RNA–Protein interactions for RNA: ENST00000504078.1

USP46-205, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 4

Gene USP46, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-205ENST00000504078 MSTO1Q9BUK6 570 aa3.88□□□□□ -1.79
USP46-205ENST00000504078 GPR174Q9BXC1 333 aa3.88□□□□□ -1.79
USP46-205ENST00000504078 ZHX3Q9H4I2 956 aa3.88□□□□□ -1.79
USP46-205ENST00000504078 PRORYQ9H606 182 aa3.88□□□□□ -1.79
USP46-205ENST00000504078 GAREM1Q9H706 876 aa3.88□□□□□ -1.79
USP46-205ENST00000504078 TMEM206Q9H813 350 aa3.88□□□□□ -1.79
USP46-205ENST00000504078 RPF1Q9H9Y2 349 aaKnown RBP3.88□□□□□ -1.79
USP46-205ENST00000504078 CPNE5Q9HCH3 593 aa3.88□□□□□ -1.79
USP46-205ENST00000504078 TM7SF3Q9NS93 570 aa3.88□□□□□ -1.79
USP46-205ENST00000504078 PDRG1Q9NUG6 133 aa3.88□□□□□ -1.79
USP46-205ENST00000504078 DNAJC17Q9NVM6 304 aaKnown RBP3.88□□□□□ -1.79
USP46-205ENST00000504078 DDX43Q9NXZ2 648 aaKnown RBP3.88□□□□□ -1.79
USP46-205ENST00000504078 GMIPQ9P107 970 aa3.88□□□□□ -1.79
USP46-205ENST00000504078 GCNT4Q9P109 453 aa3.88□□□□□ -1.79
USP46-205ENST00000504078 GTF3C4Q9UKN8 822 aa3.88□□□□□ -1.79
USP46-205ENST00000504078 L1RE1Q9UN81 338 aa3.88□□□□□ -1.79
USP46-205ENST00000504078 CYP46A1Q9Y6A2 500 aa3.88□□□□□ -1.79
USP46-205ENST00000504078 MYH11P35749 1972 aa3.88□□□□□ -1.79
USP46-205ENST00000504078 SHROOM3Q8TF72 1996 aa3.87□□□□□ -1.79
USP46-205ENST00000504078 A0A1W2PQF6 199 aa3.87□□□□□ -1.79
USP46-205ENST00000504078 TBC1D3BA6NDS4 549 aa3.87□□□□□ -1.79
USP46-205ENST00000504078 MYMKA6NI61 221 aa3.87□□□□□ -1.79
USP46-205ENST00000504078 WASH3PC4AMC7 463 aa3.87□□□□□ -1.79
USP46-205ENST00000504078 NEDD8-MDP1E9PL57 170 aa3.87□□□□□ -1.79
USP46-205ENST00000504078 J3QW42 95 aa3.87□□□□□ -1.79
USP46-205ENST00000504078 CLDN5O00501 218 aa3.87□□□□□ -1.79
USP46-205ENST00000504078 PRRG2O14669 202 aa3.87□□□□□ -1.79
USP46-205ENST00000504078 OGTO15294 1046 aa3.87□□□□□ -1.79
USP46-205ENST00000504078 XPOTO43592 962 aaKnown RBP3.87□□□□□ -1.79
USP46-205ENST00000504078 SLC28A2O43868 658 aa3.87□□□□□ -1.79
USP46-205ENST00000504078 FAM189A1O60320 539 aa3.87□□□□□ -1.79
USP46-205ENST00000504078 BRINP1O60477 761 aa3.87□□□□□ -1.79
USP46-205ENST00000504078 TULP3O75386 442 aa3.87□□□□□ -1.79
USP46-205ENST00000504078 NOL4O94818 638 aa3.87□□□□□ -1.79
USP46-205ENST00000504078 CLSTN1O94985 981 aa3.87□□□□□ -1.79
USP46-205ENST00000504078 ITGB3P05106 788 aa3.87□□□□□ -1.79
USP46-205ENST00000504078 CYP11A1P05108 521 aa3.87□□□□□ -1.79
USP46-205ENST00000504078 CLTAP09496 248 aa3.87□□□□□ -1.79
USP46-205ENST00000504078 MBL2P11226 248 aaPredicted RBP3.87□□□□□ -1.79
USP46-205ENST00000504078 NCAM1P13591 858 aa3.87□□□□□ -1.79
USP46-205ENST00000504078 HLA-EP13747 358 aa3.87□□□□□ -1.79
USP46-205ENST00000504078 HDCP19113 662 aa3.87□□□□□ -1.79
USP46-205ENST00000504078 BDNFP23560 247 aa3.87□□□□□ -1.79
USP46-205ENST00000504078 PSMA5P28066 241 aa3.87□□□□□ -1.79
USP46-205ENST00000504078 CD68P34810 354 aaPredicted RBP3.87□□□□□ -1.79
USP46-205ENST00000504078 MATKP42679 507 aa3.87□□□□□ -1.79
USP46-205ENST00000504078 CSNK1EP49674 416 aaKnown RBP3.87□□□□□ -1.79
USP46-205ENST00000504078 CACNA2D1P54289 1103 aa3.87□□□□□ -1.79
USP46-205ENST00000504078 EVCP57679 992 aa3.87□□□□□ -1.79
USP46-205ENST00000504078 MRPS21P82921 87 aaKnown RBP3.87□□□□□ -1.79
USP46-205ENST00000504078 TFAMQ00059 246 aaKnown RBP3.87□□□□□ -1.79
USP46-205ENST00000504078 CYP27A1Q02318 531 aa3.87□□□□□ -1.79
USP46-205ENST00000504078 AAMPQ13685 434 aa3.87□□□□□ -1.79
USP46-205ENST00000504078 PDIA5Q14554 519 aa3.87□□□□□ -1.79
USP46-205ENST00000504078 ZBTB6Q15916 424 aa3.87□□□□□ -1.79
USP46-205ENST00000504078 ZNF124Q15973 351 aa3.87□□□□□ -1.79
USP46-205ENST00000504078 CPSF6Q16630 551 aaKnown RBP eCLIP3.87□□□□□ -1.79
USP46-205ENST00000504078 MSMPQ1L6U9 139 aa3.87□□□□□ -1.79
USP46-205ENST00000504078 HLA-BQ31612 363 aa3.87□□□□□ -1.79
USP46-205ENST00000504078 KCNT1Q5JUK3 1230 aa3.87□□□□□ -1.79
USP46-205ENST00000504078 TTC38Q5R3I4 469 aa3.87□□□□□ -1.79
USP46-205ENST00000504078 PRAMEF14Q5SWL7 426 aa3.87□□□□□ -1.79
USP46-205ENST00000504078 ARHGAP40Q5TG30 622 aa3.87□□□□□ -1.79
USP46-205ENST00000504078 HES3Q5TGS1 186 aa3.87□□□□□ -1.79
USP46-205ENST00000504078 DCAF12L1Q5VU92 463 aa3.87□□□□□ -1.79
USP46-205ENST00000504078 RINT1Q6NUQ1 792 aa3.87□□□□□ -1.79
USP46-205ENST00000504078 SLC36A4Q6YBV0 504 aa3.87□□□□□ -1.79
USP46-205ENST00000504078 TPGS1Q6ZTW0 290 aa3.87□□□□□ -1.79
USP46-205ENST00000504078 SPATA2LQ8IUW3 424 aaPredicted RBP3.87□□□□□ -1.79
USP46-205ENST00000504078 BBS7Q8IWZ6 715 aa3.87□□□□□ -1.79
USP46-205ENST00000504078 CHPFQ8IZ52 775 aa3.87□□□□□ -1.79
USP46-205ENST00000504078 DCP1BQ8IZD4 617 aaKnown RBP3.87□□□□□ -1.79
USP46-205ENST00000504078 ADGRF2Q8IZF7 708 aa3.87□□□□□ -1.79
USP46-205ENST00000504078 THEM5Q8N1Q8 247 aa3.87□□□□□ -1.79
USP46-205ENST00000504078 ZNF366Q8N895 744 aa3.87□□□□□ -1.79
USP46-205ENST00000504078 TERB1Q8NA31 727 aa3.87□□□□□ -1.79
USP46-205ENST00000504078 AGBL5Q8NDL9 886 aa3.87□□□□□ -1.79
USP46-205ENST00000504078 NSUN7Q8NE18 718 aaKnown RBP3.87□□□□□ -1.79
USP46-205ENST00000504078 CEP76Q8TAP6 659 aa3.87□□□□□ -1.79
USP46-205ENST00000504078 BAHD1Q8TBE0 780 aaPredicted RBP3.87□□□□□ -1.79
USP46-205ENST00000504078 IPO4Q8TEX9 1081 aaKnown RBP3.87□□□□□ -1.79
USP46-205ENST00000504078 KCNB2Q92953 911 aa3.87□□□□□ -1.79
USP46-205ENST00000504078 JAKMIP2Q96AA8 810 aa3.87□□□□□ -1.79
USP46-205ENST00000504078 ELMO3Q96BJ8 720 aa3.87□□□□□ -1.79
USP46-205ENST00000504078 NXPE2Q96DL1 559 aa3.87□□□□□ -1.79
USP46-205ENST00000504078 SAAL1Q96ER3 474 aa3.87□□□□□ -1.79
USP46-205ENST00000504078 TOE1Q96GM8 510 aaKnown RBP3.87□□□□□ -1.79
USP46-205ENST00000504078 ZNF560Q96MR9 790 aa3.87□□□□□ -1.79
USP46-205ENST00000504078 SYT15Q9BQS2 421 aa3.87□□□□□ -1.79
USP46-205ENST00000504078 KCNF1Q9H3M0 494 aa3.87□□□□□ -1.79
USP46-205ENST00000504078 CLMPQ9H6B4 373 aa3.87□□□□□ -1.79
USP46-205ENST00000504078 CAAP1Q9H8G2 361 aa3.87□□□□□ -1.79
USP46-205ENST00000504078 UTP3Q9NQZ2 479 aaKnown RBP eCLIP3.87□□□□□ -1.79
USP46-205ENST00000504078 PLK2Q9NYY3 685 aa3.87□□□□□ -1.79
USP46-205ENST00000504078 UXTQ9UBK9 157 aaPredicted RBP3.87□□□□□ -1.79
USP46-205ENST00000504078 EIF2B4Q9UI10 523 aaKnown RBP3.87□□□□□ -1.79
USP46-205ENST00000504078 MAFFQ9ULX9 164 aa3.87□□□□□ -1.79
USP46-205ENST00000504078 ARHGAP26Q9UNA1 814 aa3.87□□□□□ -1.79
USP46-205ENST00000504078 TRIM33Q9UPN9 1127 aa3.87□□□□□ -1.79
USP46-205ENST00000504078 SNX11Q9Y5W9 270 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 160.1 ms