RNA–Protein interactions for RNA: ENST00000502313.1

HMGB1P21-201, Transcript of high mobility group box 1 pseudogene 21, humanhuman

BASIC

Gene HMGB1P21, Length 581 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P21-201ENST00000502313 MID2Q9UJV3 735 aa4.64□□□□□ -1.67
HMGB1P21-201ENST00000502313 KCND3Q9UK17 655 aa4.64□□□□□ -1.67
HMGB1P21-201ENST00000502313 CROTQ9UKG9 612 aa4.64□□□□□ -1.67
HMGB1P21-201ENST00000502313 CORO1CQ9ULV4 474 aaPredicted RBP4.64□□□□□ -1.67
HMGB1P21-201ENST00000502313 FAM169AQ9Y6X4 670 aa4.64□□□□□ -1.67
HMGB1P21-201ENST00000502313 THSD7AQ9UPZ6 1657 aa4.64□□□□□ -1.67
HMGB1P21-201ENST00000502313 ABCC6O95255 1503 aa4.63□□□□□ -1.67
HMGB1P21-201ENST00000502313 A0A1W2PQ09 198 aa4.63□□□□□ -1.67
HMGB1P21-201ENST00000502313 HRKO00198 91 aa4.63□□□□□ -1.67
HMGB1P21-201ENST00000502313 TAF4O00268 1085 aa4.63□□□□□ -1.67
HMGB1P21-201ENST00000502313 PCDH17O14917 1159 aa4.63□□□□□ -1.67
HMGB1P21-201ENST00000502313 KCNQ3O43525 872 aa4.63□□□□□ -1.67
HMGB1P21-201ENST00000502313 ADAM23O75077 832 aa4.63□□□□□ -1.67
HMGB1P21-201ENST00000502313 RASSF9O75901 435 aa4.63□□□□□ -1.67
HMGB1P21-201ENST00000502313 AMY1AP04745 511 aa4.63□□□□□ -1.67
HMGB1P21-201ENST00000502313 CKBP12277 381 aa4.63□□□□□ -1.67
HMGB1P21-201ENST00000502313 EGR1P18146 543 aa4.63□□□□□ -1.67
HMGB1P21-201ENST00000502313 IL1R2P27930 398 aa4.63□□□□□ -1.67
HMGB1P21-201ENST00000502313 TM4SF1P30408 202 aa4.63□□□□□ -1.67
HMGB1P21-201ENST00000502313 VIPR1P32241 457 aa4.63□□□□□ -1.67
HMGB1P21-201ENST00000502313 CIITAP33076 1130 aa4.63□□□□□ -1.67
HMGB1P21-201ENST00000502313 ADCY8P40145 1251 aa4.63□□□□□ -1.67
HMGB1P21-201ENST00000502313 ZNF41P51814 821 aaPredicted RBP4.63□□□□□ -1.67
HMGB1P21-201ENST00000502313 RAD23AP54725 363 aa4.63□□□□□ -1.67
HMGB1P21-201ENST00000502313 PER3P56645 1201 aa4.63□□□□□ -1.67
HMGB1P21-201ENST00000502313 YBEYP58557 167 aaPredicted RBP4.63□□□□□ -1.67
HMGB1P21-201ENST00000502313 SRSF3P84103 164 aaKnown RBP4.63□□□□□ -1.67
HMGB1P21-201ENST00000502313 COASYQ13057 564 aa4.63□□□□□ -1.67
HMGB1P21-201ENST00000502313 MTA1Q13330 715 aa4.63□□□□□ -1.67
HMGB1P21-201ENST00000502313 PUM1Q14671 1186 aaKnown RBP eCLIP4.63□□□□□ -1.67
HMGB1P21-201ENST00000502313 RAB39AQ14964 217 aa4.63□□□□□ -1.67
HMGB1P21-201ENST00000502313 DCAF12L1Q5VU92 463 aa4.63□□□□□ -1.67
HMGB1P21-201ENST00000502313 TAF2Q6P1X5 1199 aa4.63□□□□□ -1.67
HMGB1P21-201ENST00000502313 LIPIQ6XZB0 460 aa4.63□□□□□ -1.67
HMGB1P21-201ENST00000502313 Q6ZVL8 140 aa4.63□□□□□ -1.67
HMGB1P21-201ENST00000502313 GLRX5Q86SX6 157 aa4.63□□□□□ -1.67
HMGB1P21-201ENST00000502313 ATG4DQ86TL0 474 aaPredicted RBP4.63□□□□□ -1.67
HMGB1P21-201ENST00000502313 FAM129CQ86XR2 697 aa4.63□□□□□ -1.67
HMGB1P21-201ENST00000502313 CCDC28AQ8IWP9 274 aa4.63□□□□□ -1.67
HMGB1P21-201ENST00000502313 THNSL1Q8IYQ7 743 aa4.63□□□□□ -1.67
HMGB1P21-201ENST00000502313 WDTC1Q8N5D0 677 aa4.63□□□□□ -1.67
HMGB1P21-201ENST00000502313 DTX3Q8N9I9 347 aa4.63□□□□□ -1.67
HMGB1P21-201ENST00000502313 METTL6Q8TCB7 284 aa4.63□□□□□ -1.67
HMGB1P21-201ENST00000502313 CPA5Q8WXQ8 436 aa4.63□□□□□ -1.67
HMGB1P21-201ENST00000502313 HOXB13Q92826 284 aaPredicted RBP4.63□□□□□ -1.67
HMGB1P21-201ENST00000502313 KCNN1Q92952 543 aa4.63□□□□□ -1.67
HMGB1P21-201ENST00000502313 PTP4A1Q93096 173 aa4.63□□□□□ -1.67
HMGB1P21-201ENST00000502313 VPS33AQ96AX1 596 aa4.63□□□□□ -1.67
HMGB1P21-201ENST00000502313 ZSWIM3Q96MP5 696 aa4.63□□□□□ -1.67
HMGB1P21-201ENST00000502313 UHRF1Q96T88 793 aaPredicted RBP4.63□□□□□ -1.67
HMGB1P21-201ENST00000502313 AMNQ9BXJ7 453 aa4.63□□□□□ -1.67
HMGB1P21-201ENST00000502313 BRD8Q9H0E9 1235 aa4.63□□□□□ -1.67
HMGB1P21-201ENST00000502313 TP63Q9H3D4 680 aaPredicted RBP4.63□□□□□ -1.67
HMGB1P21-201ENST00000502313 LDAHQ9H6V9 325 aa4.63□□□□□ -1.67
HMGB1P21-201ENST00000502313 MANSC1Q9H8J5 431 aa4.63□□□□□ -1.67
HMGB1P21-201ENST00000502313 ERVMER34-1Q9H9K5 563 aa4.63□□□□□ -1.67
HMGB1P21-201ENST00000502313 PCDHB16Q9NRJ7 776 aa4.63□□□□□ -1.67
HMGB1P21-201ENST00000502313 ZDHHC7Q9NXF8 308 aa4.63□□□□□ -1.67
HMGB1P21-201ENST00000502313 HSPBP1Q9NZL4 362 aa4.63□□□□□ -1.67
HMGB1P21-201ENST00000502313 RBPJLQ9UBG7 517 aa4.63□□□□□ -1.67
HMGB1P21-201ENST00000502313 MOSPD1Q9UJG1 213 aa4.63□□□□□ -1.67
HMGB1P21-201ENST00000502313 COG5Q9UP83 839 aa4.63□□□□□ -1.67
HMGB1P21-201ENST00000502313 MED16Q9Y2X0 877 aa4.63□□□□□ -1.67
HMGB1P21-201ENST00000502313 DTNAQ9Y4J8 743 aa4.63□□□□□ -1.67
HMGB1P21-201ENST00000502313 IKBKGQ9Y6K9 419 aa4.63□□□□□ -1.67
HMGB1P21-201ENST00000502313 TTC21BQ7Z4L5 1316 aa4.63□□□□□ -1.67
HMGB1P21-201ENST00000502313 EVC2Q86UK5 1308 aa4.63□□□□□ -1.67
HMGB1P21-201ENST00000502313 PLCH1Q4KWH8 1693 aa4.63□□□□□ -1.67
HMGB1P21-201ENST00000502313 A0A1W2PP64 1363 aa4.63□□□□□ -1.67
HMGB1P21-201ENST00000502313 AATKQ6ZMQ8 1374 aa4.63□□□□□ -1.67
HMGB1P21-201ENST00000502313 NINLQ9Y2I6 1382 aa4.63□□□□□ -1.67
HMGB1P21-201ENST00000502313 COL14A1Q05707 1796 aaKnown RBP4.63□□□□□ -1.67
HMGB1P21-201ENST00000502313 GOLGB1Q14789 3259 aaKnown RBP4.62□□□□□ -1.67
HMGB1P21-201ENST00000502313 MYOM1P52179 1685 aa4.62□□□□□ -1.67
HMGB1P21-201ENST00000502313 A0A0A6YYJ9 748 aa4.62□□□□□ -1.67
HMGB1P21-201ENST00000502313 TSPAN3O60637 253 aa4.62□□□□□ -1.67
HMGB1P21-201ENST00000502313 PPP6R2O75170 966 aa4.62□□□□□ -1.67
HMGB1P21-201ENST00000502313 STAM2O75886 525 aa4.62□□□□□ -1.67
HMGB1P21-201ENST00000502313 MPIG6BO95866 241 aa4.62□□□□□ -1.67
HMGB1P21-201ENST00000502313 GCP02774 474 aa4.62□□□□□ -1.67
HMGB1P21-201ENST00000502313 SNRNP70P08621 437 aaKnown RBP4.62□□□□□ -1.67
HMGB1P21-201ENST00000502313 RARGP13631 454 aa4.62□□□□□ -1.67
HMGB1P21-201ENST00000502313 GAP43P17677 238 aa4.62□□□□□ -1.67
HMGB1P21-201ENST00000502313 HLA-DPA1P20036 260 aa4.62□□□□□ -1.67
HMGB1P21-201ENST00000502313 NFKBIAP25963 317 aa4.62□□□□□ -1.67
HMGB1P21-201ENST00000502313 EPHA8P29322 1005 aaPredicted RBP4.62□□□□□ -1.67
HMGB1P21-201ENST00000502313 ECHS1P30084 290 aa4.62□□□□□ -1.67
HMGB1P21-201ENST00000502313 AKT1P31749 480 aa4.62□□□□□ -1.67
HMGB1P21-201ENST00000502313 RBM5P52756 815 aaKnown RBP eCLIP4.62□□□□□ -1.67
HMGB1P21-201ENST00000502313 ALDH18A1P54886 795 aaKnown RBP4.62□□□□□ -1.67
HMGB1P21-201ENST00000502313 YBX1P67809 324 aaKnown RBP4.62□□□□□ -1.67
HMGB1P21-201ENST00000502313 FSTL1Q12841 308 aa4.62□□□□□ -1.67
HMGB1P21-201ENST00000502313 RAB32Q13637 225 aa4.62□□□□□ -1.67
HMGB1P21-201ENST00000502313 RPS6KA2Q15349 733 aa4.62□□□□□ -1.67
HMGB1P21-201ENST00000502313 NFIL3Q16649 462 aa4.62□□□□□ -1.67
HMGB1P21-201ENST00000502313 TRIM71Q2Q1W2 868 aaKnown RBP4.62□□□□□ -1.67
HMGB1P21-201ENST00000502313 WSCD2Q2TBF2 565 aa4.62□□□□□ -1.67
HMGB1P21-201ENST00000502313 CR1LQ2VPA4 569 aa4.62□□□□□ -1.67
HMGB1P21-201ENST00000502313 ANKDD1AQ495B1 522 aa4.62□□□□□ -1.67
HMGB1P21-201ENST00000502313 ZNF805Q5CZA5 627 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms