RNA–Protein interactions for RNA: ENST00000512392.5

CHD1-208, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 2

Gene CHD1, Length 1,968 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-208ENST00000512392 BTN3A1O00481 513 aa6.56□□□□□ -1.36
CHD1-208ENST00000512392 TNPO2O14787 897 aaKnown RBP6.56□□□□□ -1.36
CHD1-208ENST00000512392 APOL3O95236 402 aa6.56□□□□□ -1.36
CHD1-208ENST00000512392 IGLV1-40P01703 118 aa6.56□□□□□ -1.36
CHD1-208ENST00000512392 CYP21A2P08686 494 aa6.56□□□□□ -1.36
CHD1-208ENST00000512392 MCM7P33993 719 aa6.56□□□□□ -1.36
CHD1-208ENST00000512392 PSMC2P35998 433 aaKnown RBP6.56□□□□□ -1.36
CHD1-208ENST00000512392 OR1G1P47890 313 aa6.56□□□□□ -1.36
CHD1-208ENST00000512392 CYP4F8P98187 520 aa6.56□□□□□ -1.36
CHD1-208ENST00000512392 PTP4A2Q12974 167 aa6.56□□□□□ -1.36
CHD1-208ENST00000512392 CAPSQ13938 189 aa6.56□□□□□ -1.36
CHD1-208ENST00000512392 STK11Q15831 433 aa6.56□□□□□ -1.36
CHD1-208ENST00000512392 MAPKAPK3Q16644 382 aa6.56□□□□□ -1.36
CHD1-208ENST00000512392 LEXMQ3ZCV2 418 aa6.56□□□□□ -1.36
CHD1-208ENST00000512392 RAB41Q5JT25 222 aa6.56□□□□□ -1.36
CHD1-208ENST00000512392 E4F1Q66K89 784 aaPredicted RBP6.56□□□□□ -1.36
CHD1-208ENST00000512392 TMEM270Q6UE05 265 aa6.56□□□□□ -1.36
CHD1-208ENST00000512392 CENPQQ7L2Z9 268 aaPredicted RBP6.56□□□□□ -1.36
CHD1-208ENST00000512392 TMC3Q7Z5M5 1100 aa6.56□□□□□ -1.36
CHD1-208ENST00000512392 SIX6OS1Q8N1H7 587 aa6.56□□□□□ -1.36
CHD1-208ENST00000512392 RTL3Q8N8U3 475 aaKnown RBP6.56□□□□□ -1.36
CHD1-208ENST00000512392 BANPQ8N9N5 519 aa6.56□□□□□ -1.36
CHD1-208ENST00000512392 GLB1L3Q8NCI6 653 aaPredicted RBP6.56□□□□□ -1.36
CHD1-208ENST00000512392 NFKBIDQ8NI38 313 aa6.56□□□□□ -1.36
CHD1-208ENST00000512392 ZNF384Q8TF68 577 aa6.56□□□□□ -1.36
CHD1-208ENST00000512392 SGCDQ92629 289 aa6.56□□□□□ -1.36
CHD1-208ENST00000512392 C3orf49Q96BT1 292 aa6.56□□□□□ -1.36
CHD1-208ENST00000512392 FCRL3Q96P31 734 aaPredicted RBP6.56□□□□□ -1.36
CHD1-208ENST00000512392 PRRX2Q99811 253 aa6.56□□□□□ -1.36
CHD1-208ENST00000512392 GLT8D2Q9H1C3 349 aa6.56□□□□□ -1.36
CHD1-208ENST00000512392 DPH5Q9H2P9 285 aa6.56□□□□□ -1.36
CHD1-208ENST00000512392 TRPV5Q9NQA5 729 aa6.56□□□□□ -1.36
CHD1-208ENST00000512392 PLA2G3Q9NZ20 509 aa6.56□□□□□ -1.36
CHD1-208ENST00000512392 SH3BP4Q9P0V3 963 aa6.56□□□□□ -1.36
CHD1-208ENST00000512392 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.56□□□□□ -1.36
CHD1-208ENST00000512392 FBXO40Q9UH90 709 aa6.56□□□□□ -1.36
CHD1-208ENST00000512392 TNFSF13BQ9Y275 285 aa6.56□□□□□ -1.36
CHD1-208ENST00000512392 CHTOPQ9Y3Y2 248 aaKnown RBP6.56□□□□□ -1.36
CHD1-208ENST00000512392 SLC4A4Q9Y6R1 1079 aa6.56□□□□□ -1.36
CHD1-208ENST00000512392 LRRIQ4A6NIV6 560 aa6.55□□□□□ -1.36
CHD1-208ENST00000512392 KPNA7A9QM74 516 aa6.55□□□□□ -1.36
CHD1-208ENST00000512392 TMEM232C9JQI7 657 aa6.55□□□□□ -1.36
CHD1-208ENST00000512392 PCDH17O14917 1159 aa6.55□□□□□ -1.36
CHD1-208ENST00000512392 RNF113AO15541 343 aaKnown RBP6.55□□□□□ -1.36
CHD1-208ENST00000512392 LRRN2O75325 713 aa6.55□□□□□ -1.36
CHD1-208ENST00000512392 PRAMEF12O95522 483 aa6.55□□□□□ -1.36
CHD1-208ENST00000512392 HMGCRP04035 888 aa6.55□□□□□ -1.36
CHD1-208ENST00000512392 SPARCP09486 303 aa6.55□□□□□ -1.36
CHD1-208ENST00000512392 EGR1P18146 543 aa6.55□□□□□ -1.36
CHD1-208ENST00000512392 ADSSP30520 456 aa6.55□□□□□ -1.36
CHD1-208ENST00000512392 PRKCIP41743 596 aa6.55□□□□□ -1.36
CHD1-208ENST00000512392 NPY4RP50391 375 aa6.55□□□□□ -1.36
CHD1-208ENST00000512392 GBX2P52951 348 aaPredicted RBP6.55□□□□□ -1.36
CHD1-208ENST00000512392 GMFBP60983 142 aa6.55□□□□□ -1.36
CHD1-208ENST00000512392 KRT17Q04695 432 aa6.55□□□□□ -1.36
CHD1-208ENST00000512392 ELP6Q0PNE2 266 aa6.55□□□□□ -1.36
CHD1-208ENST00000512392 NFIAQ12857 509 aa6.55□□□□□ -1.36
CHD1-208ENST00000512392 LMAN2Q12907 356 aa6.55□□□□□ -1.36
CHD1-208ENST00000512392 SLC13A2Q13183 592 aa6.55□□□□□ -1.36
CHD1-208ENST00000512392 RIPK1Q13546 671 aa6.55□□□□□ -1.36
CHD1-208ENST00000512392 EPHA7Q15375 998 aa6.55□□□□□ -1.36
CHD1-208ENST00000512392 KRT71Q3SY84 523 aa6.55□□□□□ -1.36
CHD1-208ENST00000512392 AADACL4Q5VUY2 407 aa6.55□□□□□ -1.36
CHD1-208ENST00000512392 CENPPQ6IPU0 288 aa6.55□□□□□ -1.36
CHD1-208ENST00000512392 OLFML1Q6UWY5 402 aa6.55□□□□□ -1.36
CHD1-208ENST00000512392 ATG14Q6ZNE5 492 aa6.55□□□□□ -1.36
CHD1-208ENST00000512392 LRRC8DQ7L1W4 858 aa6.55□□□□□ -1.36
CHD1-208ENST00000512392 CAND1Q86VP6 1230 aaKnown RBP6.55□□□□□ -1.36
CHD1-208ENST00000512392 LZTR1Q8N653 840 aa6.55□□□□□ -1.36
CHD1-208ENST00000512392 MAML3Q96JK9 1138 aa6.55□□□□□ -1.36
CHD1-208ENST00000512392 BCL7BQ9BQE9 202 aa6.55□□□□□ -1.36
CHD1-208ENST00000512392 DBNDD2Q9BQY9 259 aa6.55□□□□□ -1.36
CHD1-208ENST00000512392 EDEM2Q9BV94 578 aa6.55□□□□□ -1.36
CHD1-208ENST00000512392 DSCC1Q9BVC3 393 aa6.55□□□□□ -1.36
CHD1-208ENST00000512392 CAPS2Q9BXY5 557 aa6.55□□□□□ -1.36
CHD1-208ENST00000512392 ABCG8Q9H221 673 aa6.55□□□□□ -1.36
CHD1-208ENST00000512392 RXFP1Q9HBX9 757 aa6.55□□□□□ -1.36
CHD1-208ENST00000512392 C1GALT1Q9NS00 363 aa6.55□□□□□ -1.36
CHD1-208ENST00000512392 PRSS50Q9UI38 385 aa6.55□□□□□ -1.36
CHD1-208ENST00000512392 KCNK7Q9Y2U2 307 aa6.55□□□□□ -1.36
CHD1-208ENST00000512392 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.55□□□□□ -1.368e-10■■■□□ 17.2
CHD1-208ENST00000512392 EME2A4GXA9 379 aaPredicted RBP6.55□□□□□ -1.36
CHD1-208ENST00000512392 LIPT2A6NK58 231 aa6.55□□□□□ -1.36
CHD1-208ENST00000512392 OR6C76A6NM76 312 aa6.55□□□□□ -1.36
CHD1-208ENST00000512392 DYNC1LI2O43237 492 aaPredicted RBP6.55□□□□□ -1.36
CHD1-208ENST00000512392 OR2C1O95371 312 aa6.55□□□□□ -1.36
CHD1-208ENST00000512392 NPPAP01160 153 aa6.55□□□□□ -1.36
CHD1-208ENST00000512392 CCDC172P0C7W6 258 aa6.55□□□□□ -1.36
CHD1-208ENST00000512392 CKBP12277 381 aa6.55□□□□□ -1.36
CHD1-208ENST00000512392 CDH3P22223 829 aa6.55□□□□□ -1.36
CHD1-208ENST00000512392 PTPN3P26045 913 aa6.55□□□□□ -1.36
CHD1-208ENST00000512392 CTSKP43235 329 aa6.55□□□□□ -1.36
CHD1-208ENST00000512392 CTAG1AP78358 180 aa6.55□□□□□ -1.36
CHD1-208ENST00000512392 KCNAB2Q13303 367 aa6.55□□□□□ -1.36
CHD1-208ENST00000512392 CTBP1Q13363 440 aa6.55□□□□□ -1.36
CHD1-208ENST00000512392 PDCLQ13371 301 aa6.55□□□□□ -1.36
CHD1-208ENST00000512392 C9orf152Q5JTZ5 239 aa6.55□□□□□ -1.36
CHD1-208ENST00000512392 SHEQ5VZ18 495 aa6.55□□□□□ -1.36
CHD1-208ENST00000512392 TTI2Q6NXR4 508 aa6.55□□□□□ -1.36
CHD1-208ENST00000512392 LINC00696Q6ZRV3 163 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms