514755 RHBDF2Q6PJF5 856 aa11.55□□□□□ -0.56
UBE2D3-232ENST00000514755 TSSK4Q6SA08 328 aa11.55□□□□□ -0.56
UBE2D3-232ENST00000514755 SLC47A2Q86VL8 602 aa11.55□□□□□ -0.56
UBE2D3-232ENST00000514755 C12orf40Q86WS4 652 aa11.55□□□□□ -0.56
UBE2D3-232ENST00000514755 MIB1Q86YT6 1006 aa11.55□□□□□ -0.56
UBE2D3-232ENST00000514755 C1orf210Q8IVY1 113 aa11.55□□□□□ -0.56
UBE2D3-232ENST00000514755 CPA6Q8N4T0 437 aa11.55□□□□□ -0.56
UBE2D3-232ENST00000514755 WDTC1Q8N5D0 677 aa11.55□□□□□ -0.56
UBE2D3-232ENST00000514755 EDEM1Q92611 657 aa11.55□□□□□ -0.56
UBE2D3-232ENST00000514755 ATP2A3Q93084 1043 aa11.55□□□□□ -0.56
UBE2D3-232ENST00000514755 P2RY11Q96G91 374 aa11.55□□□□□ -0.56
UBE2D3-232ENST00000514755 MSANTD3Q96H12 275 aa11.55□□□□□ -0.56
UBE2D3-232ENST00000514755 GANQ9H2C0 597 aa11.55□□□□□ -0.56
UBE2D3-232ENST00000514755 SPATA6Q9NWH7 488 aaPredicted RBP11.55□□□□□ -0.56
UBE2D3-232ENST00000514755 CLIC5Q9NZA1 410 aa11.55□□□□□ -0.56
UBE2D3-232ENST00000514755 LIMA1Q9UHB6 759 aaKnown RBP11.55□□□□□ -0.56
UBE2D3-232ENST00000514755 RASAL2Q9UJF2 1139 aa11.55□□□□□ -0.56
UBE2D3-232ENST00000514755 SH3BP1Q9Y3L3 701 aa11.55□□□□□ -0.56
UBE2D3-232ENST00000514755 DMDP11532 3685 aa11.55□□□□□ -0.56
UBE2D3-232ENST00000514755 ATG2BQ96BY7 2078 aa11.55□□□□□ -0.56
UBE2D3-232ENST00000514755 MYO15AQ9UKN7 3530 aa11.54□□□□□ -0.56
UBE2D3-232ENST00000514755 E2F8A0AVK6 867 aa11.54□□□□□ -0.56
UBE2D3-232ENST00000514755 FAM170AA1A519 330 aa11.54□□□□□ -0.56
UBE2D3-232ENST00000514755 TRDMT1O14717 391 aaKnown RBP11.54□□□□□ -0.56
UBE2D3-232ENST00000514755 EGFP01133 1207 aa11.54□□□□□ -0.56
UBE2D3-232ENST00000514755 KLKB1P03952 638 aa11.54□□□□□ -0.56
UBE2D3-232ENST00000514755 HMBSP08397 361 aa11.54□□□□□ -0.56
UBE2D3-232ENST00000514755 RALAP11233 206 aa11.54□□□□□ -0.56
UBE2D3-232ENST00000514755 UCHL3P15374 230 aa11.54□□□□□ -0.56
UBE2D3-232ENST00000514755 PLA2G5P39877 138 aa11.54□□□□□ -0.56
UBE2D3-232ENST00000514755 OPRD1P41143 372 aa11.54□□□□□ -0.56
UBE2D3-232ENST00000514755 RPS9P46781 194 aaKnown RBP11.54□□□□□ -0.56
UBE2D3-232ENST00000514755 SLC6A11P48066 632 aa11.54□□□□□ -0.56
UBE2D3-232ENST00000514755 RPL34P49207 117 aaKnown RBP11.54□□□□□ -0.56
UBE2D3-232ENST00000514755 RAPGEF1Q13905 1077 aa11.54□□□□□ -0.56
UBE2D3-232ENST00000514755 TMEM196Q5HYL7 178 aa11.54□□□□□ -0.56
UBE2D3-232ENST00000514755 LY6G5CQ5SRR4 150 aa11.54□□□□□ -0.56
UBE2D3-232ENST00000514755 BSPRYQ5W0U4 402 aa11.54□□□□□ -0.56
UBE2D3-232ENST00000514755 DDX42Q86XP3 938 aaKnown RBP eCLIP11.54□□□□□ -0.564e-7■■■□□ 18.4
UBE2D3-232ENST00000514755 PASD1Q8IV76 773 aa11.54□□□□□ -0.56
UBE2D3-232ENST00000514755 SFTPA1Q8IWL2 248 aa11.54□□□□□ -0.56
UBE2D3-232ENST00000514755 SIX6OS1Q8N1H7 587 aa11.54□□□□□ -0.56
UBE2D3-232ENST00000514755 ZNF276Q8N554 614 aa11.54□□□□□ -0.56
UBE2D3-232ENST00000514755 ATOH1Q92858 354 aaPredicted RBP11.54□□□□□ -0.56
UBE2D3-232ENST00000514755 HSFY1Q96LI6 401 aa11.54□□□□□ -0.56
UBE2D3-232ENST00000514755 FAM81BQ96LP2 452 aa11.54□□□□□ -0.56
UBE2D3-232ENST00000514755 PRRX2Q99811 253 aa11.54□□□□□ -0.56
UBE2D3-232ENST00000514755 P2RY13Q9BPV8 354 aa11.54□□□□□ -0.56
UBE2D3-232ENST00000514755 MIS12Q9H081 205 aa11.54□□□□□ -0.56
UBE2D3-232ENST00000514755 CHRDQ9H2X0 955 aa11.54□□□□□ -0.56
UBE2D3-232ENST00000514755 PLCB1Q9NQ66 1216 aa11.54□□□□□ -0.56
UBE2D3-232ENST00000514755 CNGB3Q9NQW8 809 aa11.54□□□□□ -0.56
UBE2D3-232ENST00000514755 POLR3BQ9NW08 1133 aaPredicted RBP11.54□□□□□ -0.56
UBE2D3-232ENST00000514755 SFMBT1Q9UHJ3 866 aa11.54□□□□□ -0.56
UBE2D3-232ENST00000514755 DNMT3LQ9UJW3 386 aa11.54□□□□□ -0.56
UBE2D3-232ENST00000514755 SIK3Q9Y2K2 1263 aa11.54□□□□□ -0.56
UBE2D3-232ENST00000514755 LRRC10BA6NIK2 292 aa11.53□□□□□ -0.56
UBE2D3-232ENST00000514755 NCAM2O15394 837 aa11.53□□□□□ -0.56
UBE2D3-232ENST00000514755 STC2O76061 302 aa11.53□□□□□ -0.56
UBE2D3-232ENST00000514755 NFATC1O95644 943 aa11.53□□□□□ -0.56
UBE2D3-232ENST00000514755 FYNP06241 537 aa11.53□□□□□ -0.56
UBE2D3-232ENST00000514755 IQCB1Q15051 598 aa11.53□□□□□ -0.56
UBE2D3-232ENST00000514755 BTBD8Q5XKL5 378 aa11.53□□□□□ -0.56
UBE2D3-232ENST00000514755 Q6ZNB5 142 aa11.53□□□□□ -0.56
UBE2D3-232ENST00000514755 HTR3DQ70Z44 454 aa11.53□□□□□ -0.56
UBE2D3-232ENST00000514755 CYP2U1Q7Z449 544 aa11.53□□□□□ -0.56
UBE2D3-232ENST00000514755 TMEM25Q86YD3 366 aa11.53□□□□□ -0.56
UBE2D3-232ENST00000514755 FAM71AQ8IYT1 594 aa11.53□□□□□ -0.56
UBE2D3-232ENST00000514755 SCML4Q8N228 414 aa11.53□□□□□ -0.56
UBE2D3-232ENST00000514755 C1orf131Q8NDD1 294 aaKnown RBP11.53□□□□□ -0.56
UBE2D3-232ENST00000514755 CD101Q93033 1021 aa11.53□□□□□ -0.56
UBE2D3-232ENST00000514755 PIWIL1Q96J94 861 aaKnown RBP11.53□□□□□ -0.56
UBE2D3-232ENST00000514755 BPIFA3Q9BQP9 254 aa11.53□□□□□ -0.56
UBE2D3-232ENST00000514755 ST7Q9NRC1 585 aa11.53□□□□□ -0.56
UBE2D3-232ENST00000514755 FAM207AQ9NSI2 230 aaPredicted RBP11.53□□□□□ -0.56
UBE2D3-232ENST00000514755 PCDHGA11Q9Y5H2 935 aa11.53□□□□□ -0.56
UBE2D3-232ENST00000514755 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.52□□□□□ -0.57
UBE2D3-232ENST00000514755 SLC12A8A0AV02 714 aa11.52□□□□□ -0.57
UBE2D3-232ENST00000514755 LGALS16A8MUM7 142 aa11.52□□□□□ -0.57
UBE2D3-232ENST00000514755 E5RJQ4 531 aa11.52□□□□□ -0.57
UBE2D3-232ENST00000514755 F8VZ95 297 aa11.52□□□□□ -0.57
UBE2D3-232ENST00000514755 SLC9A3R1O14745 358 aaPredicted RBP11.52□□□□□ -0.57
UBE2D3-232ENST00000514755 TRIM24O15164 1050 aa11.52□□□□□ -0.57
UBE2D3-232ENST00000514755 TEX33O43247 280 aa11.52□□□□□ -0.57
UBE2D3-232ENST00000514755 PAPSS1O43252 624 aaPredicted RBP11.52□□□□□ -0.57
UBE2D3-232ENST00000514755 MSI1O43347 362 aaKnown RBP11.52□□□□□ -0.57
UBE2D3-232ENST00000514755 MED7O43513 233 aa11.52□□□□□ -0.57
UBE2D3-232ENST00000514755 SP9P0CG40 484 aa11.52□□□□□ -0.57
UBE2D3-232ENST00000514755 CDK11BP21127 795 aaKnown RBP11.52□□□□□ -0.57
UBE2D3-232ENST00000514755 POLR2FP61218 127 aaKnown RBP11.52□□□□□ -0.57
UBE2D3-232ENST00000514755 SATB1Q01826 763 aa11.52□□□□□ -0.57
UBE2D3-232ENST00000514755 PDCLQ13371 301 aa11.52□□□□□ -0.57
UBE2D3-232ENST00000514755 SYCP1Q15431 976 aa11.52□□□□□ -0.57
UBE2D3-232ENST00000514755 C1orf228Q6PIY5 440 aa11.52□□□□□ -0.57
UBE2D3-232ENST00000514755 TPGS1Q6ZTW0 290 aa11.52□□□□□ -0.57
UBE2D3-232ENST00000514755 RSRC2Q7L4I2 434 aaKnown RBP11.52□□□□□ -0.57
UBE2D3-232ENST00000514755 FMNL3Q8IVF7 1028 aa11.52□□□□□ -0.57
UBE2D3-232ENST00000514755 ARHGAP18Q8N392 663 aa11.52□□□□□ -0.57
UBE2D3-232ENST00000514755 KIAA1958Q8N8K9 716 aa11.52□□□□□ -0.57
UBE2D3-232ENST00000514755 NAT16Q8N8M0 369 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms