RNA–Protein interactions for RNA: ENST00000506368.5

SCLT1-208, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-208ENST00000506368 MLH1P40692 756 aa16.39■□□□□ 0.21
SCLT1-208ENST00000506368 MAGEA10P43363 369 aaPredicted RBP16.39■□□□□ 0.21
SCLT1-208ENST00000506368 NPTX2P47972 431 aa16.39■□□□□ 0.21
SCLT1-208ENST00000506368 IDH3AP50213 366 aa16.39■□□□□ 0.21
SCLT1-208ENST00000506368 ZNF132P52740 706 aa16.39■□□□□ 0.21
SCLT1-208ENST00000506368 TXNL4AP83876 142 aaKnown RBP16.39■□□□□ 0.21
SCLT1-208ENST00000506368 ROR1Q01973 937 aa16.39■□□□□ 0.21
SCLT1-208ENST00000506368 PLOD1Q02809 727 aaPredicted RBP16.39■□□□□ 0.21
SCLT1-208ENST00000506368 SLC25A11Q02978 314 aaKnown RBP16.39■□□□□ 0.21
SCLT1-208ENST00000506368 CES4AQ5XG92 561 aa16.39■□□□□ 0.21
SCLT1-208ENST00000506368 UNC45BQ8IWX7 931 aa16.39■□□□□ 0.21
SCLT1-208ENST00000506368 TRIML2Q8N7C3 387 aa16.39■□□□□ 0.21
SCLT1-208ENST00000506368 MCUQ8NE86 351 aa16.39■□□□□ 0.21
SCLT1-208ENST00000506368 TSPAN14Q8NG11 270 aa16.39■□□□□ 0.21
SCLT1-208ENST00000506368 TRPM4Q8TD43 1214 aa16.39■□□□□ 0.21
SCLT1-208ENST00000506368 DQX1Q8TE96 717 aaKnown RBP16.39■□□□□ 0.21
SCLT1-208ENST00000506368 ZNF606Q8WXB4 792 aa16.39■□□□□ 0.21
SCLT1-208ENST00000506368 GCOM2Q9BZD3 368 aaPredicted RBP16.39■□□□□ 0.21
SCLT1-208ENST00000506368 C20orf27Q9GZN8 174 aa16.39■□□□□ 0.21
SCLT1-208ENST00000506368 IFT122Q9HBG6 1241 aa16.39■□□□□ 0.21
SCLT1-208ENST00000506368 TBC1D22BQ9NU19 505 aa16.39■□□□□ 0.21
SCLT1-208ENST00000506368 TBC1D23Q9NUY8 699 aa16.39■□□□□ 0.21
SCLT1-208ENST00000506368 TUBA8Q9NY65 449 aaPredicted RBP16.39■□□□□ 0.21
SCLT1-208ENST00000506368 SLC9A2Q9UBY0 812 aa16.39■□□□□ 0.21
SCLT1-208ENST00000506368 DCDC2Q9UHG0 476 aa16.39■□□□□ 0.21
SCLT1-208ENST00000506368 HERC5Q9UII4 1024 aaKnown RBP16.39■□□□□ 0.21
SCLT1-208ENST00000506368 FAM159BA6NKW6 160 aa16.38■□□□□ 0.21
SCLT1-208ENST00000506368 TOM1L1O75674 476 aa16.38■□□□□ 0.21
SCLT1-208ENST00000506368 PIAS1O75925 651 aa16.38■□□□□ 0.21
SCLT1-208ENST00000506368 THRAP10827 490 aa16.38■□□□□ 0.21
SCLT1-208ENST00000506368 VARSP26640 1264 aaKnown RBP16.38■□□□□ 0.21
SCLT1-208ENST00000506368 SNAP25P60880 206 aa16.38■□□□□ 0.21
SCLT1-208ENST00000506368 FKBP1AP62942 108 aaKnown RBP16.38■□□□□ 0.21
SCLT1-208ENST00000506368 YWHAZP63104 245 aaKnown RBP16.38■□□□□ 0.21
SCLT1-208ENST00000506368 TCHHL1Q5QJ38 904 aaPredicted RBP16.38■□□□□ 0.21
SCLT1-208ENST00000506368 FAM102BQ5T8I3 360 aa16.38■□□□□ 0.21
SCLT1-208ENST00000506368 GRAMD4Q6IC98 578 aa16.38■□□□□ 0.21
SCLT1-208ENST00000506368 GSDMBQ8TAX9 411 aa16.38■□□□□ 0.21
SCLT1-208ENST00000506368 NLRP7Q8WX94 980 aa16.38■□□□□ 0.21
SCLT1-208ENST00000506368 KCNN1Q92952 543 aa16.38■□□□□ 0.21
SCLT1-208ENST00000506368 SLC35B4Q969S0 331 aa16.38■□□□□ 0.21
SCLT1-208ENST00000506368 FAF2Q96CS3 445 aa16.38■□□□□ 0.21
SCLT1-208ENST00000506368 TRIM56Q9BRZ2 755 aaKnown RBP16.38■□□□□ 0.21
SCLT1-208ENST00000506368 CYP4F11Q9HBI6 524 aa16.38■□□□□ 0.21
SCLT1-208ENST00000506368 POPDC2Q9HBU9 364 aa16.38■□□□□ 0.21
SCLT1-208ENST00000506368 HACD3Q9P035 362 aa16.38■□□□□ 0.21
SCLT1-208ENST00000506368 TMED5Q9Y3A6 229 aa16.38■□□□□ 0.21
SCLT1-208ENST00000506368 CDY2AQ9Y6F7 541 aa16.38■□□□□ 0.21
SCLT1-208ENST00000506368 CDY1Q9Y6F8 540 aa16.38■□□□□ 0.21
SCLT1-208ENST00000506368 DKC1O60832 514 aaKnown RBP eCLIP16.38■□□□□ 0.21
SCLT1-208ENST00000506368 STAM2O75886 525 aa16.38■□□□□ 0.21
SCLT1-208ENST00000506368 CALCAP01258 141 aa16.38■□□□□ 0.21
SCLT1-208ENST00000506368 PPARGP37231 505 aaPredicted RBP16.38■□□□□ 0.21
SCLT1-208ENST00000506368 HK2P52789 917 aa16.38■□□□□ 0.21
SCLT1-208ENST00000506368 OXCT1P55809 520 aa16.38■□□□□ 0.21
SCLT1-208ENST00000506368 NAB1Q13506 487 aa16.38■□□□□ 0.21
SCLT1-208ENST00000506368 FAM47CQ5HY64 1035 aa16.38■□□□□ 0.21
SCLT1-208ENST00000506368 SLC30A10Q6XR72 485 aa16.38■□□□□ 0.21
SCLT1-208ENST00000506368 POU5F2Q8N7G0 328 aa16.38■□□□□ 0.21
SCLT1-208ENST00000506368 FAM71DQ8N9W8 422 aa16.38■□□□□ 0.21
SCLT1-208ENST00000506368 TERB1Q8NA31 727 aa16.38■□□□□ 0.21
SCLT1-208ENST00000506368 TFB1MQ8WVM0 346 aaKnown RBP16.38■□□□□ 0.21
SCLT1-208ENST00000506368 RTP4Q96DX8 246 aa16.38■□□□□ 0.21
SCLT1-208ENST00000506368 CCT7Q99832 543 aa16.38■□□□□ 0.21
SCLT1-208ENST00000506368 SLX1AQ9BQ83 275 aa16.38■□□□□ 0.21
SCLT1-208ENST00000506368 OSBPL11Q9BXB4 747 aa16.38■□□□□ 0.21
SCLT1-208ENST00000506368 PALMDQ9NP74 551 aa16.38■□□□□ 0.21
SCLT1-208ENST00000506368 APPL1Q9UKG1 709 aa16.38■□□□□ 0.21
SCLT1-208ENST00000506368 WDR90Q96KV7 1748 aa16.37■□□□□ 0.21
SCLT1-208ENST00000506368 CCDC162PA2VCL2 907 aa16.37■□□□□ 0.21
SCLT1-208ENST00000506368 H3BSA7 217 aa16.37■□□□□ 0.21
SCLT1-208ENST00000506368 GPR25O00155 361 aa16.37■□□□□ 0.21
SCLT1-208ENST00000506368 CYB561D2O14569 222 aa16.37■□□□□ 0.21
SCLT1-208ENST00000506368 SUPT3HO75486 399 aa16.37■□□□□ 0.21
SCLT1-208ENST00000506368 FGF3P11487 239 aaPredicted RBP16.37■□□□□ 0.21
SCLT1-208ENST00000506368 RPS12P25398 132 aaKnown RBP16.37■□□□□ 0.21
SCLT1-208ENST00000506368 SFNP31947 248 aa16.37■□□□□ 0.21
SCLT1-208ENST00000506368 CRKP46108 304 aa16.37■□□□□ 0.21
SCLT1-208ENST00000506368 HARS2P49590 506 aaKnown RBP16.37■□□□□ 0.21
SCLT1-208ENST00000506368 JAK3P52333 1124 aa16.37■□□□□ 0.21
SCLT1-208ENST00000506368 OGDHQ02218 1023 aa16.37■□□□□ 0.21
SCLT1-208ENST00000506368 TFDP2Q14188 446 aa16.37■□□□□ 0.21
SCLT1-208ENST00000506368 FLOT2Q14254 428 aa16.37■□□□□ 0.21
SCLT1-208ENST00000506368 NOMO1Q15155 1222 aa16.37■□□□□ 0.21
SCLT1-208ENST00000506368 ABCB5Q2M3G0 1257 aa16.37■□□□□ 0.21
SCLT1-208ENST00000506368 SLC39A4Q6P5W5 647 aa16.37■□□□□ 0.21
SCLT1-208ENST00000506368 FRMD7Q6ZUT3 714 aa16.37■□□□□ 0.21
SCLT1-208ENST00000506368 LPCAT2Q7L5N7 544 aa16.37■□□□□ 0.21
SCLT1-208ENST00000506368 ZNF516Q92618 1163 aa16.37■□□□□ 0.21
SCLT1-208ENST00000506368 CFAP36Q96G28 342 aa16.37■□□□□ 0.21
SCLT1-208ENST00000506368 COX4I2Q96KJ9 171 aa16.37■□□□□ 0.21
SCLT1-208ENST00000506368 MRPL40Q9NQ50 206 aaKnown RBP16.37■□□□□ 0.21
SCLT1-208ENST00000506368 PCDHGC3Q9UN70 934 aa16.37■□□□□ 0.21
SCLT1-208ENST00000506368 PRSS51A0A1B0GVH4 220 aa16.36■□□□□ 0.21
SCLT1-208ENST00000506368 HNRNPDLO14979 420 aaKnown RBP16.36■□□□□ 0.21
SCLT1-208ENST00000506368 PLA2G6O60733 806 aa16.36■□□□□ 0.21
SCLT1-208ENST00000506368 BMP10O95393 424 aa16.36■□□□□ 0.21
SCLT1-208ENST00000506368 H6PDO95479 791 aa16.36■□□□□ 0.21
SCLT1-208ENST00000506368 TNNI1P19237 187 aa16.36■□□□□ 0.21
SCLT1-208ENST00000506368 PSMA2P25787 234 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms