RNA–Protein interactions for RNA: ENST00000512476.1

TRAPPC11-209, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-209ENST00000512476 CAPN7Q9Y6W3 813 aa6.57□□□□□ -1.36
TRAPPC11-209ENST00000512476 MROH5Q6ZUA9 1318 aa6.57□□□□□ -1.36
TRAPPC11-209ENST00000512476 MADDQ8WXG6 1647 aa6.57□□□□□ -1.36
TRAPPC11-209ENST00000512476 CLTCQ00610 1675 aaKnown RBP6.56□□□□□ -1.36
TRAPPC11-209ENST00000512476 PREX1Q8TCU6 1659 aa6.56□□□□□ -1.36
TRAPPC11-209ENST00000512476 ARHGEF37A1IGU5 675 aa6.56□□□□□ -1.36
TRAPPC11-209ENST00000512476 BTBD18B2RXH4 712 aa6.56□□□□□ -1.36
TRAPPC11-209ENST00000512476 TMEM233B4DJY2 109 aa6.56□□□□□ -1.36
TRAPPC11-209ENST00000512476 SPRY1O43609 319 aaPredicted RBP6.56□□□□□ -1.36
TRAPPC11-209ENST00000512476 TADA2AO75478 443 aa6.56□□□□□ -1.36
TRAPPC11-209ENST00000512476 DGAT1O75907 488 aa6.56□□□□□ -1.36
TRAPPC11-209ENST00000512476 AKR7A3O95154 331 aa6.56□□□□□ -1.36
TRAPPC11-209ENST00000512476 MATN4O95460 622 aa6.56□□□□□ -1.36
TRAPPC11-209ENST00000512476 AMY2AP04746 511 aa6.56□□□□□ -1.36
TRAPPC11-209ENST00000512476 SELLP14151 372 aa6.56□□□□□ -1.36
TRAPPC11-209ENST00000512476 AMY2BP19961 511 aa6.56□□□□□ -1.36
TRAPPC11-209ENST00000512476 PTAFRP25105 342 aa6.56□□□□□ -1.36
TRAPPC11-209ENST00000512476 PBX3P40426 434 aa6.56□□□□□ -1.36
TRAPPC11-209ENST00000512476 STAT5BP51692 787 aa6.56□□□□□ -1.36
TRAPPC11-209ENST00000512476 BCAT1P54687 386 aa6.56□□□□□ -1.36
TRAPPC11-209ENST00000512476 BCAR1P56945 870 aa6.56□□□□□ -1.36
TRAPPC11-209ENST00000512476 RTP1P59025 263 aa6.56□□□□□ -1.36
TRAPPC11-209ENST00000512476 PRKCEQ02156 737 aa6.56□□□□□ -1.36
TRAPPC11-209ENST00000512476 GCNT1Q02742 428 aa6.56□□□□□ -1.36
TRAPPC11-209ENST00000512476 KARSQ15046 597 aaKnown RBP6.56□□□□□ -1.36
TRAPPC11-209ENST00000512476 BAK1Q16611 211 aa6.56□□□□□ -1.36
TRAPPC11-209ENST00000512476 SHEQ5VZ18 495 aa6.56□□□□□ -1.36
TRAPPC11-209ENST00000512476 ARHGAP36Q6ZRI8 547 aa6.56□□□□□ -1.36
TRAPPC11-209ENST00000512476 PPP1R3BQ86XI6 285 aa6.56□□□□□ -1.36
TRAPPC11-209ENST00000512476 CD302Q8IX05 232 aa6.56□□□□□ -1.36
TRAPPC11-209ENST00000512476 ZNF653Q96CK0 615 aa6.56□□□□□ -1.36
TRAPPC11-209ENST00000512476 MRGPRX1Q96LB2 322 aa6.56□□□□□ -1.36
TRAPPC11-209ENST00000512476 CATSPER2Q96P56 530 aa6.56□□□□□ -1.36
TRAPPC11-209ENST00000512476 TRAPPC9Q96Q05 1148 aa6.56□□□□□ -1.36
TRAPPC11-209ENST00000512476 SLC5A7Q9GZV3 580 aa6.56□□□□□ -1.36
TRAPPC11-209ENST00000512476 CATSPERZQ9NTU4 200 aa6.56□□□□□ -1.36
TRAPPC11-209ENST00000512476 RGL1Q9NZL6 768 aa6.56□□□□□ -1.36
TRAPPC11-209ENST00000512476 MORF4L1Q9UBU8 362 aa6.56□□□□□ -1.36
TRAPPC11-209ENST00000512476 MAD2L2Q9UI95 211 aa6.56□□□□□ -1.36
TRAPPC11-209ENST00000512476 IFT172Q9UG01 1749 aa6.56□□□□□ -1.36
TRAPPC11-209ENST00000512476 USP47Q96K76 1375 aa6.56□□□□□ -1.36
TRAPPC11-209ENST00000512476 PMS2P1A4D2B8 440 aa6.56□□□□□ -1.36
TRAPPC11-209ENST00000512476 C11orf95C9JLR9 678 aaPredicted RBP6.56□□□□□ -1.36
TRAPPC11-209ENST00000512476 L7N2F9 121 aa6.56□□□□□ -1.36
TRAPPC11-209ENST00000512476 GCATO75600 419 aa6.56□□□□□ -1.36
TRAPPC11-209ENST00000512476 CDKL5O76039 1030 aa6.56□□□□□ -1.36
TRAPPC11-209ENST00000512476 MYBL1P10243 752 aa6.56□□□□□ -1.36
TRAPPC11-209ENST00000512476 TRIM21P19474 475 aaKnown RBP6.56□□□□□ -1.36
TRAPPC11-209ENST00000512476 SFPQP23246 707 aaKnown RBP eCLIP6.56□□□□□ -1.36
TRAPPC11-209ENST00000512476 PTBP1P26599 531 aaKnown RBP eCLIP6.56□□□□□ -1.36
TRAPPC11-209ENST00000512476 S100A5P33763 92 aa6.56□□□□□ -1.36
TRAPPC11-209ENST00000512476 PGM1P36871 562 aa6.56□□□□□ -1.36
TRAPPC11-209ENST00000512476 STAT5AP42229 794 aa6.56□□□□□ -1.36
TRAPPC11-209ENST00000512476 IRAK1P51617 712 aa6.56□□□□□ -1.36
TRAPPC11-209ENST00000512476 MGAT5Q09328 741 aa6.56□□□□□ -1.36
TRAPPC11-209ENST00000512476 PTK6Q13882 451 aa6.56□□□□□ -1.36
TRAPPC11-209ENST00000512476 GALNT3Q14435 633 aa6.56□□□□□ -1.36
TRAPPC11-209ENST00000512476 VEPH1Q14D04 833 aa6.56□□□□□ -1.36
TRAPPC11-209ENST00000512476 TRADDQ15628 312 aa6.56□□□□□ -1.36
TRAPPC11-209ENST00000512476 HIF1AQ16665 826 aa6.56□□□□□ -1.36
TRAPPC11-209ENST00000512476 FAM173BQ6P4H8 233 aa6.56□□□□□ -1.36
TRAPPC11-209ENST00000512476 NOTUMQ6P988 496 aa6.56□□□□□ -1.36
TRAPPC11-209ENST00000512476 AOPEPQ8N6M6 819 aa6.56□□□□□ -1.36
TRAPPC11-209ENST00000512476 MAML3Q96JK9 1138 aa6.56□□□□□ -1.36
TRAPPC11-209ENST00000512476 NAA11Q9BSU3 229 aaPredicted RBP6.56□□□□□ -1.36
TRAPPC11-209ENST00000512476 NUP85Q9BW27 656 aa6.56□□□□□ -1.36
TRAPPC11-209ENST00000512476 OSBPL10Q9BXB5 764 aa6.56□□□□□ -1.36
TRAPPC11-209ENST00000512476 ASH2LQ9UBL3 628 aa6.56□□□□□ -1.36
TRAPPC11-209ENST00000512476 PCDHA1Q9Y5I3 950 aa6.56□□□□□ -1.36
TRAPPC11-209ENST00000512476 LAMC1P11047 1609 aa6.56□□□□□ -1.36
TRAPPC11-209ENST00000512476 MYOM2P54296 1465 aa6.56□□□□□ -1.36
TRAPPC11-209ENST00000512476 ROCK2O75116 1388 aaKnown RBP6.56□□□□□ -1.36
TRAPPC11-209ENST00000512476 CFAP65Q6ZU64 1925 aaKnown RBP6.56□□□□□ -1.36
TRAPPC11-209ENST00000512476 MAP3K19Q56UN5 1328 aa6.55□□□□□ -1.36
TRAPPC11-209ENST00000512476 PRSS38A1L453 326 aa6.55□□□□□ -1.36
TRAPPC11-209ENST00000512476 FRMD3A2A2Y4 597 aa6.55□□□□□ -1.36
TRAPPC11-209ENST00000512476 MTX2O75431 263 aa6.55□□□□□ -1.36
TRAPPC11-209ENST00000512476 ONECUT2O95948 504 aa6.55□□□□□ -1.36
TRAPPC11-209ENST00000512476 S100A9P06702 114 aaKnown RBP6.55□□□□□ -1.36
TRAPPC11-209ENST00000512476 EEF1DP29692 281 aaKnown RBP6.55□□□□□ -1.36
TRAPPC11-209ENST00000512476 PTGIRP43119 386 aa6.55□□□□□ -1.36
TRAPPC11-209ENST00000512476 CCR10P46092 362 aa6.55□□□□□ -1.36
TRAPPC11-209ENST00000512476 USP11P51784 963 aa6.55□□□□□ -1.36
TRAPPC11-209ENST00000512476 LGALS4P56470 323 aa6.55□□□□□ -1.36
TRAPPC11-209ENST00000512476 GMFBP60983 142 aa6.55□□□□□ -1.36
TRAPPC11-209ENST00000512476 DHX9Q08211 1270 aaKnown RBP6.55□□□□□ -1.36
TRAPPC11-209ENST00000512476 LMAN2Q12907 356 aa6.55□□□□□ -1.36
TRAPPC11-209ENST00000512476 LAMB3Q13751 1172 aa6.55□□□□□ -1.36
TRAPPC11-209ENST00000512476 RCN1Q15293 331 aa6.55□□□□□ -1.36
TRAPPC11-209ENST00000512476 XKR9Q5GH70 373 aa6.55□□□□□ -1.36
TRAPPC11-209ENST00000512476 TTI2Q6NXR4 508 aa6.55□□□□□ -1.36
TRAPPC11-209ENST00000512476 CYFIP1Q7L576 1253 aa6.55□□□□□ -1.36
TRAPPC11-209ENST00000512476 FIBCD1Q8N539 461 aa6.55□□□□□ -1.36
TRAPPC11-209ENST00000512476 OR52E1Q8NGJ3 308 aa6.55□□□□□ -1.36
TRAPPC11-209ENST00000512476 LINC00615Q96LM1 132 aaPredicted RBP6.55□□□□□ -1.36
TRAPPC11-209ENST00000512476 CARD9Q9H257 536 aa6.55□□□□□ -1.36
TRAPPC11-209ENST00000512476 VEZTQ9HBM0 779 aa6.55□□□□□ -1.36
TRAPPC11-209ENST00000512476 WDR6Q9NNW5 1121 aaKnown RBP6.55□□□□□ -1.36
TRAPPC11-209ENST00000512476 A1CFQ9NQ94 594 aaKnown RBP6.55□□□□□ -1.36
TRAPPC11-209ENST00000512476 PPP1R14DQ9NXH3 145 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms