RNA–Protein interactions for RNA: ENST00000501122.2

NEAT1-202, nuclear paraspeckle assembly transcript 1, humanhuman

BASIC

Gene NEAT1, Length 22,743 nt, Biotype lincRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEAT1-202ENST00000501122 EDC3Q96F86 508 aaKnown RBP4.9□□□□□ -1.62
NEAT1-202ENST00000501122 OTUB1Q96FW1 271 aaPredicted RBP4.9□□□□□ -1.62
NEAT1-202ENST00000501122 CLCA2Q9UQC9 943 aa4.9□□□□□ -1.62
NEAT1-202ENST00000501122 A6NHS1 94 aa4.9□□□□□ -1.62
NEAT1-202ENST00000501122 PDIA3P30101 505 aaKnown RBP4.9□□□□□ -1.62
NEAT1-202ENST00000501122 UGT2B15P54855 530 aa4.9□□□□□ -1.62
NEAT1-202ENST00000501122 RDM1Q8NG50 284 aa4.9□□□□□ -1.62
NEAT1-202ENST00000501122 AENQ8WTP8 325 aaKnown RBP4.9□□□□□ -1.62
NEAT1-202ENST00000501122 BTBD9Q96Q07 612 aa4.9□□□□□ -1.62
NEAT1-202ENST00000501122 ADAM33Q9BZ11 813 aa4.9□□□□□ -1.62
NEAT1-202ENST00000501122 KLF15Q9UIH9 416 aa4.9□□□□□ -1.62
NEAT1-202ENST00000501122 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP4.9□□□□□ -1.621e-15■□□□□ 10
NEAT1-202ENST00000501122 DGKIO75912 1065 aa4.9□□□□□ -1.62
NEAT1-202ENST00000501122 H6PDO95479 791 aa4.9□□□□□ -1.62
NEAT1-202ENST00000501122 MAB21L1Q13394 359 aa4.9□□□□□ -1.62
NEAT1-202ENST00000501122 SLC9C2Q5TAH2 1124 aa4.9□□□□□ -1.62
NEAT1-202ENST00000501122 DPY19L3Q6ZPD9 716 aa4.9□□□□□ -1.62
NEAT1-202ENST00000501122 ZNF767PQ75MW2 155 aa4.9□□□□□ -1.62
NEAT1-202ENST00000501122 H3BSA7 217 aa4.9□□□□□ -1.62
NEAT1-202ENST00000501122 VPS25Q9BRG1 176 aa4.9□□□□□ -1.62
NEAT1-202ENST00000501122 DGCR6LQ9BY27 220 aa4.9□□□□□ -1.62
NEAT1-202ENST00000501122 TXNL1O43396 289 aa4.9□□□□□ -1.62
NEAT1-202ENST00000501122 KELP23276 732 aa4.9□□□□□ -1.62
NEAT1-202ENST00000501122 MGAT5Q09328 741 aa4.9□□□□□ -1.62
NEAT1-202ENST00000501122 CAMK1Q14012 370 aa4.9□□□□□ -1.62
NEAT1-202ENST00000501122 SKIV2LQ15477 1246 aaKnown RBP4.9□□□□□ -1.62
NEAT1-202ENST00000501122 STRA8Q7Z7C7 330 aa4.9□□□□□ -1.62
NEAT1-202ENST00000501122 APOL6Q9BWW8 343 aa4.9□□□□□ -1.62
NEAT1-202ENST00000501122 MSH6P52701 1360 aa4.9□□□□□ -1.62
NEAT1-202ENST00000501122 DENND3A2RUS2 1198 aa4.9□□□□□ -1.62
NEAT1-202ENST00000501122 FCER2P06734 321 aa4.9□□□□□ -1.62
NEAT1-202ENST00000501122 NOMO2Q5JPE7 1267 aa4.9□□□□□ -1.62
NEAT1-202ENST00000501122 PRRG3Q9BZD7 231 aa4.9□□□□□ -1.62
NEAT1-202ENST00000501122 FOXRED2Q8IWF2 684 aa4.9□□□□□ -1.62
NEAT1-202ENST00000501122 MALT1Q9UDY8 824 aa4.9□□□□□ -1.62
NEAT1-202ENST00000501122 PVALBP20472 110 aaPredicted RBP4.9□□□□□ -1.63
NEAT1-202ENST00000501122 TXKP42681 527 aa4.9□□□□□ -1.63
NEAT1-202ENST00000501122 MAZP56270 477 aaKnown RBP4.9□□□□□ -1.63
NEAT1-202ENST00000501122 KLHL26Q53HC5 615 aa4.9□□□□□ -1.63
NEAT1-202ENST00000501122 UPF1Q92900 1129 aaKnown RBP eCLIP4.9□□□□□ -1.632e-44■■□□□ 12.6
NEAT1-202ENST00000501122 ZNF233A6NK53 670 aa4.9□□□□□ -1.63
NEAT1-202ENST00000501122 SEC23AQ15436 765 aa4.9□□□□□ -1.63
NEAT1-202ENST00000501122 FAM91A1Q658Y4 838 aa4.9□□□□□ -1.63
NEAT1-202ENST00000501122 CNSTQ6PJW8 725 aa4.9□□□□□ -1.63
NEAT1-202ENST00000501122 DGKHQ86XP1 1220 aa4.9□□□□□ -1.63
NEAT1-202ENST00000501122 RRNAD1Q96FB5 475 aaKnown RBP4.9□□□□□ -1.63
NEAT1-202ENST00000501122 PCDHB13Q9Y5F0 798 aa4.9□□□□□ -1.63
NEAT1-202ENST00000501122 PCDHGB3Q9Y5G1 929 aa4.9□□□□□ -1.63
NEAT1-202ENST00000501122 TFPTP0C1Z6 253 aa4.9□□□□□ -1.63
NEAT1-202ENST00000501122 TKTL1P51854 596 aa4.9□□□□□ -1.63
NEAT1-202ENST00000501122 SLC18A2Q05940 514 aa4.9□□□□□ -1.63
NEAT1-202ENST00000501122 SCN1BQ07699 218 aa4.9□□□□□ -1.63
NEAT1-202ENST00000501122 C3orf62Q6ZUJ4 267 aa4.9□□□□□ -1.63
NEAT1-202ENST00000501122 FBXO33Q7Z6M2 555 aa4.9□□□□□ -1.63
NEAT1-202ENST00000501122 CNOT7Q9UIV1 285 aaKnown RBP4.9□□□□□ -1.63
NEAT1-202ENST00000501122 PRR12Q9ULL5 1215 aa4.9□□□□□ -1.63
NEAT1-202ENST00000501122 INSRP06213 1382 aa4.9□□□□□ -1.63
NEAT1-202ENST00000501122 GSC2O15499 205 aa4.9□□□□□ -1.63
NEAT1-202ENST00000501122 FBXO21O94952 628 aa4.9□□□□□ -1.63
NEAT1-202ENST00000501122 FDFT1P37268 417 aa4.9□□□□□ -1.63
NEAT1-202ENST00000501122 ENTPD1P49961 510 aa4.9□□□□□ -1.63
NEAT1-202ENST00000501122 ADAM15Q13444 863 aa4.9□□□□□ -1.63
NEAT1-202ENST00000501122 PSD2Q9BQI7 771 aa4.9□□□□□ -1.63
NEAT1-202ENST00000501122 TMEM120AQ9BXJ8 343 aa4.9□□□□□ -1.63
NEAT1-202ENST00000501122 PSMC3IPQ9P2W1 217 aaPredicted RBP4.9□□□□□ -1.63
NEAT1-202ENST00000501122 EIF3KQ9UBQ5 218 aaKnown RBP4.9□□□□□ -1.63
NEAT1-202ENST00000501122 CUX2O14529 1486 aa4.9□□□□□ -1.63
NEAT1-202ENST00000501122 PMPCBO75439 489 aa4.9□□□□□ -1.63
NEAT1-202ENST00000501122 RBP1P09455 135 aa4.9□□□□□ -1.63
NEAT1-202ENST00000501122 PDGFRBP09619 1106 aa4.9□□□□□ -1.63
NEAT1-202ENST00000501122 DGKQP52824 942 aa4.9□□□□□ -1.63
NEAT1-202ENST00000501122 NCALDP61601 193 aa4.9□□□□□ -1.63
NEAT1-202ENST00000501122 KHDC1Q4VXA5 237 aaKnown RBP4.9□□□□□ -1.63
NEAT1-202ENST00000501122 MSANTD1Q6ZTZ1 278 aa4.9□□□□□ -1.63
NEAT1-202ENST00000501122 ZBTB46Q86UZ6 589 aa4.9□□□□□ -1.63
NEAT1-202ENST00000501122 LINC00301Q8NCQ3 95 aa4.9□□□□□ -1.63
NEAT1-202ENST00000501122 ZNF333Q96JL9 665 aa4.9□□□□□ -1.63
NEAT1-202ENST00000501122 GFOD1Q9NXC2 390 aa4.9□□□□□ -1.63
NEAT1-202ENST00000501122 TTC26A0AVF1 554 aa4.9□□□□□ -1.63
NEAT1-202ENST00000501122 LGALS16A8MUM7 142 aa4.9□□□□□ -1.63
NEAT1-202ENST00000501122 FPGTO14772 594 aa4.9□□□□□ -1.63
NEAT1-202ENST00000501122 CD83Q01151 205 aa4.9□□□□□ -1.63
NEAT1-202ENST00000501122 AP3B2Q13367 1082 aa4.9□□□□□ -1.63
NEAT1-202ENST00000501122 FAM13CQ8NE31 585 aa4.9□□□□□ -1.63
NEAT1-202ENST00000501122 DEDD2Q8WXF8 326 aa4.9□□□□□ -1.63
NEAT1-202ENST00000501122 NDFIP2Q9NV92 336 aa4.9□□□□□ -1.63
NEAT1-202ENST00000501122 FAM86C1Q9NVL1 165 aa4.9□□□□□ -1.63
NEAT1-202ENST00000501122 SNX9Q9Y5X1 595 aa4.9□□□□□ -1.63
NEAT1-202ENST00000501122 UMODL1Q5DID0 1318 aa4.9□□□□□ -1.63
NEAT1-202ENST00000501122 C21orf62-AS1Q17RA5 79 aa4.9□□□□□ -1.63
NEAT1-202ENST00000501122 OR5T1Q8NG75 326 aa4.9□□□□□ -1.63
NEAT1-202ENST00000501122 L3MBTL3Q96JM7 780 aaPredicted RBP4.9□□□□□ -1.63
NEAT1-202ENST00000501122 COMMD9Q9P000 198 aa4.9□□□□□ -1.63
NEAT1-202ENST00000501122 TEX33O43247 280 aa4.9□□□□□ -1.63
NEAT1-202ENST00000501122 HMGCRP04035 888 aa4.9□□□□□ -1.63
NEAT1-202ENST00000501122 USP11P51784 963 aa4.9□□□□□ -1.63
NEAT1-202ENST00000501122 FKBP3Q00688 224 aaKnown RBP4.9□□□□□ -1.63
NEAT1-202ENST00000501122 FASTKD1Q53R41 847 aaKnown RBP4.9□□□□□ -1.63
NEAT1-202ENST00000501122 ZNF852Q6ZMS4 543 aa4.9□□□□□ -1.63
NEAT1-202ENST00000501122 TMEM17Q86X19 198 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms