RNA–Protein interactions for RNA: ENST00000512590.6

VCAN-208, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 5,923 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-208ENST00000512590 LRRC8DQ7L1W4 858 aa9.16□□□□□ -0.94
VCAN-208ENST00000512590 FAM129CQ86XR2 697 aa9.16□□□□□ -0.94
VCAN-208ENST00000512590 SMYD1Q8NB12 490 aa9.16□□□□□ -0.94
VCAN-208ENST00000512590 RMND5BQ96G75 393 aaPredicted RBP9.16□□□□□ -0.94
VCAN-208ENST00000512590 CNOT10Q9H9A5 744 aaKnown RBP9.16□□□□□ -0.94
VCAN-208ENST00000512590 EPN1Q9Y6I3 576 aaPredicted RBP9.16□□□□□ -0.94
VCAN-208ENST00000512590 MLH3Q9UHC1 1453 aa9.16□□□□□ -0.94
VCAN-208ENST00000512590 XPO1O14980 1071 aaKnown RBP9.16□□□□□ -0.94
VCAN-208ENST00000512590 KHDRBS3O75525 346 aaKnown RBP9.16□□□□□ -0.94
VCAN-208ENST00000512590 PGM3O95394 542 aa9.16□□□□□ -0.94
VCAN-208ENST00000512590 CSTF2P33240 577 aaKnown RBP eCLIP9.16□□□□□ -0.94
VCAN-208ENST00000512590 RGS8P57771 180 aaPredicted RBP9.16□□□□□ -0.94
VCAN-208ENST00000512590 PRKCEQ02156 737 aa9.16□□□□□ -0.94
VCAN-208ENST00000512590 CDR2LQ86X02 465 aaPredicted RBP9.16□□□□□ -0.94
VCAN-208ENST00000512590 GLIS2Q9BZE0 524 aaPredicted RBP9.16□□□□□ -0.94
VCAN-208ENST00000512590 FOXP1Q9H334 677 aaPredicted RBP9.16□□□□□ -0.94
VCAN-208ENST00000512590 PXMP2Q9NR77 195 aa9.16□□□□□ -0.94
VCAN-208ENST00000512590 SPATA6Q9NWH7 488 aaPredicted RBP9.16□□□□□ -0.94
VCAN-208ENST00000512590 HPS5Q9UPZ3 1129 aa9.16□□□□□ -0.94
VCAN-208ENST00000512590 RASA4BC9J798 803 aa9.16□□□□□ -0.94
VCAN-208ENST00000512590 RASA4O43374 803 aa9.16□□□□□ -0.94
VCAN-208ENST00000512590 MATN4O95460 622 aa9.16□□□□□ -0.94
VCAN-208ENST00000512590 NUDT17P0C025 328 aa9.16□□□□□ -0.94
VCAN-208ENST00000512590 EPHA7Q15375 998 aa9.16□□□□□ -0.94
VCAN-208ENST00000512590 PAGE2BQ5JRK9 111 aa9.16□□□□□ -0.94
VCAN-208ENST00000512590 RARS2Q5T160 578 aaKnown RBP9.16□□□□□ -0.94
VCAN-208ENST00000512590 RGMBQ6NW40 437 aa9.16□□□□□ -0.94
VCAN-208ENST00000512590 CCDC81Q6ZN84 652 aa9.16□□□□□ -0.94
VCAN-208ENST00000512590 PIGBQ92521 554 aa9.16□□□□□ -0.94
VCAN-208ENST00000512590 ELMO1Q92556 727 aa9.16□□□□□ -0.94
VCAN-208ENST00000512590 RIT1Q92963 219 aa9.16□□□□□ -0.94
VCAN-208ENST00000512590 PMEPA1Q969W9 287 aa9.16□□□□□ -0.94
VCAN-208ENST00000512590 TMEM125Q96AQ2 219 aa9.16□□□□□ -0.94
VCAN-208ENST00000512590 C18orf25Q96B23 403 aaPredicted RBP9.16□□□□□ -0.94
VCAN-208ENST00000512590 BCO2Q9BYV7 579 aa9.16□□□□□ -0.94
VCAN-208ENST00000512590 FAM192AQ9GZU8 254 aa9.16□□□□□ -0.94
VCAN-208ENST00000512590 OSBPL2Q9H1P3 480 aa9.16□□□□□ -0.94
VCAN-208ENST00000512590 ADGRG1Q9Y653 693 aa9.16□□□□□ -0.94
VCAN-208ENST00000512590 KRT6AP02538 564 aa9.16□□□□□ -0.94
VCAN-208ENST00000512590 KRT6BP04259 564 aa9.16□□□□□ -0.94
VCAN-208ENST00000512590 KRT6CP48668 564 aa9.16□□□□□ -0.94
VCAN-208ENST00000512590 SNCBQ16143 134 aa9.16□□□□□ -0.94
VCAN-208ENST00000512590 ARMCX6Q7L4S7 300 aa9.16□□□□□ -0.94
VCAN-208ENST00000512590 GIPC3Q8TF64 312 aa9.16□□□□□ -0.94
VCAN-208ENST00000512590 GPER1Q99527 375 aa9.16□□□□□ -0.94
VCAN-208ENST00000512590 DESI2Q9BSY9 194 aa9.16□□□□□ -0.94
VCAN-208ENST00000512590 FAIM2Q9BWQ8 316 aa9.16□□□□□ -0.94
VCAN-208ENST00000512590 TAPBPLQ9BX59 468 aa9.16□□□□□ -0.94
VCAN-208ENST00000512590 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.16□□□□□ -0.94
VCAN-208ENST00000512590 PPP2R3BQ9Y5P8 575 aa9.16□□□□□ -0.94
VCAN-208ENST00000512590 TTC34A8MYJ7 566 aa9.16□□□□□ -0.94
VCAN-208ENST00000512590 ITGA3P26006 1051 aa9.16□□□□□ -0.94
VCAN-208ENST00000512590 EIF2S3P41091 472 aaKnown RBP9.16□□□□□ -0.94
VCAN-208ENST00000512590 CCNG1P51959 295 aa9.16□□□□□ -0.94
VCAN-208ENST00000512590 NCOA4Q13772 614 aa9.16□□□□□ -0.94
VCAN-208ENST00000512590 MFSD10Q14728 455 aa9.16□□□□□ -0.94
VCAN-208ENST00000512590 RAB39AQ14964 217 aa9.16□□□□□ -0.94
VCAN-208ENST00000512590 AKIRIN2Q53H80 203 aa9.16□□□□□ -0.94
VCAN-208ENST00000512590 OVOS1Q6IE37 1185 aa9.16□□□□□ -0.94
VCAN-208ENST00000512590 KRT74Q7RTS7 529 aa9.16□□□□□ -0.94
VCAN-208ENST00000512590 PHYKPLQ8IUZ5 450 aa9.16□□□□□ -0.94
VCAN-208ENST00000512590 FBXO16Q8IX29 292 aaPredicted RBP9.16□□□□□ -0.94
VCAN-208ENST00000512590 CACTIN-AS1Q8N1I8 211 aa9.16□□□□□ -0.94
VCAN-208ENST00000512590 ANKFN1Q8N957 763 aa9.16□□□□□ -0.94
VCAN-208ENST00000512590 DCBLD2Q96PD2 775 aa9.16□□□□□ -0.94
VCAN-208ENST00000512590 EIF2AK1Q9BQI3 630 aaKnown RBP9.16□□□□□ -0.94
VCAN-208ENST00000512590 TRIM2Q9C040 744 aa9.16□□□□□ -0.94
VCAN-208ENST00000512590 BHLHE41Q9C0J9 482 aaPredicted RBP9.16□□□□□ -0.94
VCAN-208ENST00000512590 HDHD2Q9H0R4 259 aa9.16□□□□□ -0.94
VCAN-208ENST00000512590 ACTR8Q9H981 624 aa9.16□□□□□ -0.94
VCAN-208ENST00000512590 KDM6AO15550 1401 aaPredicted RBP9.16□□□□□ -0.94
VCAN-208ENST00000512590 A8MX80 341 aa9.15□□□□□ -0.94
VCAN-208ENST00000512590 PODXLO00592 558 aa9.15□□□□□ -0.94
VCAN-208ENST00000512590 GUCY1A3Q02108 690 aa9.15□□□□□ -0.94
VCAN-208ENST00000512590 ADCY2Q08462 1091 aa9.15□□□□□ -0.94
VCAN-208ENST00000512590 NDUFAF6Q330K2 333 aa9.15□□□□□ -0.94
VCAN-208ENST00000512590 AMZ1Q400G9 498 aa9.15□□□□□ -0.94
VCAN-208ENST00000512590 FUT11Q495W5 492 aa9.15□□□□□ -0.94
VCAN-208ENST00000512590 C2orf27AQ580R0 203 aa9.15□□□□□ -0.94
VCAN-208ENST00000512590 POMZP3Q6PJE2 187 aa9.15□□□□□ -0.94
VCAN-208ENST00000512590 ADGRF4Q8IZF3 695 aa9.15□□□□□ -0.94
VCAN-208ENST00000512590 ARL15Q9NXU5 204 aa9.15□□□□□ -0.94
VCAN-208ENST00000512590 ZFP69BQ9UJL9 534 aa9.15□□□□□ -0.94
VCAN-208ENST00000512590 ABCA10Q8WWZ4 1543 aa9.15□□□□□ -0.94
VCAN-208ENST00000512590 LAMTOR5O43504 91 aa9.15□□□□□ -0.94
VCAN-208ENST00000512590 CHP2O43745 196 aa9.15□□□□□ -0.94
VCAN-208ENST00000512590 CD2BP2O95400 341 aaKnown RBP9.15□□□□□ -0.94
VCAN-208ENST00000512590 ALBP02768 609 aa9.15□□□□□ -0.94
VCAN-208ENST00000512590 MSX1P28360 303 aa9.15□□□□□ -0.94
VCAN-208ENST00000512590 KCTD16Q68DU8 428 aa9.15□□□□□ -0.94
VCAN-208ENST00000512590 ARMC5Q96C12 935 aa9.15□□□□□ -0.94
VCAN-208ENST00000512590 EPS8L2Q9H6S3 715 aa9.15□□□□□ -0.94
VCAN-208ENST00000512590 LRRC40Q9H9A6 602 aa9.15□□□□□ -0.94
VCAN-208ENST00000512590 RASSF1Q9NS23 344 aa9.15□□□□□ -0.94
VCAN-208ENST00000512590 KDM5DQ9BY66 1539 aa9.15□□□□□ -0.94
VCAN-208ENST00000512590 ATP10AO60312 1499 aa9.15□□□□□ -0.94
VCAN-208ENST00000512590 PSMD4P55036 377 aaKnown RBP9.15□□□□□ -0.94
VCAN-208ENST00000512590 LRRC63Q05C16 580 aa9.15□□□□□ -0.94
VCAN-208ENST00000512590 FSCN1Q16658 493 aaKnown RBP9.15□□□□□ -0.94
VCAN-208ENST00000512590 QRICH1Q2TAL8 776 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms