RNA–Protein interactions for RNA: ENST00000508524.1

TOPBP1-206, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 618 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-206ENST00000508524 HARSP12081 509 aaKnown RBP6.14□□□□□ -1.43
TOPBP1-206ENST00000508524 PECAM1P16284 738 aaPredicted RBP6.14□□□□□ -1.43
TOPBP1-206ENST00000508524 GNALP38405 381 aa6.14□□□□□ -1.43
TOPBP1-206ENST00000508524 PLCD1P51178 756 aa6.14□□□□□ -1.43
TOPBP1-206ENST00000508524 GAB1Q13480 694 aa6.14□□□□□ -1.43
TOPBP1-206ENST00000508524 ATP1A4Q13733 1029 aa6.14□□□□□ -1.43
TOPBP1-206ENST00000508524 CCAR1Q8IX12 1150 aaKnown RBP6.14□□□□□ -1.43
TOPBP1-206ENST00000508524 GLIS1Q8NBF1 620 aa6.14□□□□□ -1.43
TOPBP1-206ENST00000508524 P2RY11Q96G91 374 aa6.14□□□□□ -1.43
TOPBP1-206ENST00000508524 FCRL5Q96RD9 977 aa6.14□□□□□ -1.43
TOPBP1-206ENST00000508524 GATA5Q9BWX5 397 aaPredicted RBP6.14□□□□□ -1.43
TOPBP1-206ENST00000508524 ARL8BQ9NVJ2 186 aa6.14□□□□□ -1.43
TOPBP1-206ENST00000508524 PRYO14603 147 aa6.13□□□□□ -1.43
TOPBP1-206ENST00000508524 ZSCAN9O15535 394 aaPredicted RBP6.13□□□□□ -1.43
TOPBP1-206ENST00000508524 DHHO43323 396 aa6.13□□□□□ -1.43
TOPBP1-206ENST00000508524 PLAUP00749 431 aa6.13□□□□□ -1.43
TOPBP1-206ENST00000508524 TNFSF4P23510 183 aa6.13□□□□□ -1.43
TOPBP1-206ENST00000508524 DUSP1P28562 367 aa6.13□□□□□ -1.43
TOPBP1-206ENST00000508524 IDUAP35475 653 aa6.13□□□□□ -1.43
TOPBP1-206ENST00000508524 BFSP2Q13515 415 aa6.13□□□□□ -1.43
TOPBP1-206ENST00000508524 HLTFQ14527 1009 aaKnown RBP eCLIP6.13□□□□□ -1.43
TOPBP1-206ENST00000508524 CNGA3Q16281 694 aa6.13□□□□□ -1.43
TOPBP1-206ENST00000508524 FAM110CQ1W6H9 321 aa6.13□□□□□ -1.43
TOPBP1-206ENST00000508524 SLC35G1Q2M3R5 365 aa6.13□□□□□ -1.43
TOPBP1-206ENST00000508524 ARL13BQ3SXY8 428 aa6.13□□□□□ -1.43
TOPBP1-206ENST00000508524 SLC9C1Q4G0N8 1177 aa6.13□□□□□ -1.43
TOPBP1-206ENST00000508524 ARHGAP15Q53QZ3 475 aa6.13□□□□□ -1.43
TOPBP1-206ENST00000508524 TLDC1Q6P9B6 456 aa6.13□□□□□ -1.43
TOPBP1-206ENST00000508524 IRF2BP2Q7Z5L9 587 aa6.13□□□□□ -1.43
TOPBP1-206ENST00000508524 RGL1Q9NZL6 768 aa6.13□□□□□ -1.43
TOPBP1-206ENST00000508524 CCDC187A0A096LP49 1063 aa6.12□□□□□ -1.43
TOPBP1-206ENST00000508524 ANO9A1A5B4 782 aa6.12□□□□□ -1.43
TOPBP1-206ENST00000508524 FAM234BA2RU67 622 aa6.12□□□□□ -1.43
TOPBP1-206ENST00000508524 C2CD4BA6NLJ0 364 aa6.12□□□□□ -1.43
TOPBP1-206ENST00000508524 RASA4BC9J798 803 aa6.12□□□□□ -1.43
TOPBP1-206ENST00000508524 RASA4O43374 803 aa6.12□□□□□ -1.43
TOPBP1-206ENST00000508524 FGF18O76093 207 aa6.12□□□□□ -1.43
TOPBP1-206ENST00000508524 IDEP14735 1019 aa6.12□□□□□ -1.43
TOPBP1-206ENST00000508524 MATN1P21941 496 aa6.12□□□□□ -1.43
TOPBP1-206ENST00000508524 NDUFS1P28331 727 aa6.12□□□□□ -1.43
TOPBP1-206ENST00000508524 HOXA7P31268 230 aaPredicted RBP6.12□□□□□ -1.43
TOPBP1-206ENST00000508524 IGHMBP2P38935 993 aaKnown RBP6.12□□□□□ -1.43
TOPBP1-206ENST00000508524 CCT4P50991 539 aaKnown RBP6.12□□□□□ -1.43
TOPBP1-206ENST00000508524 SMARCA2P51531 1590 aa6.12□□□□□ -1.43
TOPBP1-206ENST00000508524 FAM209BQ5JX69 171 aa6.12□□□□□ -1.43
TOPBP1-206ENST00000508524 ZCCHC6Q5VYS8 1495 aaKnown RBP6.12□□□□□ -1.43
TOPBP1-206ENST00000508524 PIK3AP1Q6ZUJ8 805 aa6.12□□□□□ -1.43
TOPBP1-206ENST00000508524 ANKRD13BQ86YJ7 626 aa6.12□□□□□ -1.43
TOPBP1-206ENST00000508524 BRI3BPQ8WY22 251 aa6.12□□□□□ -1.43
TOPBP1-206ENST00000508524 OVCA2Q8WZ82 227 aa6.12□□□□□ -1.43
TOPBP1-206ENST00000508524 AKAP1Q92667 903 aaKnown RBP eCLIP6.12□□□□□ -1.43
TOPBP1-206ENST00000508524 GRAMD1AQ96CP6 724 aa6.12□□□□□ -1.43
TOPBP1-206ENST00000508524 EIF2AQ9BY44 585 aaKnown RBP6.12□□□□□ -1.43
TOPBP1-206ENST00000508524 HEY2Q9UBP5 337 aa6.12□□□□□ -1.43
TOPBP1-206ENST00000508524 HEMK1Q9Y5R4 338 aaPredicted RBP6.12□□□□□ -1.43
TOPBP1-206ENST00000508524 SIRT4Q9Y6E7 314 aaPredicted RBP6.12□□□□□ -1.43
TOPBP1-206ENST00000508524 VIPP01282 170 aa6.11□□□□□ -1.43
TOPBP1-206ENST00000508524 ALADP13716 330 aa6.11□□□□□ -1.43
TOPBP1-206ENST00000508524 STIM1Q13586 685 aa6.11□□□□□ -1.43
TOPBP1-206ENST00000508524 MAPKAPK3Q16644 382 aa6.11□□□□□ -1.43
TOPBP1-206ENST00000508524 ZNF260Q3ZCT1 412 aa6.11□□□□□ -1.43
TOPBP1-206ENST00000508524 EARS2Q5JPH6 523 aaKnown RBP6.11□□□□□ -1.43
TOPBP1-206ENST00000508524 CCDC144NLQ6NUI1 221 aa6.11□□□□□ -1.43
TOPBP1-206ENST00000508524 DPP9Q86TI2 863 aa6.11□□□□□ -1.43
TOPBP1-206ENST00000508524 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.11□□□□□ -1.43
TOPBP1-206ENST00000508524 TXLNBQ8N3L3 684 aa6.11□□□□□ -1.43
TOPBP1-206ENST00000508524 OR2C3Q8N628 320 aa6.11□□□□□ -1.43
TOPBP1-206ENST00000508524 TRMT61AQ96FX7 289 aaKnown RBP6.11□□□□□ -1.43
TOPBP1-206ENST00000508524 VCPIP1Q96JH7 1222 aa6.11□□□□□ -1.43
TOPBP1-206ENST00000508524 NUDT22Q9BRQ3 303 aa6.11□□□□□ -1.43
TOPBP1-206ENST00000508524 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.11□□□□□ -1.43
TOPBP1-206ENST00000508524 DCAF1Q9Y4B6 1507 aa6.1□□□□□ -1.43
TOPBP1-206ENST00000508524 NCAPD3P42695 1498 aa6.1□□□□□ -1.43
TOPBP1-206ENST00000508524 SLC22A23A1A5C7 686 aa6.1□□□□□ -1.43
TOPBP1-206ENST00000508524 M0QZQ0 153 aa6.1□□□□□ -1.43
TOPBP1-206ENST00000508524 NTN1O95631 604 aa6.1□□□□□ -1.43
TOPBP1-206ENST00000508524 TMEM191BP0C7N4 346 aa6.1□□□□□ -1.43
TOPBP1-206ENST00000508524 ITGB6P18564 788 aa6.1□□□□□ -1.43
TOPBP1-206ENST00000508524 RPS6KB1P23443 525 aa6.1□□□□□ -1.43
TOPBP1-206ENST00000508524 HOXD12P35452 270 aa6.1□□□□□ -1.43
TOPBP1-206ENST00000508524 VPS41P49754 854 aa6.1□□□□□ -1.43
TOPBP1-206ENST00000508524 NSUN2Q08J23 767 aaKnown RBP eCLIP6.1□□□□□ -1.43
TOPBP1-206ENST00000508524 MAPK7Q13164 816 aa6.1□□□□□ -1.43
TOPBP1-206ENST00000508524 SEMA3BQ13214 749 aa6.1□□□□□ -1.43
TOPBP1-206ENST00000508524 LONRF1Q17RB8 773 aa6.1□□□□□ -1.43
TOPBP1-206ENST00000508524 ACSM6Q6P461 480 aa6.1□□□□□ -1.43
TOPBP1-206ENST00000508524 KSR2Q6VAB6 950 aa6.1□□□□□ -1.43
TOPBP1-206ENST00000508524 KYAT3Q6YP21 454 aaKnown RBP6.1□□□□□ -1.43
TOPBP1-206ENST00000508524 RBM44Q6ZP01 1051 aaKnown RBP6.1□□□□□ -1.43
TOPBP1-206ENST00000508524 C11orf96Q7Z7L8 435 aa6.1□□□□□ -1.43
TOPBP1-206ENST00000508524 RFX6Q8HWS3 928 aa6.1□□□□□ -1.43
TOPBP1-206ENST00000508524 OR52L2PQ8NGH6 319 aa6.1□□□□□ -1.43
TOPBP1-206ENST00000508524 PIGKQ92643 395 aa6.1□□□□□ -1.43
TOPBP1-206ENST00000508524 RIPOR3Q96MK2 946 aa6.1□□□□□ -1.43
TOPBP1-206ENST00000508524 SCNM1Q9BWG6 230 aa6.1□□□□□ -1.43
TOPBP1-206ENST00000508524 CDCP1Q9H5V8 836 aa6.1□□□□□ -1.43
TOPBP1-206ENST00000508524 ASNSD1Q9NWL6 643 aa6.1□□□□□ -1.43
TOPBP1-206ENST00000508524 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.1□□□□□ -1.43
TOPBP1-206ENST00000508524 CTIFO43310 598 aaKnown RBP6.09□□□□□ -1.43
TOPBP1-206ENST00000508524 KCNAB3O43448 404 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms