RNA–Protein interactions for RNA: ENST00000508274.5

RAB28-205, Transcript of RAB28, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB28, Length 1,551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-205ENST00000508274 CNGB3Q9NQW8 809 aa14.94□□□□□ -0.02
RAB28-205ENST00000508274 FBXO10Q9UK96 956 aa14.94□□□□□ -0.02
RAB28-205ENST00000508274 CLEC4EQ9ULY5 219 aa14.94□□□□□ -0.02
RAB28-205ENST00000508274 ZNF510Q9Y2H8 683 aa14.94□□□□□ -0.02
RAB28-205ENST00000508274 RAD54BQ9Y620 910 aa14.94□□□□□ -0.02
RAB28-205ENST00000508274 BCLAF3A2AJT9 711 aaKnown RBP14.93□□□□□ -0.02
RAB28-205ENST00000508274 WASH3PC4AMC7 463 aa14.93□□□□□ -0.02
RAB28-205ENST00000508274 GABRG2P18507 467 aa14.93□□□□□ -0.02
RAB28-205ENST00000508274 CHKAP35790 457 aa14.93□□□□□ -0.02
RAB28-205ENST00000508274 TRIP4Q15650 581 aaPredicted RBP14.93□□□□□ -0.02
RAB28-205ENST00000508274 GEN1Q17RS7 908 aa14.93□□□□□ -0.02
RAB28-205ENST00000508274 CREBRFQ8IUR6 639 aa14.93□□□□□ -0.02
RAB28-205ENST00000508274 RNF139Q8WU17 664 aa14.93□□□□□ -0.02
RAB28-205ENST00000508274 PLD4Q96BZ4 506 aa14.93□□□□□ -0.02
RAB28-205ENST00000508274 CRACR2AQ9BSW2 395 aa14.93□□□□□ -0.02
RAB28-205ENST00000508274 CD248Q9HCU0 757 aa14.93□□□□□ -0.02
RAB28-205ENST00000508274 VPS45Q9NRW7 570 aa14.93□□□□□ -0.02
RAB28-205ENST00000508274 OLA1Q9NTK5 396 aaKnown RBP14.93□□□□□ -0.02
RAB28-205ENST00000508274 CACNA2D2Q9NY47 1150 aa14.93□□□□□ -0.02
RAB28-205ENST00000508274 MBD1Q9UIS9 605 aaPredicted RBP14.93□□□□□ -0.02
RAB28-205ENST00000508274 RWDD2AQ9UIY3 292 aa14.93□□□□□ -0.02
RAB28-205ENST00000508274 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa14.92□□□□□ -0.02
RAB28-205ENST00000508274 CAVIN2O95810 425 aa14.92□□□□□ -0.02
RAB28-205ENST00000508274 KRT5P13647 590 aa14.92□□□□□ -0.02
RAB28-205ENST00000508274 DHPSP49366 369 aaPredicted RBP14.92□□□□□ -0.02
RAB28-205ENST00000508274 MFAP3P55082 362 aa14.92□□□□□ -0.02
RAB28-205ENST00000508274 APBA1Q02410 837 aa14.92□□□□□ -0.02
RAB28-205ENST00000508274 MAP7D1Q3KQU3 841 aa14.92□□□□□ -0.02
RAB28-205ENST00000508274 GJB7Q6PEY0 223 aa14.92□□□□□ -0.02
RAB28-205ENST00000508274 FAM217AQ8IXS0 508 aa14.92□□□□□ -0.02
RAB28-205ENST00000508274 TMEFF1Q8IYR6 380 aa14.92□□□□□ -0.02
RAB28-205ENST00000508274 SCML4Q8N228 414 aa14.92□□□□□ -0.02
RAB28-205ENST00000508274 CPXM2Q8N436 756 aa14.92□□□□□ -0.02
RAB28-205ENST00000508274 SLC6A17Q9H1V8 727 aa14.92□□□□□ -0.02
RAB28-205ENST00000508274 UBE2TQ9NPD8 197 aaPredicted RBP14.92□□□□□ -0.02
RAB28-205ENST00000508274 ACP6Q9NPH0 428 aa14.92□□□□□ -0.02
RAB28-205ENST00000508274 CD93Q9NPY3 652 aa14.92□□□□□ -0.02
RAB28-205ENST00000508274 CALCOCO1Q9P1Z2 691 aa14.92□□□□□ -0.02
RAB28-205ENST00000508274 CNOT1A5YKK6 2376 aaKnown RBP14.92□□□□□ -0.02
RAB28-205ENST00000508274 PATE3B3GLJ2 98 aa14.91□□□□□ -0.02
RAB28-205ENST00000508274 FOXD2O60548 495 aaPredicted RBP14.91□□□□□ -0.02
RAB28-205ENST00000508274 NDUFV2P19404 249 aa14.91□□□□□ -0.02
RAB28-205ENST00000508274 PI4KAP42356 2102 aa14.91□□□□□ -0.02
RAB28-205ENST00000508274 ARMCX6Q7L4S7 300 aa14.91□□□□□ -0.02
RAB28-205ENST00000508274 CYP2U1Q7Z449 544 aa14.91□□□□□ -0.02
RAB28-205ENST00000508274 C11orf74Q86VG3 221 aa14.91□□□□□ -0.02
RAB28-205ENST00000508274 IRF2BP1Q8IU81 584 aa14.91□□□□□ -0.02
RAB28-205ENST00000508274 IPO4Q8TEX9 1081 aaKnown RBP14.91□□□□□ -0.02
RAB28-205ENST00000508274 SPACA7Q96KW9 195 aa14.91□□□□□ -0.02
RAB28-205ENST00000508274 GABRG3Q99928 467 aa14.91□□□□□ -0.02
RAB28-205ENST00000508274 MIS12Q9H081 205 aa14.91□□□□□ -0.02
RAB28-205ENST00000508274 ABCC13Q9NSE7 274 aa14.91□□□□□ -0.02
RAB28-205ENST00000508274 CNTN6Q9UQ52 1028 aa14.91□□□□□ -0.02
RAB28-205ENST00000508274 SLC27A6Q9Y2P4 619 aa14.91□□□□□ -0.02
RAB28-205ENST00000508274 CKAP5Q14008 2032 aa14.9□□□□□ -0.02
RAB28-205ENST00000508274 TSPAN3O60637 253 aa14.9□□□□□ -0.02
RAB28-205ENST00000508274 FGFR1OPO95684 399 aaKnown RBP14.9□□□□□ -0.02
RAB28-205ENST00000508274 CYBBP04839 570 aa14.9□□□□□ -0.02
RAB28-205ENST00000508274 SLC9A1P19634 815 aa14.9□□□□□ -0.02
RAB28-205ENST00000508274 PTGER3P43115 390 aa14.9□□□□□ -0.02
RAB28-205ENST00000508274 GPD2P43304 727 aa14.9□□□□□ -0.02
RAB28-205ENST00000508274 HARS2P49590 506 aaKnown RBP14.9□□□□□ -0.02
RAB28-205ENST00000508274 STILQ15468 1287 aa14.9□□□□□ -0.02
RAB28-205ENST00000508274 MSANTD2Q6P1R3 559 aa14.9□□□□□ -0.02
RAB28-205ENST00000508274 TRIM65Q6PJ69 517 aa14.9□□□□□ -0.02
RAB28-205ENST00000508274 DDI1Q8WTU0 396 aa14.9□□□□□ -0.02
RAB28-205ENST00000508274 PIWIL1Q96J94 861 aaKnown RBP14.9□□□□□ -0.02
RAB28-205ENST00000508274 HBS1LQ9Y450 684 aaKnown RBP14.9□□□□□ -0.02
RAB28-205ENST00000508274 LNP1A1A4G5 178 aa14.9□□□□□ -0.02
RAB28-205ENST00000508274 LTFP02788 710 aa14.9□□□□□ -0.02
RAB28-205ENST00000508274 HOXD9P28356 352 aaPredicted RBP14.9□□□□□ -0.02
RAB28-205ENST00000508274 SGSHP51688 502 aa14.9□□□□□ -0.02
RAB28-205ENST00000508274 LIMK1P53667 647 aa14.9□□□□□ -0.02
RAB28-205ENST00000508274 PPM1JQ5JR12 505 aa14.9□□□□□ -0.02
RAB28-205ENST00000508274 STPG1Q5TH74 334 aa14.9□□□□□ -0.02
RAB28-205ENST00000508274 SDE2Q6IQ49 451 aa14.9□□□□□ -0.02
RAB28-205ENST00000508274 DENND1BQ6P3S1 775 aa14.9□□□□□ -0.02
RAB28-205ENST00000508274 SORCS1Q8WY21 1168 aa14.9□□□□□ -0.02
RAB28-205ENST00000508274 IRGQQ8WZA9 623 aa14.9□□□□□ -0.02
RAB28-205ENST00000508274 PIGKQ92643 395 aa14.9□□□□□ -0.02
RAB28-205ENST00000508274 HSFY1Q96LI6 401 aa14.9□□□□□ -0.02
RAB28-205ENST00000508274 EDEM2Q9BV94 578 aa14.9□□□□□ -0.02
RAB28-205ENST00000508274 CLSTN2Q9H4D0 955 aa14.9□□□□□ -0.02
RAB28-205ENST00000508274 CYTH4Q9UIA0 394 aa14.9□□□□□ -0.02
RAB28-205ENST00000508274 STON1Q9Y6Q2 735 aa14.9□□□□□ -0.02
RAB28-205ENST00000508274 ATXN2Q99700 1313 aaKnown RBP14.89□□□□□ -0.03
RAB28-205ENST00000508274 MUC22E2RYF6 1773 aaPredicted RBP14.89□□□□□ -0.03
RAB28-205ENST00000508274 BECN2A8MW95 431 aa14.89□□□□□ -0.03
RAB28-205ENST00000508274 GFRA2O00451 464 aa14.89□□□□□ -0.03
RAB28-205ENST00000508274 MAP3K13O43283 966 aa14.89□□□□□ -0.03
RAB28-205ENST00000508274 LETM1O95202 739 aaPredicted RBP14.89□□□□□ -0.03
RAB28-205ENST00000508274 FYNP06241 537 aa14.89□□□□□ -0.03
RAB28-205ENST00000508274 IL12RB1P42701 662 aa14.89□□□□□ -0.03
RAB28-205ENST00000508274 DPCR1Q3MIW9 517 aa14.89□□□□□ -0.03
RAB28-205ENST00000508274 TMEM215Q68D42 235 aa14.89□□□□□ -0.03
RAB28-205ENST00000508274 LPCAT2Q7L5N7 544 aa14.89□□□□□ -0.03
RAB28-205ENST00000508274 ANKS1BQ7Z6G8 1248 aa14.89□□□□□ -0.03
RAB28-205ENST00000508274 SCUBE3Q8IX30 993 aa14.89□□□□□ -0.03
RAB28-205ENST00000508274 DEFB119Q8N690 84 aa14.89□□□□□ -0.03
RAB28-205ENST00000508274 ST7Q9NRC1 585 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms