RNA–Protein interactions for RNA: ENST00000503468.5

NEDD4-204, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 6,339 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-204ENST00000503468 PGM2L1Q6PCE3 622 aa2.88□□□□□ -1.95
NEDD4-204ENST00000503468 C19orf48Q6RUI8 117 aa2.88□□□□□ -1.95
NEDD4-204ENST00000503468 DTHD1Q6ZMT9 781 aa2.88□□□□□ -1.95
NEDD4-204ENST00000503468 LRRTM3Q86VH5 581 aa2.88□□□□□ -1.95
NEDD4-204ENST00000503468 ERO1BQ86YB8 467 aa2.88□□□□□ -1.95
NEDD4-204ENST00000503468 PHTF2Q8N3S3 785 aa2.88□□□□□ -1.95
NEDD4-204ENST00000503468 SYNPOQ8N3V7 929 aa2.88□□□□□ -1.95
NEDD4-204ENST00000503468 AFAP1L2Q8N4X5 818 aa2.88□□□□□ -1.95
NEDD4-204ENST00000503468 LEMD2Q8NC56 503 aa2.88□□□□□ -1.95
NEDD4-204ENST00000503468 ADCY4Q8NFM4 1077 aa2.88□□□□□ -1.95
NEDD4-204ENST00000503468 GRPEL2Q8TAA5 225 aa2.88□□□□□ -1.95
NEDD4-204ENST00000503468 GAB3Q8WWW8 586 aa2.88□□□□□ -1.95
NEDD4-204ENST00000503468 NLRP7Q8WX94 980 aa2.88□□□□□ -1.95
NEDD4-204ENST00000503468 RFFLQ8WZ73 363 aa2.88□□□□□ -1.95
NEDD4-204ENST00000503468 ABTB1Q969K4 478 aaPredicted RBP2.88□□□□□ -1.95
NEDD4-204ENST00000503468 EME1Q96AY2 570 aa2.88□□□□□ -1.95
NEDD4-204ENST00000503468 CALML4Q96GE6 196 aa2.88□□□□□ -1.95
NEDD4-204ENST00000503468 CDHR1Q96JP9 859 aa2.88□□□□□ -1.95
NEDD4-204ENST00000503468 NLRP4Q96MN2 994 aa2.88□□□□□ -1.95
NEDD4-204ENST00000503468 C7orf26Q96N11 449 aa2.88□□□□□ -1.95
NEDD4-204ENST00000503468 ZNF285Q96NJ3 590 aa2.88□□□□□ -1.95
NEDD4-204ENST00000503468 TBCBQ99426 244 aa2.88□□□□□ -1.95
NEDD4-204ENST00000503468 PTPN18Q99952 460 aa2.88□□□□□ -1.95
NEDD4-204ENST00000503468 WDR11Q9BZH6 1224 aa2.88□□□□□ -1.95
NEDD4-204ENST00000503468 CRNKL1Q9BZJ0 848 aaKnown RBP2.88□□□□□ -1.95
NEDD4-204ENST00000503468 NT5C3AQ9H0P0 336 aa2.88□□□□□ -1.95
NEDD4-204ENST00000503468 SEMA6BQ9H3T3 888 aa2.88□□□□□ -1.95
NEDD4-204ENST00000503468 TRPC7Q9HCX4 862 aa2.88□□□□□ -1.95
NEDD4-204ENST00000503468 NTMQ9P121 344 aa2.88□□□□□ -1.95
NEDD4-204ENST00000503468 ARMCX3Q9UH62 379 aaPredicted RBP2.88□□□□□ -1.95
NEDD4-204ENST00000503468 FBXW11Q9UKB1 542 aa2.88□□□□□ -1.95
NEDD4-204ENST00000503468 STX8Q9UNK0 236 aa2.88□□□□□ -1.95
NEDD4-204ENST00000503468 ZNF711Q9Y462 761 aa2.88□□□□□ -1.95
NEDD4-204ENST00000503468 TMEM120BA0PK00 339 aa2.88□□□□□ -1.95
NEDD4-204ENST00000503468 C7orf72A4D263 438 aa2.88□□□□□ -1.95
NEDD4-204ENST00000503468 GOLGA8MH3BSY2 632 aa2.88□□□□□ -1.95
NEDD4-204ENST00000503468 DDX3XO00571 662 aaKnown RBP eCLIP2.88□□□□□ -1.95
NEDD4-204ENST00000503468 EDF1O60869 148 aaKnown RBP2.88□□□□□ -1.95
NEDD4-204ENST00000503468 DNAJC6O75061 913 aa2.88□□□□□ -1.95
NEDD4-204ENST00000503468 TRPA1O75762 1119 aa2.88□□□□□ -1.95
NEDD4-204ENST00000503468 RAF1P04049 648 aa2.88□□□□□ -1.95
NEDD4-204ENST00000503468 STMN1P16949 149 aa2.88□□□□□ -1.95
NEDD4-204ENST00000503468 ACAT1P24752 427 aaKnown RBP2.88□□□□□ -1.95
NEDD4-204ENST00000503468 KRT76Q01546 638 aa2.88□□□□□ -1.95
NEDD4-204ENST00000503468 DR1Q01658 176 aa2.88□□□□□ -1.95
NEDD4-204ENST00000503468 TFAP4Q01664 338 aa2.88□□□□□ -1.95
NEDD4-204ENST00000503468 C2orf54Q08AI8 447 aa2.88□□□□□ -1.95
NEDD4-204ENST00000503468 ZNF252P-AS1Q0IIN9 211 aa2.88□□□□□ -1.95
NEDD4-204ENST00000503468 ARHGEF6Q15052 776 aa2.88□□□□□ -1.95
NEDD4-204ENST00000503468 TSC22D1Q15714 1073 aa2.88□□□□□ -1.95
NEDD4-204ENST00000503468 CDKN3Q16667 212 aa2.88□□□□□ -1.95
NEDD4-204ENST00000503468 KYAT1Q16773 422 aa2.88□□□□□ -1.95
NEDD4-204ENST00000503468 ZNF394Q53GI3 561 aa2.88□□□□□ -1.95
NEDD4-204ENST00000503468 PPP6R3Q5H9R7 873 aaPredicted RBP2.88□□□□□ -1.95
NEDD4-204ENST00000503468 ATG16L1Q676U5 607 aa2.88□□□□□ -1.95
NEDD4-204ENST00000503468 TTC23LQ6PF05 361 aa2.88□□□□□ -1.95
NEDD4-204ENST00000503468 USP49Q70CQ1 688 aa2.88□□□□□ -1.95
NEDD4-204ENST00000503468 BRSK2Q8IWQ3 736 aa2.88□□□□□ -1.95
NEDD4-204ENST00000503468 SCUBE1Q8IWY4 988 aa2.88□□□□□ -1.95
NEDD4-204ENST00000503468 ICA1LQ8NDH6 482 aa2.88□□□□□ -1.95
NEDD4-204ENST00000503468 GDAP1Q8TB36 358 aa2.88□□□□□ -1.95
NEDD4-204ENST00000503468 KCNV2Q8TDN2 545 aa2.88□□□□□ -1.95
NEDD4-204ENST00000503468 PRPF31Q8WWY3 499 aaKnown RBP2.88□□□□□ -1.95
NEDD4-204ENST00000503468 POP5Q969H6 163 aaKnown RBP2.88□□□□□ -1.95
NEDD4-204ENST00000503468 CMTM5Q96DZ9 223 aa2.88□□□□□ -1.95
NEDD4-204ENST00000503468 CNPY3Q9BT09 278 aa2.88□□□□□ -1.95
NEDD4-204ENST00000503468 YTHDF1Q9BYJ9 559 aaKnown RBP2.88□□□□□ -1.95
NEDD4-204ENST00000503468 DCLK3Q9C098 648 aa2.88□□□□□ -1.95
NEDD4-204ENST00000503468 ARHGEF10LQ9HCE6 1279 aa2.88□□□□□ -1.95
NEDD4-204ENST00000503468 CNGB3Q9NQW8 809 aa2.88□□□□□ -1.95
NEDD4-204ENST00000503468 CHMP2BQ9UQN3 213 aa2.88□□□□□ -1.95
NEDD4-204ENST00000503468 IFT52Q9Y366 437 aa2.88□□□□□ -1.95
NEDD4-204ENST00000503468 SBDSQ9Y3A5 250 aaKnown RBP eCLIP2.88□□□□□ -1.95
NEDD4-204ENST00000503468 GMPPBQ9Y5P6 360 aa2.88□□□□□ -1.95
NEDD4-204ENST00000503468 NUMBLQ9Y6R0 609 aa2.88□□□□□ -1.95
NEDD4-204ENST00000503468 ZHX2Q9Y6X8 837 aa2.88□□□□□ -1.95
NEDD4-204ENST00000503468 GVINP1Q7Z2Y8 2422 aa2.88□□□□□ -1.95
NEDD4-204ENST00000503468 FAM25AB3EWG3 89 aa2.88□□□□□ -1.95
NEDD4-204ENST00000503468 FAM25CB3EWG5 89 aa2.88□□□□□ -1.95
NEDD4-204ENST00000503468 FAM25GB3EWG6 89 aa2.88□□□□□ -1.95
NEDD4-204ENST00000503468 RAD51CO43502 376 aa2.88□□□□□ -1.95
NEDD4-204ENST00000503468 BUB1O43683 1085 aa2.88□□□□□ -1.95
NEDD4-204ENST00000503468 KRT75O95678 551 aa2.88□□□□□ -1.95
NEDD4-204ENST00000503468 RPN1P04843 607 aaKnown RBP2.88□□□□□ -1.95
NEDD4-204ENST00000503468 CDH3P22223 829 aa2.88□□□□□ -1.95
NEDD4-204ENST00000503468 CA4P22748 312 aa2.88□□□□□ -1.95
NEDD4-204ENST00000503468 CRABP2P29373 138 aa2.88□□□□□ -1.95
NEDD4-204ENST00000503468 CYP27A1Q02318 531 aa2.88□□□□□ -1.95
NEDD4-204ENST00000503468 NR1D2Q14995 579 aa2.88□□□□□ -1.95
NEDD4-204ENST00000503468 BOLA3Q53S33 107 aa2.88□□□□□ -1.95
NEDD4-204ENST00000503468 TCHHL1Q5QJ38 904 aaPredicted RBP2.88□□□□□ -1.95
NEDD4-204ENST00000503468 TTC38Q5R3I4 469 aa2.88□□□□□ -1.95
NEDD4-204ENST00000503468 KYAT3Q6YP21 454 aaKnown RBP2.88□□□□□ -1.95
NEDD4-204ENST00000503468 STXBP4Q6ZWJ1 553 aa2.88□□□□□ -1.95
NEDD4-204ENST00000503468 ARFGAP1Q8N6T3 406 aa2.88□□□□□ -1.95
NEDD4-204ENST00000503468 TRIML2Q8N7C3 387 aa2.88□□□□□ -1.95
NEDD4-204ENST00000503468 DEPTORQ8TB45 409 aa2.88□□□□□ -1.95
NEDD4-204ENST00000503468 HM13Q8TCT9 377 aa2.88□□□□□ -1.95
NEDD4-204ENST00000503468 TGS1Q96RS0 853 aaKnown RBP2.88□□□□□ -1.95
NEDD4-204ENST00000503468 BTBD10Q9BSF8 475 aa2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 103.6 ms