RNA–Protein interactions for RNA: ENST00000514572.1

RFC1-216, Transcript of replication factor C subunit 1, humanhuman

TSL 2

Gene RFC1, Length 584 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-216ENST00000514572 Q8TCH9 128 aa5.74□□□□□ -1.49
RFC1-216ENST00000514572 GLG1Q92896 1179 aa5.74□□□□□ -1.49
RFC1-216ENST00000514572 REXO5Q96IC2 774 aaKnown RBP5.74□□□□□ -1.49
RFC1-216ENST00000514572 ZNF768Q9H5H4 540 aaKnown RBP5.74□□□□□ -1.49
RFC1-216ENST00000514572 NKX1-2Q9UD57 310 aaPredicted RBP5.74□□□□□ -1.49
RFC1-216ENST00000514572 GABRQQ9UN88 632 aa5.74□□□□□ -1.49
RFC1-216ENST00000514572 GPR34Q9UPC5 381 aa5.74□□□□□ -1.49
RFC1-216ENST00000514572 A1L4Q6 167 aa5.73□□□□□ -1.49
RFC1-216ENST00000514572 HNRNPRO43390 633 aaKnown RBP5.73□□□□□ -1.49
RFC1-216ENST00000514572 PROM1O43490 865 aa5.73□□□□□ -1.49
RFC1-216ENST00000514572 LPXNO60711 386 aa5.73□□□□□ -1.49
RFC1-216ENST00000514572 ACP5P13686 325 aa5.73□□□□□ -1.49
RFC1-216ENST00000514572 CHN1P15882 459 aa5.73□□□□□ -1.49
RFC1-216ENST00000514572 CHMP24386 653 aa5.73□□□□□ -1.49
RFC1-216ENST00000514572 PNPLA4P41247 253 aa5.73□□□□□ -1.49
RFC1-216ENST00000514572 RRP1BQ14684 758 aaKnown RBP5.73□□□□□ -1.49
RFC1-216ENST00000514572 GPR68Q15743 365 aa5.73□□□□□ -1.49
RFC1-216ENST00000514572 CYP1B1Q16678 543 aa5.73□□□□□ -1.49
RFC1-216ENST00000514572 LRRC24Q50LG9 513 aa5.73□□□□□ -1.49
RFC1-216ENST00000514572 UBXN11Q5T124 520 aa5.73□□□□□ -1.49
RFC1-216ENST00000514572 LIPMQ5VYY2 423 aa5.73□□□□□ -1.49
RFC1-216ENST00000514572 HAUS3Q68CZ6 603 aa5.73□□□□□ -1.49
RFC1-216ENST00000514572 ARMC6Q6NXE6 501 aa5.73□□□□□ -1.49
RFC1-216ENST00000514572 INO80CQ6PI98 192 aaPredicted RBP5.73□□□□□ -1.49
RFC1-216ENST00000514572 ZSCAN2Q7Z7L9 614 aaPredicted RBP5.73□□□□□ -1.49
RFC1-216ENST00000514572 CAND1Q86VP6 1230 aaKnown RBP5.73□□□□□ -1.49
RFC1-216ENST00000514572 FSIP1Q8NA03 581 aa5.73□□□□□ -1.49
RFC1-216ENST00000514572 EDAQ92838 391 aa5.73□□□□□ -1.49
RFC1-216ENST00000514572 TRMT61AQ96FX7 289 aaKnown RBP5.73□□□□□ -1.49
RFC1-216ENST00000514572 WWC2-AS2Q96NR7 200 aa5.73□□□□□ -1.49
RFC1-216ENST00000514572 PIGSQ96S52 555 aa5.73□□□□□ -1.49
RFC1-216ENST00000514572 ALOXE3Q9BYJ1 711 aa5.73□□□□□ -1.49
RFC1-216ENST00000514572 TPSD1Q9BZJ3 242 aa5.73□□□□□ -1.49
RFC1-216ENST00000514572 FBXO28Q9NVF7 368 aa5.73□□□□□ -1.49
RFC1-216ENST00000514572 ZDHHC7Q9NXF8 308 aa5.73□□□□□ -1.49
RFC1-216ENST00000514572 GDAQ9Y2T3 454 aa5.73□□□□□ -1.49
RFC1-216ENST00000514572 PRDM2Q13029 1718 aa5.73□□□□□ -1.49
RFC1-216ENST00000514572 ARHGEF11O15085 1522 aa5.73□□□□□ -1.49
RFC1-216ENST00000514572 URB2Q14146 1524 aaKnown RBP5.73□□□□□ -1.49
RFC1-216ENST00000514572 CCDC187A0A096LP49 1063 aa5.72□□□□□ -1.49
RFC1-216ENST00000514572 FAM90A7PA6NKC0 464 aa5.72□□□□□ -1.49
RFC1-216ENST00000514572 FAM90A22PA8MWA6 464 aa5.72□□□□□ -1.49
RFC1-216ENST00000514572 FAM90A12PA8MX19 464 aa5.72□□□□□ -1.49
RFC1-216ENST00000514572 FAM90A23PA8MXZ1 464 aa5.72□□□□□ -1.49
RFC1-216ENST00000514572 H3BNC9 293 aa5.72□□□□□ -1.49
RFC1-216ENST00000514572 RNASET2O00584 256 aaKnown RBP5.72□□□□□ -1.49
RFC1-216ENST00000514572 MUSKO15146 869 aa5.72□□□□□ -1.49
RFC1-216ENST00000514572 DHX16O60231 1041 aaKnown RBP5.72□□□□□ -1.49
RFC1-216ENST00000514572 DOK2O60496 412 aa5.72□□□□□ -1.49
RFC1-216ENST00000514572 NCR1O76036 304 aa5.72□□□□□ -1.49
RFC1-216ENST00000514572 SCAF4O95104 1147 aaKnown RBP5.72□□□□□ -1.49
RFC1-216ENST00000514572 SGPL1O95470 568 aa5.72□□□□□ -1.49
RFC1-216ENST00000514572 MLYCDO95822 493 aa5.72□□□□□ -1.49
RFC1-216ENST00000514572 ALADP13716 330 aa5.72□□□□□ -1.49
RFC1-216ENST00000514572 CPA1P15085 419 aa5.72□□□□□ -1.49
RFC1-216ENST00000514572 ACO1P21399 889 aaKnown RBP5.72□□□□□ -1.49
RFC1-216ENST00000514572 RAD52P43351 418 aa5.72□□□□□ -1.49
RFC1-216ENST00000514572 POLD2P49005 469 aa5.72□□□□□ -1.49
RFC1-216ENST00000514572 CLNS1AP54105 237 aaKnown RBP5.72□□□□□ -1.49
RFC1-216ENST00000514572 NUCB1Q02818 461 aa5.72□□□□□ -1.49
RFC1-216ENST00000514572 TLE3Q04726 772 aa5.72□□□□□ -1.49
RFC1-216ENST00000514572 SEMA3BQ13214 749 aa5.72□□□□□ -1.49
RFC1-216ENST00000514572 DNASE1L3Q13609 305 aa5.72□□□□□ -1.49
RFC1-216ENST00000514572 THOC5Q13769 683 aaKnown RBP5.72□□□□□ -1.49
RFC1-216ENST00000514572 ZNF124Q15973 351 aa5.72□□□□□ -1.49
RFC1-216ENST00000514572 FAM187BQ17R55 369 aa5.72□□□□□ -1.49
RFC1-216ENST00000514572 P3H1Q32P28 736 aa5.72□□□□□ -1.49
RFC1-216ENST00000514572 RABL3Q5HYI8 236 aa5.72□□□□□ -1.49
RFC1-216ENST00000514572 SNX30Q5VWJ9 437 aa5.72□□□□□ -1.49
RFC1-216ENST00000514572 PDXDC1Q6P996 788 aa5.72□□□□□ -1.49
RFC1-216ENST00000514572 R3HCC1LQ7Z5L2 792 aaKnown RBP5.72□□□□□ -1.49
RFC1-216ENST00000514572 GALNT5Q7Z7M9 940 aa5.72□□□□□ -1.49
RFC1-216ENST00000514572 CHD1LQ86WJ1 897 aa5.72□□□□□ -1.49
RFC1-216ENST00000514572 C1QL4Q86Z23 238 aa5.72□□□□□ -1.49
RFC1-216ENST00000514572 OR8H2Q8N162 312 aa5.72□□□□□ -1.49
RFC1-216ENST00000514572 LPIN2Q92539 896 aa5.72□□□□□ -1.49
RFC1-216ENST00000514572 RNF31Q96EP0 1072 aa5.72□□□□□ -1.49
RFC1-216ENST00000514572 FAM89AQ96GI7 184 aa5.72□□□□□ -1.49
RFC1-216ENST00000514572 FAR2Q96K12 515 aa5.72□□□□□ -1.49
RFC1-216ENST00000514572 STN1Q9H668 368 aaKnown RBP5.72□□□□□ -1.49
RFC1-216ENST00000514572 PRKRIP1Q9H875 184 aaPredicted RBP5.72□□□□□ -1.49
RFC1-216ENST00000514572 GLOD4Q9HC38 313 aa5.72□□□□□ -1.49
RFC1-216ENST00000514572 AKIP1Q9NQ31 210 aa5.72□□□□□ -1.49
RFC1-216ENST00000514572 SLC25A10Q9UBX3 287 aaPredicted RBP5.72□□□□□ -1.49
RFC1-216ENST00000514572 BAG5Q9UL15 447 aa5.72□□□□□ -1.49
RFC1-216ENST00000514572 TRPC5Q9UL62 973 aaPredicted RBP5.72□□□□□ -1.49
RFC1-216ENST00000514572 SH2B3Q9UQQ2 575 aa5.72□□□□□ -1.49
RFC1-216ENST00000514572 MAP3K2Q9Y2U5 619 aa5.72□□□□□ -1.49
RFC1-216ENST00000514572 IFT140Q96RY7 1462 aa5.71□□□□□ -1.49
RFC1-216ENST00000514572 TRGV11A0A075B6L2 103 aa5.71□□□□□ -1.5
RFC1-216ENST00000514572 WDR27A2RRH5 827 aa5.71□□□□□ -1.5
RFC1-216ENST00000514572 AGAP5A6NIR3 686 aa5.71□□□□□ -1.5
RFC1-216ENST00000514572 SLC16A3O15427 465 aaKnown RBP5.71□□□□□ -1.5
RFC1-216ENST00000514572 TMCC2O75069 709 aa5.71□□□□□ -1.5
RFC1-216ENST00000514572 PTP4A3O75365 173 aa5.71□□□□□ -1.5
RFC1-216ENST00000514572 CDKL5O76039 1030 aa5.71□□□□□ -1.5
RFC1-216ENST00000514572 SCGB1D1O95968 90 aa5.71□□□□□ -1.5
RFC1-216ENST00000514572 IL6RP08887 468 aaPredicted RBP5.71□□□□□ -1.5
RFC1-216ENST00000514572 IGFBP2P18065 325 aa5.71□□□□□ -1.5
RFC1-216ENST00000514572 YY1P25490 414 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms