RNA–Protein interactions for RNA: ENST00000509903.5

CAST-228, Transcript of calpastatin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CAST, Length 2,171 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-228ENST00000509903 RGS7P49802 495 aa7.8□□□□□ -1.16
CAST-228ENST00000509903 SLC18A1P54219 525 aa7.8□□□□□ -1.16
CAST-228ENST00000509903 ATP11AP98196 1134 aa7.8□□□□□ -1.16
CAST-228ENST00000509903 MMRN1Q13201 1228 aa7.8□□□□□ -1.16
CAST-228ENST00000509903 MTM1Q13496 603 aa7.8□□□□□ -1.16
CAST-228ENST00000509903 NOMO1Q15155 1222 aa7.8□□□□□ -1.16
CAST-228ENST00000509903 GRIK4Q16099 956 aa7.8□□□□□ -1.16
CAST-228ENST00000509903 C15orf59Q2T9L4 293 aaPredicted RBP7.8□□□□□ -1.16
CAST-228ENST00000509903 FNBP1LQ5T0N5 605 aa7.8□□□□□ -1.16
CAST-228ENST00000509903 SCYL2Q6P3W7 929 aa7.8□□□□□ -1.16
CAST-228ENST00000509903 TBC1D1Q86TI0 1168 aaPredicted RBP7.8□□□□□ -1.16
CAST-228ENST00000509903 PEBP4Q96S96 227 aa7.8□□□□□ -1.16
CAST-228ENST00000509903 PAFAH2Q99487 392 aa7.8□□□□□ -1.16
CAST-228ENST00000509903 ACSS3Q9H6R3 686 aa7.8□□□□□ -1.16
CAST-228ENST00000509903 RXFP1Q9HBX9 757 aa7.8□□□□□ -1.16
CAST-228ENST00000509903 NGRNQ9NPE2 291 aaKnown RBP7.8□□□□□ -1.16
CAST-228ENST00000509903 HESX1Q9UBX0 185 aa7.8□□□□□ -1.16
CAST-228ENST00000509903 FETUBQ9UGM5 382 aa7.8□□□□□ -1.16
CAST-228ENST00000509903 A0A1B0GUA9 196 aa7.79□□□□□ -1.16
CAST-228ENST00000509903 TCRBV7S3A2A0A539 114 aa7.79□□□□□ -1.16
CAST-228ENST00000509903 E7ESA3 106 aa7.79□□□□□ -1.16
CAST-228ENST00000509903 KRT4P19013 534 aa7.79□□□□□ -1.16
CAST-228ENST00000509903 CYP3A5P20815 502 aa7.79□□□□□ -1.16
CAST-228ENST00000509903 VARSP26640 1264 aaKnown RBP7.79□□□□□ -1.16
CAST-228ENST00000509903 SDC4P31431 198 aa7.79□□□□□ -1.16
CAST-228ENST00000509903 MSH2P43246 934 aa7.79□□□□□ -1.16
CAST-228ENST00000509903 SNX16P57768 344 aa7.79□□□□□ -1.16
CAST-228ENST00000509903 DNAJC3Q13217 504 aa7.79□□□□□ -1.16
CAST-228ENST00000509903 DPYSL3Q14195 570 aa7.79□□□□□ -1.16
CAST-228ENST00000509903 EFTUD2Q15029 972 aaKnown RBP eCLIP7.79□□□□□ -1.16
CAST-228ENST00000509903 PDK4Q16654 411 aa7.79□□□□□ -1.16
CAST-228ENST00000509903 ZNF792Q3KQV3 632 aa7.79□□□□□ -1.16
CAST-228ENST00000509903 DCAF4L1Q3SXM0 396 aa7.79□□□□□ -1.16
CAST-228ENST00000509903 C1orf228Q6PIY5 440 aa7.79□□□□□ -1.16
CAST-228ENST00000509903 NPNTQ6UXI9 565 aa7.79□□□□□ -1.16
CAST-228ENST00000509903 PNMA8AQ86V59 439 aaPredicted RBP7.79□□□□□ -1.16
CAST-228ENST00000509903 C12orf29Q8N999 325 aa7.79□□□□□ -1.16
CAST-228ENST00000509903 SLC39A13Q96H72 371 aa7.79□□□□□ -1.16
CAST-228ENST00000509903 PIWIL1Q96J94 861 aaKnown RBP7.79□□□□□ -1.16
CAST-228ENST00000509903 C16orf70Q9BSU1 422 aa7.79□□□□□ -1.16
CAST-228ENST00000509903 ECT2Q9H8V3 914 aa7.79□□□□□ -1.16
CAST-228ENST00000509903 FAM49BQ9NUQ9 324 aa7.79□□□□□ -1.16
CAST-228ENST00000509903 KANSL3Q9P2N6 904 aa7.79□□□□□ -1.16
CAST-228ENST00000509903 CHMP2BQ9UQN3 213 aa7.79□□□□□ -1.16
CAST-228ENST00000509903 SNX9Q9Y5X1 595 aa7.79□□□□□ -1.16
CAST-228ENST00000509903 IKBKGQ9Y6K9 419 aa7.79□□□□□ -1.16
CAST-228ENST00000509903 PLXNA1Q9UIW2 1896 aa7.79□□□□□ -1.16
CAST-228ENST00000509903 A0A1W2PPM1 405 aa7.78□□□□□ -1.16
CAST-228ENST00000509903 ZWINTO95229 277 aa7.78□□□□□ -1.16
CAST-228ENST00000509903 NPTXRO95502 500 aa7.78□□□□□ -1.16
CAST-228ENST00000509903 GNALP38405 381 aa7.78□□□□□ -1.16
CAST-228ENST00000509903 YARSP54577 528 aaKnown RBP7.78□□□□□ -1.16
CAST-228ENST00000509903 BCAR1P56945 870 aa7.78□□□□□ -1.16
CAST-228ENST00000509903 NCALDP61601 193 aa7.78□□□□□ -1.16
CAST-228ENST00000509903 ELF3P78545 371 aaPredicted RBP7.78□□□□□ -1.16
CAST-228ENST00000509903 LSM11P83369 360 aaKnown RBP eCLIP7.78□□□□□ -1.16
CAST-228ENST00000509903 SETDB1Q15047 1291 aa7.78□□□□□ -1.16
CAST-228ENST00000509903 PDK2Q15119 407 aa7.78□□□□□ -1.16
CAST-228ENST00000509903 KIZQ2M2Z5 673 aa7.78□□□□□ -1.16
CAST-228ENST00000509903 BOLA3Q53S33 107 aa7.78□□□□□ -1.16
CAST-228ENST00000509903 TJAP1Q5JTD0 557 aa7.78□□□□□ -1.16
CAST-228ENST00000509903 RNF43Q68DV7 783 aa7.78□□□□□ -1.16
CAST-228ENST00000509903 CGB2Q6NT52 195 aa7.78□□□□□ -1.16
CAST-228ENST00000509903 TRNP1Q6NT89 227 aa7.78□□□□□ -1.16
CAST-228ENST00000509903 USP50Q70EL3 339 aaPredicted RBP7.78□□□□□ -1.16
CAST-228ENST00000509903 ACOT1Q86TX2 421 aa7.78□□□□□ -1.16
CAST-228ENST00000509903 ZNF410Q86VK4 478 aa7.78□□□□□ -1.16
CAST-228ENST00000509903 SESTD1Q86VW0 696 aa7.78□□□□□ -1.16
CAST-228ENST00000509903 CCDC116Q8IYX3 515 aa7.78□□□□□ -1.16
CAST-228ENST00000509903 FITM2Q8N6M3 262 aa7.78□□□□□ -1.16
CAST-228ENST00000509903 DENND1AQ8TEH3 1009 aa7.78□□□□□ -1.16
CAST-228ENST00000509903 FAM172AQ8WUF8 416 aa7.78□□□□□ -1.16
CAST-228ENST00000509903 FAF2Q96CS3 445 aa7.78□□□□□ -1.16
CAST-228ENST00000509903 KLHL29Q96CT2 875 aa7.78□□□□□ -1.16
CAST-228ENST00000509903 RMDN2Q96LZ7 410 aa7.78□□□□□ -1.16
CAST-228ENST00000509903 RNF157Q96PX1 679 aa7.78□□□□□ -1.16
CAST-228ENST00000509903 CYTH2Q99418 400 aa7.78□□□□□ -1.16
CAST-228ENST00000509903 GBA2Q9HCG7 927 aaPredicted RBP7.78□□□□□ -1.16
CAST-228ENST00000509903 CD248Q9HCU0 757 aa7.78□□□□□ -1.16
CAST-228ENST00000509903 ZMYND8Q9ULU4 1186 aaPredicted RBP7.78□□□□□ -1.16
CAST-228ENST00000509903 PHTF1Q9UMS5 762 aa7.78□□□□□ -1.16
CAST-228ENST00000509903 STARD13Q9Y3M8 1113 aa7.78□□□□□ -1.16
CAST-228ENST00000509903 C11orf97A0A1B0GVM6 126 aaPredicted RBP7.78□□□□□ -1.16
CAST-228ENST00000509903 CFAP69A5D8W1 941 aa7.78□□□□□ -1.16
CAST-228ENST00000509903 APOL1O14791 398 aa7.78□□□□□ -1.16
CAST-228ENST00000509903 KCNN4O15554 427 aa7.78□□□□□ -1.16
CAST-228ENST00000509903 TYROBPO43914 113 aa7.78□□□□□ -1.16
CAST-228ENST00000509903 MGRN1O60291 552 aa7.78□□□□□ -1.16
CAST-228ENST00000509903 PIAS1O75925 651 aa7.78□□□□□ -1.16
CAST-228ENST00000509903 ENDOD1O94919 500 aa7.78□□□□□ -1.16
CAST-228ENST00000509903 ZBED1O96006 694 aa7.78□□□□□ -1.16
CAST-228ENST00000509903 PFKMP08237 780 aa7.78□□□□□ -1.16
CAST-228ENST00000509903 SETSIPP0DME0 302 aa7.78□□□□□ -1.16
CAST-228ENST00000509903 TSHRP16473 764 aa7.78□□□□□ -1.16
CAST-228ENST00000509903 GSTT1P30711 240 aa7.78□□□□□ -1.16
CAST-228ENST00000509903 EPHX2P34913 555 aa7.78□□□□□ -1.16
CAST-228ENST00000509903 NRLP54845 237 aa7.78□□□□□ -1.16
CAST-228ENST00000509903 YWHAGP61981 247 aaKnown RBP eCLIP7.78□□□□□ -1.16
CAST-228ENST00000509903 BNIP1Q12981 228 aa7.78□□□□□ -1.16
CAST-228ENST00000509903 CAMK2GQ13555 558 aaPredicted RBP7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms