RNA–Protein interactions for RNA: ENST00000506426.1

TRAPPC11-205, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-205ENST00000506426 SEMA3BQ13214 749 aa3.61□□□□□ -1.83
TRAPPC11-205ENST00000506426 KCTD2Q14681 263 aa3.61□□□□□ -1.83
TRAPPC11-205ENST00000506426 NFIXQ14938 502 aa3.61□□□□□ -1.83
TRAPPC11-205ENST00000506426 ST3GAL2Q16842 350 aa3.61□□□□□ -1.83
TRAPPC11-205ENST00000506426 RABL3Q5HYI8 236 aa3.61□□□□□ -1.83
TRAPPC11-205ENST00000506426 CCDC144NLQ6NUI1 221 aa3.61□□□□□ -1.83
TRAPPC11-205ENST00000506426 PIK3AP1Q6ZUJ8 805 aa3.61□□□□□ -1.83
TRAPPC11-205ENST00000506426 RASGRP2Q7LDG7 609 aa3.61□□□□□ -1.83
TRAPPC11-205ENST00000506426 KRT27Q7Z3Y8 459 aa3.61□□□□□ -1.83
TRAPPC11-205ENST00000506426 CAND1Q86VP6 1230 aaKnown RBP3.61□□□□□ -1.83
TRAPPC11-205ENST00000506426 AFAP1Q8N556 730 aa3.61□□□□□ -1.83
TRAPPC11-205ENST00000506426 CCDC89Q8N998 374 aa3.61□□□□□ -1.83
TRAPPC11-205ENST00000506426 FSIP1Q8NA03 581 aa3.61□□□□□ -1.83
TRAPPC11-205ENST00000506426 SLC22A17Q8WUG5 538 aa3.61□□□□□ -1.83
TRAPPC11-205ENST00000506426 UCMAQ8WVF2 138 aa3.61□□□□□ -1.83
TRAPPC11-205ENST00000506426 EDAQ92838 391 aa3.61□□□□□ -1.83
TRAPPC11-205ENST00000506426 RSPRY1Q96DX4 576 aa3.61□□□□□ -1.83
TRAPPC11-205ENST00000506426 VPS50Q96JG6 964 aa3.61□□□□□ -1.83
TRAPPC11-205ENST00000506426 NEUROD6Q96NK8 337 aa3.61□□□□□ -1.83
TRAPPC11-205ENST00000506426 MECRQ9BV79 373 aa3.61□□□□□ -1.83
TRAPPC11-205ENST00000506426 DPCDQ9BVM2 203 aaPredicted RBP3.61□□□□□ -1.83
TRAPPC11-205ENST00000506426 ABHD16BQ9H3Z7 469 aa3.61□□□□□ -1.83
TRAPPC11-205ENST00000506426 AKIP1Q9NQ31 210 aa3.61□□□□□ -1.83
TRAPPC11-205ENST00000506426 RXFP3Q9NSD7 469 aa3.61□□□□□ -1.83
TRAPPC11-205ENST00000506426 BLOC1S4Q9NUP1 217 aa3.61□□□□□ -1.83
TRAPPC11-205ENST00000506426 FBXO28Q9NVF7 368 aa3.61□□□□□ -1.83
TRAPPC11-205ENST00000506426 AASSQ9UDR5 926 aa3.61□□□□□ -1.83
TRAPPC11-205ENST00000506426 TBX20Q9UMR3 447 aa3.61□□□□□ -1.83
TRAPPC11-205ENST00000506426 ZBTB1Q9Y2K1 713 aa3.61□□□□□ -1.83
TRAPPC11-205ENST00000506426 AFG3L2Q9Y4W6 797 aa3.61□□□□□ -1.83
TRAPPC11-205ENST00000506426 ABCA6Q8N139 1617 aa3.61□□□□□ -1.83
TRAPPC11-205ENST00000506426 TROQ12816 1431 aaPredicted RBP3.61□□□□□ -1.83
TRAPPC11-205ENST00000506426 FMN1Q68DA7 1419 aa3.61□□□□□ -1.83
TRAPPC11-205ENST00000506426 TRAPPC8Q9Y2L5 1435 aa3.61□□□□□ -1.83
TRAPPC11-205ENST00000506426 ZNF518AQ6AHZ1 1483 aa3.6□□□□□ -1.83
TRAPPC11-205ENST00000506426 KDM5CP41229 1560 aa3.6□□□□□ -1.83
TRAPPC11-205ENST00000506426 A0A087X0M5 115 aa3.6□□□□□ -1.83
TRAPPC11-205ENST00000506426 A0A1B0GX30 115 aa3.6□□□□□ -1.83
TRAPPC11-205ENST00000506426 GXYLT2A0PJZ3 443 aa3.6□□□□□ -1.83
TRAPPC11-205ENST00000506426 A1L4Q6 167 aa3.6□□□□□ -1.83
TRAPPC11-205ENST00000506426 VWA3AA6NCI4 1184 aa3.6□□□□□ -1.83
TRAPPC11-205ENST00000506426 FAM90A20PA6NIJ5 464 aa3.6□□□□□ -1.83
TRAPPC11-205ENST00000506426 MARCH11A6NNE9 402 aa3.6□□□□□ -1.83
TRAPPC11-205ENST00000506426 SLC38A8A6NNN8 435 aa3.6□□□□□ -1.83
TRAPPC11-205ENST00000506426 PRSS47A8MTI9 375 aa3.6□□□□□ -1.83
TRAPPC11-205ENST00000506426 A8MVJ9 347 aa3.6□□□□□ -1.83
TRAPPC11-205ENST00000506426 F5H0A9 414 aaPredicted RBP3.6□□□□□ -1.83
TRAPPC11-205ENST00000506426 STX16-NPEPL1H3BU86 382 aa3.6□□□□□ -1.83
TRAPPC11-205ENST00000506426 STX16O14662 325 aa3.6□□□□□ -1.83
TRAPPC11-205ENST00000506426 NCR1O76036 304 aa3.6□□□□□ -1.83
TRAPPC11-205ENST00000506426 CDKL5O76039 1030 aa3.6□□□□□ -1.83
TRAPPC11-205ENST00000506426 NDUFA10O95299 355 aa3.6□□□□□ -1.83
TRAPPC11-205ENST00000506426 HNRNPA1P09651 372 aaKnown RBP eCLIP3.6□□□□□ -1.83
TRAPPC11-205ENST00000506426 CPA1P15085 419 aa3.6□□□□□ -1.83
TRAPPC11-205ENST00000506426 DDX6P26196 483 aaKnown RBP eCLIP3.6□□□□□ -1.83
TRAPPC11-205ENST00000506426 PGM1P36871 562 aa3.6□□□□□ -1.83
TRAPPC11-205ENST00000506426 BMPR1AP36894 532 aa3.6□□□□□ -1.83
TRAPPC11-205ENST00000506426 LIPAP38571 399 aa3.6□□□□□ -1.83
TRAPPC11-205ENST00000506426 NAP1L1P55209 391 aaKnown RBP3.6□□□□□ -1.83
TRAPPC11-205ENST00000506426 NXPH1P58417 271 aa3.6□□□□□ -1.83
TRAPPC11-205ENST00000506426 RBM6P78332 1123 aaKnown RBP3.6□□□□□ -1.83
TRAPPC11-205ENST00000506426 ITIH3Q06033 890 aa3.6□□□□□ -1.83
TRAPPC11-205ENST00000506426 MTAPQ13126 283 aa3.6□□□□□ -1.83
TRAPPC11-205ENST00000506426 PDCLQ13371 301 aa3.6□□□□□ -1.83
TRAPPC11-205ENST00000506426 KCNJ12Q14500 433 aa3.6□□□□□ -1.83
TRAPPC11-205ENST00000506426 WDR45BQ5MNZ6 344 aa3.6□□□□□ -1.83
TRAPPC11-205ENST00000506426 TEDDM1Q5T9Z0 273 aa3.6□□□□□ -1.83
TRAPPC11-205ENST00000506426 CCDC30Q5VVM6 783 aa3.6□□□□□ -1.83
TRAPPC11-205ENST00000506426 NAA35Q5VZE5 725 aa3.6□□□□□ -1.83
TRAPPC11-205ENST00000506426 ANO7Q6IWH7 933 aa3.6□□□□□ -1.83
TRAPPC11-205ENST00000506426 ACAD10Q6JQN1 1059 aa3.6□□□□□ -1.83
TRAPPC11-205ENST00000506426 P3H2Q8IVL5 708 aa3.6□□□□□ -1.83
TRAPPC11-205ENST00000506426 METTL25Q8N6Q8 603 aa3.6□□□□□ -1.83
TRAPPC11-205ENST00000506426 ANKRD44Q8N8A2 993 aa3.6□□□□□ -1.83
TRAPPC11-205ENST00000506426 NGDNQ8NEJ9 315 aaKnown RBP3.6□□□□□ -1.83
TRAPPC11-205ENST00000506426 SUPT20HQ8NEM7 779 aa3.6□□□□□ -1.83
TRAPPC11-205ENST00000506426 SOCS4Q8WXH5 440 aa3.6□□□□□ -1.83
TRAPPC11-205ENST00000506426 CENPIQ92674 756 aaPredicted RBP3.6□□□□□ -1.83
TRAPPC11-205ENST00000506426 GLG1Q92896 1179 aa3.6□□□□□ -1.83
TRAPPC11-205ENST00000506426 ZUFSPQ96AP4 578 aa3.6□□□□□ -1.83
TRAPPC11-205ENST00000506426 KTI12Q96EK9 354 aaPredicted RBP3.6□□□□□ -1.83
TRAPPC11-205ENST00000506426 MCRS1Q96EZ8 462 aa3.6□□□□□ -1.83
TRAPPC11-205ENST00000506426 FAR2Q96K12 515 aa3.6□□□□□ -1.83
TRAPPC11-205ENST00000506426 C7orf26Q96N11 449 aa3.6□□□□□ -1.83
TRAPPC11-205ENST00000506426 SSBP3Q9BWW4 388 aaPredicted RBP3.6□□□□□ -1.83
TRAPPC11-205ENST00000506426 PLEKHA5Q9HAU0 1116 aa3.6□□□□□ -1.83
TRAPPC11-205ENST00000506426 AURKAIP1Q9NWT8 199 aaPredicted RBP3.6□□□□□ -1.83
TRAPPC11-205ENST00000506426 UBE2J1Q9Y385 318 aaPredicted RBP3.6□□□□□ -1.83
TRAPPC11-205ENST00000506426 RABGAP1Q9Y3P9 1069 aa3.6□□□□□ -1.83
TRAPPC11-205ENST00000506426 LAS1LQ9Y4W2 734 aaKnown RBP3.6□□□□□ -1.83
TRAPPC11-205ENST00000506426 PCDHB7Q9Y5E2 793 aa3.6□□□□□ -1.83
TRAPPC11-205ENST00000506426 CLIP1P30622 1438 aa3.6□□□□□ -1.83
TRAPPC11-205ENST00000506426 ATP10AO60312 1499 aa3.6□□□□□ -1.83
TRAPPC11-205ENST00000506426 MAGI2Q86UL8 1455 aa3.6□□□□□ -1.83
TRAPPC11-205ENST00000506426 ABCC1P33527 1531 aa3.6□□□□□ -1.83
TRAPPC11-205ENST00000506426 TBC1D3DA0A087WVF3 549 aa3.59□□□□□ -1.83
TRAPPC11-205ENST00000506426 TBC1D3IA0A087WXS9 549 aa3.59□□□□□ -1.83
TRAPPC11-205ENST00000506426 TBC1D3EA0A087X179 549 aa3.59□□□□□ -1.83
TRAPPC11-205ENST00000506426 TBC1D3KA0A087X1G2 549 aa3.59□□□□□ -1.83
TRAPPC11-205ENST00000506426 LOC105369274A0A096LPK9 316 aa3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms