RNA–Protein interactions for RNA: ENST00000506515.1

HERC4-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-213ENST00000506515 HECTD2Q5U5R9 776 aa6.76□□□□□ -1.33
HERC4-213ENST00000506515 FAM90A2PQ658T7 463 aa6.76□□□□□ -1.33
HERC4-213ENST00000506515 CRIP3Q6Q6R5 217 aa6.76□□□□□ -1.33
HERC4-213ENST00000506515 TRABD2AQ86V40 505 aa6.76□□□□□ -1.33
HERC4-213ENST00000506515 PRR11Q96HE9 360 aaPredicted RBP6.76□□□□□ -1.33
HERC4-213ENST00000506515 TTPALQ9BTX7 342 aa6.76□□□□□ -1.33
HERC4-213ENST00000506515 MECRQ9BV79 373 aa6.76□□□□□ -1.33
HERC4-213ENST00000506515 KRTAP4-9Q9BYQ8 210 aa6.76□□□□□ -1.33
HERC4-213ENST00000506515 CCDC134Q9H6E4 229 aa6.76□□□□□ -1.33
HERC4-213ENST00000506515 SAP30LQ9HAJ7 183 aa6.76□□□□□ -1.33
HERC4-213ENST00000506515 FBXO28Q9NVF7 368 aa6.76□□□□□ -1.33
HERC4-213ENST00000506515 MYRFQ9Y2G1 1151 aa6.76□□□□□ -1.33
HERC4-213ENST00000506515 HS3ST3A1Q9Y663 406 aa6.76□□□□□ -1.33
HERC4-213ENST00000506515 WDR7Q9Y4E6 1490 aa6.76□□□□□ -1.33
HERC4-213ENST00000506515 H0Y3Z8 333 aa6.75□□□□□ -1.33
HERC4-213ENST00000506515 EIF3FO00303 357 aaPredicted RBP6.75□□□□□ -1.33
HERC4-213ENST00000506515 PRRG2O14669 202 aa6.75□□□□□ -1.33
HERC4-213ENST00000506515 TMPRSS11DO60235 418 aa6.75□□□□□ -1.33
HERC4-213ENST00000506515 FAM155BO75949 473 aa6.75□□□□□ -1.33
HERC4-213ENST00000506515 ZNF37AP17032 561 aaPredicted RBP6.75□□□□□ -1.33
HERC4-213ENST00000506515 FPR3P25089 353 aa6.75□□□□□ -1.33
HERC4-213ENST00000506515 ADD2P35612 726 aa6.75□□□□□ -1.33
HERC4-213ENST00000506515 BUD31P41223 144 aaPredicted RBP6.75□□□□□ -1.33
HERC4-213ENST00000506515 DIO1P49895 249 aa6.75□□□□□ -1.33
HERC4-213ENST00000506515 CCT8P50990 548 aa6.75□□□□□ -1.33
HERC4-213ENST00000506515 SF3A3Q12874 501 aaKnown RBP eCLIP6.75□□□□□ -1.33
HERC4-213ENST00000506515 TAF12Q16514 161 aa6.75□□□□□ -1.33
HERC4-213ENST00000506515 TRIM60Q495X7 471 aa6.75□□□□□ -1.33
HERC4-213ENST00000506515 PCID2Q5JVF3 399 aa6.75□□□□□ -1.33
HERC4-213ENST00000506515 LAIR1Q6GTX8 287 aa6.75□□□□□ -1.33
HERC4-213ENST00000506515 ANKRD16Q6P6B7 361 aa6.75□□□□□ -1.33
HERC4-213ENST00000506515 ULK2Q8IYT8 1036 aa6.75□□□□□ -1.33
HERC4-213ENST00000506515 DDX51Q8N8A6 666 aaKnown RBP eCLIP6.75□□□□□ -1.33
HERC4-213ENST00000506515 OR6Y1Q8NGX8 325 aa6.75□□□□□ -1.33
HERC4-213ENST00000506515 USP29Q9HBJ7 922 aa6.75□□□□□ -1.33
HERC4-213ENST00000506515 SNX15Q9NRS6 342 aa6.75□□□□□ -1.33
HERC4-213ENST00000506515 C9orf78Q9NZ63 289 aaPredicted RBP6.75□□□□□ -1.33
HERC4-213ENST00000506515 FOXJ2Q9P0K8 574 aa6.75□□□□□ -1.33
HERC4-213ENST00000506515 VPS4AQ9UN37 437 aa6.75□□□□□ -1.33
HERC4-213ENST00000506515 ADAMTS5Q9UNA0 930 aa6.75□□□□□ -1.33
HERC4-213ENST00000506515 C19orf53Q9UNZ5 99 aaPredicted RBP6.75□□□□□ -1.33
HERC4-213ENST00000506515 ARAP3Q8WWN8 1544 aa6.75□□□□□ -1.33
HERC4-213ENST00000506515 NCANO14594 1321 aa6.75□□□□□ -1.33
HERC4-213ENST00000506515 PTPRMP28827 1452 aa6.74□□□□□ -1.33
HERC4-213ENST00000506515 GOLGA3Q08378 1498 aa6.74□□□□□ -1.33
HERC4-213ENST00000506515 EFCAB8A8MWE9 144 aa6.74□□□□□ -1.33
HERC4-213ENST00000506515 M0QYT0 321 aa6.74□□□□□ -1.33
HERC4-213ENST00000506515 M0QZQ0 153 aa6.74□□□□□ -1.33
HERC4-213ENST00000506515 SUV39H1O43463 412 aa6.74□□□□□ -1.33
HERC4-213ENST00000506515 KRT38O76015 456 aa6.74□□□□□ -1.33
HERC4-213ENST00000506515 TJP3O95049 919 aa6.74□□□□□ -1.33
HERC4-213ENST00000506515 ITPKBP27987 946 aa6.74□□□□□ -1.33
HERC4-213ENST00000506515 TXNL4AP83876 142 aaKnown RBP6.74□□□□□ -1.33
HERC4-213ENST00000506515 ZNF169Q14929 603 aaPredicted RBP6.74□□□□□ -1.33
HERC4-213ENST00000506515 ZXDCQ2QGD7 858 aaPredicted RBP6.74□□□□□ -1.33
HERC4-213ENST00000506515 ZNF569Q5MCW4 686 aa6.74□□□□□ -1.33
HERC4-213ENST00000506515 TTC22Q5TAA0 569 aa6.74□□□□□ -1.33
HERC4-213ENST00000506515 DENND2CQ68D51 928 aa6.74□□□□□ -1.33
HERC4-213ENST00000506515 ANKRD40Q6AI12 368 aa6.74□□□□□ -1.33
HERC4-213ENST00000506515 KIRREL2Q6UWL6 708 aa6.74□□□□□ -1.33
HERC4-213ENST00000506515 CYP26C1Q6V0L0 522 aa6.74□□□□□ -1.33
HERC4-213ENST00000506515 C2CD5Q86YS7 1000 aa6.74□□□□□ -1.33
HERC4-213ENST00000506515 OVCA2Q8WZ82 227 aa6.74□□□□□ -1.33
HERC4-213ENST00000506515 CPT1BQ92523 772 aa6.74□□□□□ -1.33
HERC4-213ENST00000506515 GOLGA1Q92805 767 aa6.74□□□□□ -1.33
HERC4-213ENST00000506515 REXO5Q96IC2 774 aaKnown RBP6.74□□□□□ -1.33
HERC4-213ENST00000506515 PDLIM2Q96JY6 352 aa6.74□□□□□ -1.33
HERC4-213ENST00000506515 UBXN10Q96LJ8 280 aa6.74□□□□□ -1.33
HERC4-213ENST00000506515 FSD1LQ9BXM9 530 aa6.74□□□□□ -1.33
HERC4-213ENST00000506515 FEM1BQ9UK73 627 aa6.74□□□□□ -1.33
HERC4-213ENST00000506515 NFU1Q9UMS0 254 aa6.74□□□□□ -1.33
HERC4-213ENST00000506515 PPRC1Q5VV67 1664 aaKnown RBP6.74□□□□□ -1.33
HERC4-213ENST00000506515 TMEM191CA6NGB0 347 aa6.73□□□□□ -1.33
HERC4-213ENST00000506515 MYCLP12524 364 aaPredicted RBP6.73□□□□□ -1.33
HERC4-213ENST00000506515 PEPDP12955 493 aa6.73□□□□□ -1.33
HERC4-213ENST00000506515 TNFRSF1AP19438 455 aa6.73□□□□□ -1.33
HERC4-213ENST00000506515 SERPINA4P29622 427 aa6.73□□□□□ -1.33
HERC4-213ENST00000506515 THBS4P35443 961 aa6.73□□□□□ -1.33
HERC4-213ENST00000506515 AARSP49588 968 aaKnown RBP eCLIP6.73□□□□□ -1.33
HERC4-213ENST00000506515 RNASELQ05823 741 aaKnown RBP6.73□□□□□ -1.33
HERC4-213ENST00000506515 LMAN2Q12907 356 aa6.73□□□□□ -1.33
HERC4-213ENST00000506515 DNASE1L3Q13609 305 aa6.73□□□□□ -1.33
HERC4-213ENST00000506515 FAM153CQ494X1 144 aa6.73□□□□□ -1.33
HERC4-213ENST00000506515 GALNTL6Q49A17 601 aa6.73□□□□□ -1.33
HERC4-213ENST00000506515 FBXO47Q5MNV8 452 aa6.73□□□□□ -1.33
HERC4-213ENST00000506515 NAPRTQ6XQN6 538 aa6.73□□□□□ -1.33
HERC4-213ENST00000506515 RASAL3Q86YV0 1011 aa6.73□□□□□ -1.33
HERC4-213ENST00000506515 PNPLA1Q8N8W4 532 aa6.73□□□□□ -1.33
HERC4-213ENST00000506515 FAM71DQ8N9W8 422 aa6.73□□□□□ -1.33
HERC4-213ENST00000506515 SPPL3Q8TCT6 385 aa6.73□□□□□ -1.33
HERC4-213ENST00000506515 THAP4Q8WY91 577 aa6.73□□□□□ -1.33
HERC4-213ENST00000506515 PAAF1Q9BRP4 392 aa6.73□□□□□ -1.33
HERC4-213ENST00000506515 VPS45Q9NRW7 570 aa6.73□□□□□ -1.33
HERC4-213ENST00000506515 CFAP43Q8NDM7 1665 aa6.73□□□□□ -1.33
HERC4-213ENST00000506515 IQGAP2Q13576 1575 aa6.73□□□□□ -1.33
HERC4-213ENST00000506515 CCDC187A0A096LP49 1063 aa6.72□□□□□ -1.33
HERC4-213ENST00000506515 GXYLT2A0PJZ3 443 aa6.72□□□□□ -1.33
HERC4-213ENST00000506515 E7EVH7 732 aa6.72□□□□□ -1.33
HERC4-213ENST00000506515 LARGE1O95461 756 aa6.72□□□□□ -1.33
HERC4-213ENST00000506515 PYGLP06737 847 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms