RNA–Protein interactions for RNA: ENST00000507823.5

SFXN1-208, Transcript of sideroflexin 1, humanhuman

TSL 2

Gene SFXN1, Length 2,611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-208ENST00000507823 E7ENQ6 273 aa18.28■□□□□ 0.52
SFXN1-208ENST00000507823 POC1B-GALNT4F8VUJ3 575 aa18.28■□□□□ 0.52
SFXN1-208ENST00000507823 ZNF189O75820 626 aaPredicted RBP18.28■□□□□ 0.52
SFXN1-208ENST00000507823 C1QAP02745 245 aa18.28■□□□□ 0.52
SFXN1-208ENST00000507823 ATP2A2P16615 1042 aaKnown RBP18.28■□□□□ 0.52
SFXN1-208ENST00000507823 ELK3P41970 407 aa18.28■□□□□ 0.52
SFXN1-208ENST00000507823 HCAR3P49019 387 aa18.28■□□□□ 0.52
SFXN1-208ENST00000507823 ACLYP53396 1101 aa18.28■□□□□ 0.52
SFXN1-208ENST00000507823 BEND5Q7L4P6 421 aa18.28■□□□□ 0.52
SFXN1-208ENST00000507823 RNF180Q86T96 592 aa18.28■□□□□ 0.52
SFXN1-208ENST00000507823 CAND1Q86VP6 1230 aaKnown RBP18.28■□□□□ 0.52
SFXN1-208ENST00000507823 PALM2Q8IXS6 379 aa18.28■□□□□ 0.52
SFXN1-208ENST00000507823 CACNA2D3Q8IZS8 1091 aa18.28■□□□□ 0.52
SFXN1-208ENST00000507823 RNF169Q8NCN4 708 aa18.28■□□□□ 0.52
SFXN1-208ENST00000507823 FBF1Q8TES7 1133 aa18.28■□□□□ 0.52
SFXN1-208ENST00000507823 ETNK1Q9HBU6 452 aa18.28■□□□□ 0.52
SFXN1-208ENST00000507823 TRMT13Q9NUP7 481 aaKnown RBP18.28■□□□□ 0.52
SFXN1-208ENST00000507823 SMG5Q9UPR3 1016 aaKnown RBP18.28■□□□□ 0.52
SFXN1-208ENST00000507823 TYMPP19971 482 aa18.28■□□□□ 0.52
SFXN1-208ENST00000507823 DEUP1Q05D60 604 aa18.28■□□□□ 0.52
SFXN1-208ENST00000507823 SEMA5AQ13591 1074 aa18.28■□□□□ 0.52
SFXN1-208ENST00000507823 PRKD1Q15139 912 aaPredicted RBP18.28■□□□□ 0.52
SFXN1-208ENST00000507823 PKN2Q16513 984 aaKnown RBP18.28■□□□□ 0.52
SFXN1-208ENST00000507823 MYLPFQ96A32 169 aa18.28■□□□□ 0.52
SFXN1-208ENST00000507823 SUSD3Q96L08 255 aa18.28■□□□□ 0.52
SFXN1-208ENST00000507823 KCNK16Q96T55 309 aa18.28■□□□□ 0.52
SFXN1-208ENST00000507823 KCNK9Q9NPC2 374 aa18.28■□□□□ 0.52
SFXN1-208ENST00000507823 GSTA2P09210 222 aa18.27■□□□□ 0.52
SFXN1-208ENST00000507823 ADRA1BP35368 520 aa18.27■□□□□ 0.52
SFXN1-208ENST00000507823 DCLRE1AQ6PJP8 1040 aa18.27■□□□□ 0.52
SFXN1-208ENST00000507823 METTL23Q86XA0 190 aa18.27■□□□□ 0.52
SFXN1-208ENST00000507823 TAB3Q8N5C8 712 aaPredicted RBP18.27■□□□□ 0.52
SFXN1-208ENST00000507823 SLC43A3Q8NBI5 491 aa18.27■□□□□ 0.52
SFXN1-208ENST00000507823 CCDC110Q8TBZ0 833 aa18.27■□□□□ 0.52
SFXN1-208ENST00000507823 DCAKDQ8WVC6 231 aa18.27■□□□□ 0.52
SFXN1-208ENST00000507823 RSPH1Q8WYR4 309 aa18.27■□□□□ 0.52
SFXN1-208ENST00000507823 TRABDQ9H4I3 376 aa18.27■□□□□ 0.52
SFXN1-208ENST00000507823 RGS18Q9NS28 235 aa18.27■□□□□ 0.52
SFXN1-208ENST00000507823 RAD54BQ9Y620 910 aa18.27■□□□□ 0.52
SFXN1-208ENST00000507823 ARHGEF37A1IGU5 675 aa18.27■□□□□ 0.51
SFXN1-208ENST00000507823 MOXD2PA6NHM9 499 aa18.27■□□□□ 0.51
SFXN1-208ENST00000507823 DCLK1O15075 740 aa18.27■□□□□ 0.51
SFXN1-208ENST00000507823 FAM155BO75949 473 aa18.27■□□□□ 0.51
SFXN1-208ENST00000507823 POMCP01189 267 aa18.27■□□□□ 0.51
SFXN1-208ENST00000507823 LTFP02788 710 aa18.27■□□□□ 0.51
SFXN1-208ENST00000507823 GLUD2P49448 558 aa18.27■□□□□ 0.51
SFXN1-208ENST00000507823 ITIH4Q14624 930 aa18.27■□□□□ 0.51
SFXN1-208ENST00000507823 ZNF534Q76KX8 674 aa18.27■□□□□ 0.51
SFXN1-208ENST00000507823 TFB1MQ8WVM0 346 aaKnown RBP18.27■□□□□ 0.51
SFXN1-208ENST00000507823 MAGEB18Q96M61 343 aa18.27■□□□□ 0.51
SFXN1-208ENST00000507823 CYTH2Q99418 400 aa18.27■□□□□ 0.51
SFXN1-208ENST00000507823 PAFAH2Q99487 392 aa18.27■□□□□ 0.51
SFXN1-208ENST00000507823 TSEN34Q9BSV6 310 aaKnown RBP18.27■□□□□ 0.51
SFXN1-208ENST00000507823 NKIRAS1Q9NYS0 192 aa18.27■□□□□ 0.51
SFXN1-208ENST00000507823 FBXW11Q9UKB1 542 aa18.27■□□□□ 0.51
SFXN1-208ENST00000507823 CHMP2BQ9UQN3 213 aa18.27■□□□□ 0.51
SFXN1-208ENST00000507823 MFHAS1Q9Y4C4 1052 aa18.27■□□□□ 0.51
SFXN1-208ENST00000507823 TYROBPO43914 113 aa18.26■□□□□ 0.51
SFXN1-208ENST00000507823 B3GAT3O94766 335 aa18.26■□□□□ 0.51
SFXN1-208ENST00000507823 METTL18O95568 372 aa18.26■□□□□ 0.51
SFXN1-208ENST00000507823 ASMTLO95671 621 aa18.26■□□□□ 0.51
SFXN1-208ENST00000507823 OAS1P00973 400 aaKnown RBP18.26■□□□□ 0.51
SFXN1-208ENST00000507823 VAV1P15498 845 aa18.26■□□□□ 0.51
SFXN1-208ENST00000507823 ZNF135P52742 658 aaPredicted RBP18.26■□□□□ 0.51
SFXN1-208ENST00000507823 VPS52Q8N1B4 723 aa18.26■□□□□ 0.51
SFXN1-208ENST00000507823 HTR3CQ8WXA8 447 aa18.26■□□□□ 0.51
SFXN1-208ENST00000507823 NSRP1Q9H0G5 558 aaKnown RBP18.26■□□□□ 0.51
SFXN1-208ENST00000507823 ZNF638Q14966 1978 aaKnown RBP18.26■□□□□ 0.51
SFXN1-208ENST00000507823 KIF3CO14782 793 aa18.26■□□□□ 0.51
SFXN1-208ENST00000507823 MFSD11O43934 449 aa18.26■□□□□ 0.51
SFXN1-208ENST00000507823 MAP3K6O95382 1288 aa18.26■□□□□ 0.51
SFXN1-208ENST00000507823 IFNAR2P48551 515 aa18.26■□□□□ 0.51
SFXN1-208ENST00000507823 WDR4P57081 412 aaKnown RBP18.26■□□□□ 0.51
SFXN1-208ENST00000507823 FAM189BP81408 668 aa18.26■□□□□ 0.51
SFXN1-208ENST00000507823 RGS9BPQ6ZS82 235 aa18.26■□□□□ 0.51
SFXN1-208ENST00000507823 CAPN12Q6ZSI9 719 aa18.26■□□□□ 0.51
SFXN1-208ENST00000507823 PLAC1Q9HBJ0 212 aa18.26■□□□□ 0.51
SFXN1-208ENST00000507823 A0A0A0MRY4 1105 aa18.25■□□□□ 0.51
SFXN1-208ENST00000507823 TCRBV9S1A1TA0A576 114 aa18.25■□□□□ 0.51
SFXN1-208ENST00000507823 EOMESO95936 686 aa18.25■□□□□ 0.51
SFXN1-208ENST00000507823 F9P00740 461 aa18.25■□□□□ 0.51
SFXN1-208ENST00000507823 BRCC3P46736 316 aa18.25■□□□□ 0.51
SFXN1-208ENST00000507823 CDK16Q00536 496 aa18.25■□□□□ 0.51
SFXN1-208ENST00000507823 LRRC14Q15048 493 aa18.25■□□□□ 0.51
SFXN1-208ENST00000507823 MAPRE1Q15691 268 aaKnown RBP18.25■□□□□ 0.51
SFXN1-208ENST00000507823 HEATR6Q6AI08 1181 aaKnown RBP18.25■□□□□ 0.51
SFXN1-208ENST00000507823 RFX8Q6ZV50 586 aa18.25■□□□□ 0.51
SFXN1-208ENST00000507823 PXYLP1Q8TE99 480 aa18.25■□□□□ 0.51
SFXN1-208ENST00000507823 SLC44A1Q8WWI5 657 aa18.25■□□□□ 0.51
SFXN1-208ENST00000507823 SPATA13Q96N96 652 aa18.25■□□□□ 0.51
SFXN1-208ENST00000507823 KBTBD13C9JR72 458 aa18.25■□□□□ 0.51
SFXN1-208ENST00000507823 I6L893 689 aaPredicted RBP18.25■□□□□ 0.51
SFXN1-208ENST00000507823 USP17L7P0C7H9 530 aa18.25■□□□□ 0.51
SFXN1-208ENST00000507823 CKBP12277 381 aa18.25■□□□□ 0.51
SFXN1-208ENST00000507823 HOXD10P28358 340 aa18.25■□□□□ 0.51
SFXN1-208ENST00000507823 FDFT1P37268 417 aa18.25■□□□□ 0.51
SFXN1-208ENST00000507823 EFTUD2Q15029 972 aaKnown RBP eCLIP18.25■□□□□ 0.512e-8■■■■□ 24
SFXN1-208ENST00000507823 ANKRD42Q8N9B4 389 aa18.25■□□□□ 0.51
SFXN1-208ENST00000507823 CCDC197Q8NCU1 140 aa18.25■□□□□ 0.51
SFXN1-208ENST00000507823 SMC6Q96SB8 1091 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms