RNA–Protein interactions for RNA: ENST00000508685.1

SH3RF1-203, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 1 (best)

Gene SH3RF1, Length 2,020 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-203ENST00000508685 TSPAN18Q96SJ8 248 aa11.42□□□□□ -0.58
SH3RF1-203ENST00000508685 CNPY3Q9BT09 278 aa11.42□□□□□ -0.58
SH3RF1-203ENST00000508685 MAK16Q9BXY0 300 aaKnown RBP11.42□□□□□ -0.58
SH3RF1-203ENST00000508685 TRIM55Q9BYV6 548 aa11.42□□□□□ -0.58
SH3RF1-203ENST00000508685 RSAD1Q9HA92 442 aa11.42□□□□□ -0.58
SH3RF1-203ENST00000508685 CHST12Q9NRB3 414 aa11.42□□□□□ -0.58
SH3RF1-203ENST00000508685 ASNSD1Q9NWL6 643 aa11.42□□□□□ -0.58
SH3RF1-203ENST00000508685 SUFUQ9UMX1 484 aa11.42□□□□□ -0.58
SH3RF1-203ENST00000508685 NOD1Q9Y239 953 aa11.42□□□□□ -0.58
SH3RF1-203ENST00000508685 MTO1Q9Y2Z2 717 aaKnown RBP11.42□□□□□ -0.58
SH3RF1-203ENST00000508685 LRRC42Q9Y546 428 aa11.42□□□□□ -0.58
SH3RF1-203ENST00000508685 CASTOR2A6NHX0 329 aa11.42□□□□□ -0.58
SH3RF1-203ENST00000508685 CLDN5O00501 218 aa11.42□□□□□ -0.58
SH3RF1-203ENST00000508685 CST8O60676 142 aa11.42□□□□□ -0.58
SH3RF1-203ENST00000508685 TRUB2O95900 331 aaKnown RBP11.42□□□□□ -0.58
SH3RF1-203ENST00000508685 LCP1P13796 627 aa11.42□□□□□ -0.58
SH3RF1-203ENST00000508685 TFE3P19532 575 aaPredicted RBP11.42□□□□□ -0.58
SH3RF1-203ENST00000508685 ACLYP53396 1101 aa11.42□□□□□ -0.58
SH3RF1-203ENST00000508685 BCAT1P54687 386 aa11.42□□□□□ -0.58
SH3RF1-203ENST00000508685 PRMT2P55345 433 aa11.42□□□□□ -0.58
SH3RF1-203ENST00000508685 SLC6A3Q01959 620 aa11.42□□□□□ -0.58
SH3RF1-203ENST00000508685 LPIN1Q14693 890 aa11.42□□□□□ -0.58
SH3RF1-203ENST00000508685 FASTKD3Q14CZ7 662 aaKnown RBP11.42□□□□□ -0.58
SH3RF1-203ENST00000508685 ANKRD20A2Q5SQ80 823 aa11.42□□□□□ -0.58
SH3RF1-203ENST00000508685 ANKRD20A1Q5TYW2 823 aa11.42□□□□□ -0.58
SH3RF1-203ENST00000508685 ANKRD20A3Q5VUR7 823 aa11.42□□□□□ -0.58
SH3RF1-203ENST00000508685 APLFQ8IW19 511 aaPredicted RBP11.42□□□□□ -0.58
SH3RF1-203ENST00000508685 TRIM42Q8IWZ5 723 aa11.42□□□□□ -0.58
SH3RF1-203ENST00000508685 TOP6BLQ8N6T0 577 aa11.42□□□□□ -0.58
SH3RF1-203ENST00000508685 BANPQ8N9N5 519 aa11.42□□□□□ -0.58
SH3RF1-203ENST00000508685 PCSK9Q8NBP7 692 aaKnown RBP11.42□□□□□ -0.58
SH3RF1-203ENST00000508685 KCTD6Q8NC69 237 aa11.42□□□□□ -0.58
SH3RF1-203ENST00000508685 CMASQ8NFW8 434 aaPredicted RBP11.42□□□□□ -0.58
SH3RF1-203ENST00000508685 STK32AQ8WU08 396 aa11.42□□□□□ -0.58
SH3RF1-203ENST00000508685 PAFAH2Q99487 392 aa11.42□□□□□ -0.58
SH3RF1-203ENST00000508685 CALN1Q9BXU9 219 aa11.42□□□□□ -0.58
SH3RF1-203ENST00000508685 ADAM33Q9BZ11 813 aa11.42□□□□□ -0.58
SH3RF1-203ENST00000508685 MANSC1Q9H8J5 431 aa11.42□□□□□ -0.58
SH3RF1-203ENST00000508685 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.42□□□□□ -0.58
SH3RF1-203ENST00000508685 TIMM13Q9Y5L4 95 aaPredicted RBP11.42□□□□□ -0.58
SH3RF1-203ENST00000508685 IKBKGQ9Y6K9 419 aa11.42□□□□□ -0.58
SH3RF1-203ENST00000508685 A0A1W2PPM1 405 aa11.41□□□□□ -0.58
SH3RF1-203ENST00000508685 MCF2LO15068 1137 aa11.41□□□□□ -0.58
SH3RF1-203ENST00000508685 CCDC22O60826 627 aa11.41□□□□□ -0.58
SH3RF1-203ENST00000508685 DNAJC6O75061 913 aa11.41□□□□□ -0.58
SH3RF1-203ENST00000508685 BEST1O76090 585 aa11.41□□□□□ -0.58
SH3RF1-203ENST00000508685 POMCP01189 267 aa11.41□□□□□ -0.58
SH3RF1-203ENST00000508685 MT-ND3P03897 115 aa11.41□□□□□ -0.58
SH3RF1-203ENST00000508685 SETSIPP0DME0 302 aa11.41□□□□□ -0.58
SH3RF1-203ENST00000508685 RPL22P35268 128 aaKnown RBP11.41□□□□□ -0.58
SH3RF1-203ENST00000508685 PCK1P35558 622 aa11.41□□□□□ -0.58
SH3RF1-203ENST00000508685 MMRN1Q13201 1228 aa11.41□□□□□ -0.58
SH3RF1-203ENST00000508685 PAN2Q504Q3 1202 aaKnown RBP11.41□□□□□ -0.58
SH3RF1-203ENST00000508685 LGSNQ5TDP6 509 aa11.41□□□□□ -0.58
SH3RF1-203ENST00000508685 KIAA0319Q5VV43 1072 aa11.41□□□□□ -0.58
SH3RF1-203ENST00000508685 RNF180Q86T96 592 aa11.41□□□□□ -0.58
SH3RF1-203ENST00000508685 LONP2Q86WA8 852 aa11.41□□□□□ -0.58
SH3RF1-203ENST00000508685 RAET1EQ8TD07 263 aa11.41□□□□□ -0.58
SH3RF1-203ENST00000508685 FAM172AQ8WUF8 416 aa11.41□□□□□ -0.58
SH3RF1-203ENST00000508685 UTP4Q969X6 686 aaKnown RBP11.41□□□□□ -0.58
SH3RF1-203ENST00000508685 SLC7A6OSQ96CW6 309 aaPredicted RBP11.41□□□□□ -0.58
SH3RF1-203ENST00000508685 TNIP3Q96KP6 325 aa11.41□□□□□ -0.58
SH3RF1-203ENST00000508685 TBC1D10AQ9BXI6 508 aa11.41□□□□□ -0.58
SH3RF1-203ENST00000508685 C10orf88Q9H8K7 445 aa11.41□□□□□ -0.58
SH3RF1-203ENST00000508685 SLCO1B3Q9NPD5 702 aa11.41□□□□□ -0.58
SH3RF1-203ENST00000508685 NGRNQ9NPE2 291 aaKnown RBP11.41□□□□□ -0.58
SH3RF1-203ENST00000508685 SLC38A7Q9NVC3 462 aa11.41□□□□□ -0.58
SH3RF1-203ENST00000508685 HAO1Q9UJM8 370 aa11.41□□□□□ -0.58
SH3RF1-203ENST00000508685 TRIM33Q9UPN9 1127 aa11.41□□□□□ -0.58
SH3RF1-203ENST00000508685 CLUHO75153 1309 aa11.41□□□□□ -0.58
SH3RF1-203ENST00000508685 GSTA2P09210 222 aa11.4□□□□□ -0.58
SH3RF1-203ENST00000508685 T-ENOLP0DO92 83 aa11.4□□□□□ -0.58
SH3RF1-203ENST00000508685 GNAZP19086 355 aa11.4□□□□□ -0.58
SH3RF1-203ENST00000508685 WARSP23381 471 aaKnown RBP11.4□□□□□ -0.58
SH3RF1-203ENST00000508685 TARSP26639 723 aaKnown RBP11.4□□□□□ -0.58
SH3RF1-203ENST00000508685 SDC4P31431 198 aa11.4□□□□□ -0.58
SH3RF1-203ENST00000508685 TFDP2Q14188 446 aa11.4□□□□□ -0.58
SH3RF1-203ENST00000508685 SCYL2Q6P3W7 929 aa11.4□□□□□ -0.58
SH3RF1-203ENST00000508685 C4orf22Q6V702 233 aa11.4□□□□□ -0.58
SH3RF1-203ENST00000508685 BZW1Q7L1Q6 419 aaKnown RBP11.4□□□□□ -0.58
SH3RF1-203ENST00000508685 HACE1Q8IYU2 909 aa11.4□□□□□ -0.58
SH3RF1-203ENST00000508685 FBXO36Q8NEA4 188 aa11.4□□□□□ -0.58
SH3RF1-203ENST00000508685 MZB1Q8WU39 189 aa11.4□□□□□ -0.58
SH3RF1-203ENST00000508685 DCAKDQ8WVC6 231 aa11.4□□□□□ -0.58
SH3RF1-203ENST00000508685 SENP8Q96LD8 212 aa11.4□□□□□ -0.58
SH3RF1-203ENST00000508685 ADAM2Q99965 735 aa11.4□□□□□ -0.58
SH3RF1-203ENST00000508685 DCLRE1BQ9H816 532 aa11.4□□□□□ -0.58
SH3RF1-203ENST00000508685 KIF9Q9HAQ2 790 aa11.4□□□□□ -0.58
SH3RF1-203ENST00000508685 PNPLA8Q9NP80 782 aa11.4□□□□□ -0.58
SH3RF1-203ENST00000508685 XPO7Q9UIA9 1087 aaKnown RBP11.4□□□□□ -0.58
SH3RF1-203ENST00000508685 GRID1Q9ULK0 1009 aa11.4□□□□□ -0.58
SH3RF1-203ENST00000508685 A8MUI8 341 aa11.4□□□□□ -0.59
SH3RF1-203ENST00000508685 I3L4J1 428 aa11.4□□□□□ -0.59
SH3RF1-203ENST00000508685 GABRDO14764 452 aa11.4□□□□□ -0.59
SH3RF1-203ENST00000508685 KLF11O14901 512 aa11.4□□□□□ -0.59
SH3RF1-203ENST00000508685 PRPSAP2O60256 369 aa11.4□□□□□ -0.59
SH3RF1-203ENST00000508685 ATP5BP06576 529 aaKnown RBP11.4□□□□□ -0.59
SH3RF1-203ENST00000508685 GCKP35557 465 aa11.4□□□□□ -0.59
SH3RF1-203ENST00000508685 ATXN1P54253 815 aaKnown RBP11.4□□□□□ -0.59
SH3RF1-203ENST00000508685 EIF3EP60228 445 aaKnown RBP11.4□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms