RNA–Protein interactions for RNA: ENST00000502453.1

SUB1-202, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

TSL 1 (best)

Gene SUB1, Length 4,273 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-202ENST00000502453 ANKRD44Q8N8A2 993 aa3.92□□□□□ -1.78
SUB1-202ENST00000502453 NFKBIDQ8NI38 313 aa3.92□□□□□ -1.78
SUB1-202ENST00000502453 CPT1BQ92523 772 aa3.92□□□□□ -1.78
SUB1-202ENST00000502453 MR1Q95460 341 aa3.92□□□□□ -1.78
SUB1-202ENST00000502453 EID2BQ96D98 161 aa3.92□□□□□ -1.78
SUB1-202ENST00000502453 AGAP2Q99490 1192 aa3.92□□□□□ -1.78
SUB1-202ENST00000502453 MMP19Q99542 508 aa3.92□□□□□ -1.78
SUB1-202ENST00000502453 NAA11Q9BSU3 229 aaPredicted RBP3.92□□□□□ -1.78
SUB1-202ENST00000502453 CARD6Q9BX69 1037 aa3.92□□□□□ -1.78
SUB1-202ENST00000502453 RNF32Q9H0A6 362 aa3.92□□□□□ -1.78
SUB1-202ENST00000502453 A1CFQ9NQ94 594 aaKnown RBP3.92□□□□□ -1.78
SUB1-202ENST00000502453 SEMA3GQ9NS98 782 aa3.92□□□□□ -1.78
SUB1-202ENST00000502453 NDUFAF4Q9P032 175 aa3.92□□□□□ -1.78
SUB1-202ENST00000502453 TMPRSS11EQ9UL52 423 aa3.92□□□□□ -1.78
SUB1-202ENST00000502453 NESP48681 1621 aa3.92□□□□□ -1.78
SUB1-202ENST00000502453 OR6C76A6NM76 312 aa3.92□□□□□ -1.78
SUB1-202ENST00000502453 CLCA1A8K7I4 914 aa3.92□□□□□ -1.78
SUB1-202ENST00000502453 KIF28PB7ZC32 967 aa3.92□□□□□ -1.78
SUB1-202ENST00000502453 DNM1LO00429 736 aa3.92□□□□□ -1.78
SUB1-202ENST00000502453 AKR7A3O95154 331 aa3.92□□□□□ -1.78
SUB1-202ENST00000502453 DLGAP3O95886 979 aa3.92□□□□□ -1.78
SUB1-202ENST00000502453 TUBBP07437 444 aa3.92□□□□□ -1.78
SUB1-202ENST00000502453 ETV1P50549 477 aa3.92□□□□□ -1.78
SUB1-202ENST00000502453 ZNF81P51508 661 aa3.92□□□□□ -1.78
SUB1-202ENST00000502453 ATXN3P54252 364 aaPredicted RBP3.92□□□□□ -1.78
SUB1-202ENST00000502453 SESN2P58004 480 aaPredicted RBP3.92□□□□□ -1.78
SUB1-202ENST00000502453 PPP3CAQ08209 521 aa3.92□□□□□ -1.78
SUB1-202ENST00000502453 INAQ16352 499 aa3.92□□□□□ -1.78
SUB1-202ENST00000502453 TAZQ16635 292 aa3.92□□□□□ -1.78
SUB1-202ENST00000502453 SH2D4BQ5SQS7 431 aa3.92□□□□□ -1.78
SUB1-202ENST00000502453 DCAF12L1Q5VU92 463 aa3.92□□□□□ -1.78
SUB1-202ENST00000502453 CAPRIN2Q6IMN6 1127 aaKnown RBP3.92□□□□□ -1.78
SUB1-202ENST00000502453 LETMD1Q6P1Q0 360 aa3.92□□□□□ -1.78
SUB1-202ENST00000502453 CHST3Q7LGC8 479 aa3.92□□□□□ -1.78
SUB1-202ENST00000502453 NUDT13Q86X67 352 aa3.92□□□□□ -1.78
SUB1-202ENST00000502453 FAM9CQ8IZT9 166 aa3.92□□□□□ -1.78
SUB1-202ENST00000502453 IL22RA1Q8N6P7 574 aa3.92□□□□□ -1.78
SUB1-202ENST00000502453 HASPINQ8TF76 798 aa3.92□□□□□ -1.78
SUB1-202ENST00000502453 GAB3Q8WWW8 586 aa3.92□□□□□ -1.78
SUB1-202ENST00000502453 DDX17Q92841 729 aaKnown RBP3.92□□□□□ -1.78
SUB1-202ENST00000502453 KLHDC7BQ96G42 594 aa3.92□□□□□ -1.78
SUB1-202ENST00000502453 SPATA13Q96N96 652 aa3.92□□□□□ -1.78
SUB1-202ENST00000502453 WDFY2Q96P53 400 aa3.92□□□□□ -1.78
SUB1-202ENST00000502453 PIDD1Q9HB75 910 aa3.92□□□□□ -1.78
SUB1-202ENST00000502453 ABCB8Q9NUT2 735 aa3.92□□□□□ -1.78
SUB1-202ENST00000502453 PPP1R14DQ9NXH3 145 aa3.92□□□□□ -1.78
SUB1-202ENST00000502453 IL1RAPL1Q9NZN1 696 aa3.92□□□□□ -1.78
SUB1-202ENST00000502453 TMOD2Q9NZR1 351 aa3.92□□□□□ -1.78
SUB1-202ENST00000502453 SUCLA2Q9P2R7 463 aaPredicted RBP3.92□□□□□ -1.78
SUB1-202ENST00000502453 IL19Q9UHD0 177 aa3.92□□□□□ -1.78
SUB1-202ENST00000502453 TIMM13Q9Y5L4 95 aaPredicted RBP3.92□□□□□ -1.78
SUB1-202ENST00000502453 CDY2AQ9Y6F7 541 aa3.92□□□□□ -1.78
SUB1-202ENST00000502453 TTC41PQ6P2S7 1318 aa3.92□□□□□ -1.78
SUB1-202ENST00000502453 MTX2O75431 263 aa3.92□□□□□ -1.78
SUB1-202ENST00000502453 DIRAS3O95661 229 aa3.92□□□□□ -1.78
SUB1-202ENST00000502453 CNPP09543 421 aaKnown RBP3.92□□□□□ -1.78
SUB1-202ENST00000502453 WEE2P0C1S8 567 aa3.92□□□□□ -1.78
SUB1-202ENST00000502453 EGR1P18146 543 aa3.92□□□□□ -1.78
SUB1-202ENST00000502453 GNL1P36915 607 aaPredicted RBP3.92□□□□□ -1.78
SUB1-202ENST00000502453 MAGEA10P43363 369 aaPredicted RBP3.92□□□□□ -1.78
SUB1-202ENST00000502453 VPS41P49754 854 aa3.92□□□□□ -1.78
SUB1-202ENST00000502453 GAS6Q14393 721 aa3.92□□□□□ -1.78
SUB1-202ENST00000502453 GRM4Q14833 912 aa3.92□□□□□ -1.78
SUB1-202ENST00000502453 EPHA7Q15375 998 aa3.92□□□□□ -1.78
SUB1-202ENST00000502453 PPP1R21Q6ZMI0 780 aa3.92□□□□□ -1.78
SUB1-202ENST00000502453 ARMCX2Q7L311 632 aa3.92□□□□□ -1.78
SUB1-202ENST00000502453 ZNF598Q86UK7 904 aaKnown RBP3.92□□□□□ -1.78
SUB1-202ENST00000502453 C7orf57Q8NEG2 295 aa3.92□□□□□ -1.78
SUB1-202ENST00000502453 HMGB4Q8WW32 186 aa3.92□□□□□ -1.78
SUB1-202ENST00000502453 ZKSCAN4Q969J2 545 aaPredicted RBP3.92□□□□□ -1.78
SUB1-202ENST00000502453 NRBF2Q96F24 287 aa3.92□□□□□ -1.78
SUB1-202ENST00000502453 BTBD6Q96KE9 485 aa3.92□□□□□ -1.78
SUB1-202ENST00000502453 FERMT1Q9BQL6 677 aa3.92□□□□□ -1.78
SUB1-202ENST00000502453 CCDC106Q9BWC9 280 aa3.92□□□□□ -1.78
SUB1-202ENST00000502453 GCOM2Q9BZD3 368 aaPredicted RBP3.92□□□□□ -1.78
SUB1-202ENST00000502453 NRSN2Q9GZP1 204 aa3.92□□□□□ -1.78
SUB1-202ENST00000502453 EHD1Q9H4M9 534 aa3.92□□□□□ -1.78
SUB1-202ENST00000502453 GLRX2Q9NS18 164 aa3.92□□□□□ -1.78
SUB1-202ENST00000502453 MARCH2Q9P0N8 246 aa3.92□□□□□ -1.78
SUB1-202ENST00000502453 MTUS1Q9ULD2 1270 aa3.92□□□□□ -1.78
SUB1-202ENST00000502453 SNX9Q9Y5X1 595 aa3.92□□□□□ -1.78
SUB1-202ENST00000502453 SOBPA7XYQ1 873 aa3.92□□□□□ -1.78
SUB1-202ENST00000502453 J3KTA2 159 aa3.92□□□□□ -1.78
SUB1-202ENST00000502453 LMNAP02545 664 aaKnown RBP3.92□□□□□ -1.78
SUB1-202ENST00000502453 ABCB1P08183 1280 aaPredicted RBP3.92□□□□□ -1.78
SUB1-202ENST00000502453 CDH3P22223 829 aa3.92□□□□□ -1.78
SUB1-202ENST00000502453 IL1R2P27930 398 aa3.92□□□□□ -1.78
SUB1-202ENST00000502453 MC5RP33032 325 aa3.92□□□□□ -1.78
SUB1-202ENST00000502453 EPS15P42566 896 aa3.92□□□□□ -1.78
SUB1-202ENST00000502453 MAGEA4P43358 317 aa3.92□□□□□ -1.78
SUB1-202ENST00000502453 CCT8P50990 548 aa3.92□□□□□ -1.78
SUB1-202ENST00000502453 PER3P56645 1201 aa3.92□□□□□ -1.78
SUB1-202ENST00000502453 NOMO3P69849 1222 aa3.92□□□□□ -1.78
SUB1-202ENST00000502453 CYP4F8P98187 520 aa3.92□□□□□ -1.78
SUB1-202ENST00000502453 TARDBPQ13148 414 aaKnown RBP eCLIP3.92□□□□□ -1.78
SUB1-202ENST00000502453 RIPK1Q13546 671 aa3.92□□□□□ -1.78
SUB1-202ENST00000502453 RAB32Q13637 225 aa3.92□□□□□ -1.78
SUB1-202ENST00000502453 KARSQ15046 597 aaKnown RBP3.92□□□□□ -1.78
SUB1-202ENST00000502453 MCMDC2Q4G0Z9 681 aa3.92□□□□□ -1.78
SUB1-202ENST00000502453 ZRANB3Q5FWF4 1079 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms