RNA–Protein interactions for RNA: ENST00000508387.5

NR1I3-225, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 634 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-225ENST00000508387 USP39Q53GS9 565 aaKnown RBP13.4□□□□□ -0.26
NR1I3-225ENST00000508387 HSP90AA4PQ58FG1 418 aa13.4□□□□□ -0.26
NR1I3-225ENST00000508387 TMEFF1Q8IYR6 380 aa13.4□□□□□ -0.26
NR1I3-225ENST00000508387 CHPFQ8IZ52 775 aa13.4□□□□□ -0.26
NR1I3-225ENST00000508387 PGBD3Q8N328 593 aa13.4□□□□□ -0.26
NR1I3-225ENST00000508387 C12orf50Q8NA57 414 aaPredicted RBP13.4□□□□□ -0.26
NR1I3-225ENST00000508387 SORCS1Q8WY21 1168 aa13.4□□□□□ -0.26
NR1I3-225ENST00000508387 PLD4Q96BZ4 506 aa13.4□□□□□ -0.26
NR1I3-225ENST00000508387 MYEOVQ96EZ4 313 aa13.4□□□□□ -0.26
NR1I3-225ENST00000508387 CDK5RAP1Q96SZ6 601 aaKnown RBP13.4□□□□□ -0.26
NR1I3-225ENST00000508387 RTKNQ9BST9 563 aa13.4□□□□□ -0.26
NR1I3-225ENST00000508387 CLSTN2Q9H4D0 955 aa13.4□□□□□ -0.26
NR1I3-225ENST00000508387 UBE2TQ9NPD8 197 aaPredicted RBP13.4□□□□□ -0.26
NR1I3-225ENST00000508387 FBXO10Q9UK96 956 aa13.4□□□□□ -0.26
NR1I3-225ENST00000508387 STRIP2Q9ULQ0 834 aa13.4□□□□□ -0.26
NR1I3-225ENST00000508387 STARD13Q9Y3M8 1113 aa13.4□□□□□ -0.26
NR1I3-225ENST00000508387 ABCA7Q8IZY2 2146 aa13.4□□□□□ -0.26
NR1I3-225ENST00000508387 CEP250Q9BV73 2442 aa13.39□□□□□ -0.27
NR1I3-225ENST00000508387 GOLGA6L7A0A1B0GV03 622 aa13.39□□□□□ -0.27
NR1I3-225ENST00000508387 FAM170AA1A519 330 aa13.39□□□□□ -0.27
NR1I3-225ENST00000508387 BCLAF3A2AJT9 711 aaKnown RBP13.39□□□□□ -0.27
NR1I3-225ENST00000508387 BECN2A8MW95 431 aa13.39□□□□□ -0.27
NR1I3-225ENST00000508387 ALDH1A2O94788 518 aa13.39□□□□□ -0.27
NR1I3-225ENST00000508387 RHOBTB1O94844 696 aa13.39□□□□□ -0.27
NR1I3-225ENST00000508387 GNA14O95837 355 aa13.39□□□□□ -0.27
NR1I3-225ENST00000508387 FYNP06241 537 aa13.39□□□□□ -0.27
NR1I3-225ENST00000508387 PNMA6AP0CW24 399 aaPredicted RBP13.39□□□□□ -0.27
NR1I3-225ENST00000508387 KCNA4P22459 653 aa13.39□□□□□ -0.27
NR1I3-225ENST00000508387 HOXD9P28356 352 aaPredicted RBP13.39□□□□□ -0.27
NR1I3-225ENST00000508387 IL12RB1P42701 662 aa13.39□□□□□ -0.27
NR1I3-225ENST00000508387 PTGER3P43115 390 aa13.39□□□□□ -0.27
NR1I3-225ENST00000508387 DHPSP49366 369 aaPredicted RBP13.39□□□□□ -0.27
NR1I3-225ENST00000508387 ARHGAP44Q17R89 818 aa13.39□□□□□ -0.27
NR1I3-225ENST00000508387 TMEM215Q68D42 235 aa13.39□□□□□ -0.27
NR1I3-225ENST00000508387 TRIM65Q6PJ69 517 aa13.39□□□□□ -0.27
NR1I3-225ENST00000508387 FAM217AQ8IXS0 508 aa13.39□□□□□ -0.27
NR1I3-225ENST00000508387 WFDC5Q8TCV5 224 aa13.39□□□□□ -0.27
NR1I3-225ENST00000508387 IPO4Q8TEX9 1081 aaKnown RBP13.39□□□□□ -0.27
NR1I3-225ENST00000508387 RNF139Q8WU17 664 aa13.39□□□□□ -0.27
NR1I3-225ENST00000508387 PIWIL1Q96J94 861 aaKnown RBP13.39□□□□□ -0.27
NR1I3-225ENST00000508387 GABRG3Q99928 467 aa13.39□□□□□ -0.27
NR1I3-225ENST00000508387 FSCN3Q9NQT6 498 aa13.39□□□□□ -0.27
NR1I3-225ENST00000508387 CNGB3Q9NQW8 809 aa13.39□□□□□ -0.27
NR1I3-225ENST00000508387 KIAA1257Q9ULG3 409 aa13.39□□□□□ -0.27
NR1I3-225ENST00000508387 CNTN6Q9UQ52 1028 aa13.39□□□□□ -0.27
NR1I3-225ENST00000508387 PCDHGA5Q9Y5G8 931 aa13.39□□□□□ -0.27
NR1I3-225ENST00000508387 MYO18AQ92614 2054 aaKnown RBP13.39□□□□□ -0.27
NR1I3-225ENST00000508387 CEP192Q8TEP8 1941 aa13.39□□□□□ -0.27
NR1I3-225ENST00000508387 SDK1Q7Z5N4 2213 aa13.38□□□□□ -0.27
NR1I3-225ENST00000508387 GFRA2O00451 464 aa13.38□□□□□ -0.27
NR1I3-225ENST00000508387 CAVIN2O95810 425 aa13.38□□□□□ -0.27
NR1I3-225ENST00000508387 LTFP02788 710 aa13.38□□□□□ -0.27
NR1I3-225ENST00000508387 SLC6A4P31645 630 aa13.38□□□□□ -0.27
NR1I3-225ENST00000508387 GPD2P43304 727 aa13.38□□□□□ -0.27
NR1I3-225ENST00000508387 CETN1Q12798 172 aa13.38□□□□□ -0.27
NR1I3-225ENST00000508387 MSANTD2Q6P1R3 559 aa13.38□□□□□ -0.27
NR1I3-225ENST00000508387 RFWD3Q6PCD5 774 aa13.38□□□□□ -0.27
NR1I3-225ENST00000508387 CYP2U1Q7Z449 544 aa13.38□□□□□ -0.27
NR1I3-225ENST00000508387 CACUL1Q86Y37 369 aa13.38□□□□□ -0.27
NR1I3-225ENST00000508387 SCML4Q8N228 414 aa13.38□□□□□ -0.27
NR1I3-225ENST00000508387 CPXM2Q8N436 756 aa13.38□□□□□ -0.27
NR1I3-225ENST00000508387 ADAM32Q8TC27 787 aa13.38□□□□□ -0.27
NR1I3-225ENST00000508387 DDI1Q8WTU0 396 aa13.38□□□□□ -0.27
NR1I3-225ENST00000508387 EDEM2Q9BV94 578 aa13.38□□□□□ -0.27
NR1I3-225ENST00000508387 DCLK3Q9C098 648 aa13.38□□□□□ -0.27
NR1I3-225ENST00000508387 SIX2Q9NPC8 291 aa13.38□□□□□ -0.27
NR1I3-225ENST00000508387 ST7Q9NRC1 585 aa13.38□□□□□ -0.27
NR1I3-225ENST00000508387 VPS45Q9NRW7 570 aa13.38□□□□□ -0.27
NR1I3-225ENST00000508387 ABCC13Q9NSE7 274 aa13.38□□□□□ -0.27
NR1I3-225ENST00000508387 OLA1Q9NTK5 396 aaKnown RBP13.38□□□□□ -0.27
NR1I3-225ENST00000508387 TMEM74BQ9NUR3 256 aa13.38□□□□□ -0.27
NR1I3-225ENST00000508387 CYP8B1Q9UNU6 501 aa13.38□□□□□ -0.27
NR1I3-225ENST00000508387 NAALADL1Q9UQQ1 740 aa13.38□□□□□ -0.27
NR1I3-225ENST00000508387 ZNF510Q9Y2H8 683 aa13.38□□□□□ -0.27
NR1I3-225ENST00000508387 CACNA1AO00555 2505 aa13.37□□□□□ -0.27
NR1I3-225ENST00000508387 LNP1A1A4G5 178 aa13.37□□□□□ -0.27
NR1I3-225ENST00000508387 E5RJQ4 531 aa13.37□□□□□ -0.27
NR1I3-225ENST00000508387 LETM1O95202 739 aaPredicted RBP13.37□□□□□ -0.27
NR1I3-225ENST00000508387 IGLV3-27P01718 113 aa13.37□□□□□ -0.27
NR1I3-225ENST00000508387 PRKCHP24723 683 aa13.37□□□□□ -0.27
NR1I3-225ENST00000508387 CHKAP35790 457 aa13.37□□□□□ -0.27
NR1I3-225ENST00000508387 PITX1P78337 314 aaPredicted RBP13.37□□□□□ -0.27
NR1I3-225ENST00000508387 FOXK2Q01167 660 aa13.37□□□□□ -0.27
NR1I3-225ENST00000508387 PREPLQ4J6C6 727 aaPredicted RBP13.37□□□□□ -0.27
NR1I3-225ENST00000508387 FAM133BQ5BKY9 247 aaKnown RBP13.37□□□□□ -0.27
NR1I3-225ENST00000508387 PPM1JQ5JR12 505 aa13.37□□□□□ -0.27
NR1I3-225ENST00000508387 STPG1Q5TH74 334 aa13.37□□□□□ -0.27
NR1I3-225ENST00000508387 NADSYN1Q6IA69 706 aa13.37□□□□□ -0.27
NR1I3-225ENST00000508387 TRMT11Q7Z4G4 463 aaKnown RBP13.37□□□□□ -0.27
NR1I3-225ENST00000508387 SCUBE3Q8IX30 993 aa13.37□□□□□ -0.27
NR1I3-225ENST00000508387 KCNV2Q8TDN2 545 aa13.37□□□□□ -0.27
NR1I3-225ENST00000508387 DQX1Q8TE96 717 aaKnown RBP13.37□□□□□ -0.27
NR1I3-225ENST00000508387 PIGKQ92643 395 aa13.37□□□□□ -0.27
NR1I3-225ENST00000508387 SPACA7Q96KW9 195 aa13.37□□□□□ -0.27
NR1I3-225ENST00000508387 PRICKLE1Q96MT3 831 aaPredicted RBP13.37□□□□□ -0.27
NR1I3-225ENST00000508387 XPO7Q9UIA9 1087 aaKnown RBP13.37□□□□□ -0.27
NR1I3-225ENST00000508387 SLC27A6Q9Y2P4 619 aa13.37□□□□□ -0.27
NR1I3-225ENST00000508387 HBS1LQ9Y450 684 aaKnown RBP13.37□□□□□ -0.27
NR1I3-225ENST00000508387 STON1Q9Y6Q2 735 aa13.37□□□□□ -0.27
NR1I3-225ENST00000508387 IGHV1OR15-9A0A0B4J2B8 117 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms