RNA–Protein interactions for RNA: ENST00000498711.1

CLTC-209, Transcript of clathrin heavy chain, humanhuman

TSL 1 (best)

Gene CLTC, Length 2,941 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-209ENST00000498711 ETV3P41162 512 aa4.1□□□□□ -1.75
CLTC-209ENST00000498711 ECI1P42126 302 aa4.1□□□□□ -1.75
CLTC-209ENST00000498711 KCNJ1P48048 391 aa4.1□□□□□ -1.75
CLTC-209ENST00000498711 INHBEP58166 350 aa4.1□□□□□ -1.75
CLTC-209ENST00000498711 MAP2K1Q02750 393 aaPredicted RBP4.1□□□□□ -1.75
CLTC-209ENST00000498711 SOX4Q06945 474 aaPredicted RBP4.1□□□□□ -1.75
CLTC-209ENST00000498711 CETN1Q12798 172 aa4.1□□□□□ -1.75
CLTC-209ENST00000498711 MESDQ14696 234 aa4.1□□□□□ -1.75
CLTC-209ENST00000498711 KRT72Q14CN4 511 aa4.1□□□□□ -1.75
CLTC-209ENST00000498711 E2F5Q15329 346 aa4.1□□□□□ -1.75
CLTC-209ENST00000498711 DLGAP5Q15398 846 aa4.1□□□□□ -1.75
CLTC-209ENST00000498711 CEP55Q53EZ4 464 aa4.1□□□□□ -1.75
CLTC-209ENST00000498711 ANKRD20A2Q5SQ80 823 aa4.1□□□□□ -1.75
CLTC-209ENST00000498711 ANKRD20A1Q5TYW2 823 aa4.1□□□□□ -1.75
CLTC-209ENST00000498711 LRCH2Q5VUJ6 765 aa4.1□□□□□ -1.75
CLTC-209ENST00000498711 ANKRD20A3Q5VUR7 823 aa4.1□□□□□ -1.75
CLTC-209ENST00000498711 ANO7Q6IWH7 933 aa4.1□□□□□ -1.75
CLTC-209ENST00000498711 C11orf96Q7Z7L8 435 aa4.1□□□□□ -1.75
CLTC-209ENST00000498711 CEP57Q86XR8 500 aa4.1□□□□□ -1.75
CLTC-209ENST00000498711 C4orf19Q8IY42 314 aa4.1□□□□□ -1.75
CLTC-209ENST00000498711 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP4.1□□□□□ -1.75
CLTC-209ENST00000498711 CCDC105Q8IYK2 499 aa4.1□□□□□ -1.75
CLTC-209ENST00000498711 SPICE1Q8N0Z3 855 aa4.1□□□□□ -1.75
CLTC-209ENST00000498711 ANKRD35Q8N283 1001 aa4.1□□□□□ -1.75
CLTC-209ENST00000498711 DDX51Q8N8A6 666 aaKnown RBP eCLIP4.1□□□□□ -1.75
CLTC-209ENST00000498711 EXD1Q8NHP7 514 aa4.1□□□□□ -1.75
CLTC-209ENST00000498711 KAT5Q92993 513 aa4.1□□□□□ -1.75
CLTC-209ENST00000498711 TEKT1Q969V4 418 aa4.1□□□□□ -1.75
CLTC-209ENST00000498711 KLHL29Q96CT2 875 aa4.1□□□□□ -1.75
CLTC-209ENST00000498711 PTCD3Q96EY7 689 aaKnown RBP4.1□□□□□ -1.75
CLTC-209ENST00000498711 TTC25Q96NG3 672 aa4.1□□□□□ -1.75
CLTC-209ENST00000498711 TUBB6Q9BUF5 446 aa4.1□□□□□ -1.75
CLTC-209ENST00000498711 TEKT3Q9BXF9 490 aa4.1□□□□□ -1.75
CLTC-209ENST00000498711 ANKEF1Q9NU02 776 aa4.1□□□□□ -1.75
CLTC-209ENST00000498711 DDX43Q9NXZ2 648 aaKnown RBP4.1□□□□□ -1.75
CLTC-209ENST00000498711 NKX1-2Q9UD57 310 aaPredicted RBP4.1□□□□□ -1.75
CLTC-209ENST00000498711 GRID1Q9ULK0 1009 aa4.1□□□□□ -1.75
CLTC-209ENST00000498711 TBC1D30Q9Y2I9 924 aa4.1□□□□□ -1.75
CLTC-209ENST00000498711 TMX2Q9Y320 296 aa4.1□□□□□ -1.75
CLTC-209ENST00000498711 L3MBTL1Q9Y468 752 aa4.1□□□□□ -1.75
CLTC-209ENST00000498711 KRBA1A5PL33 1030 aa4.1□□□□□ -1.75
CLTC-209ENST00000498711 FAM47DPA6NHR8 397 aa4.1□□□□□ -1.75
CLTC-209ENST00000498711 A8MUI8 341 aa4.1□□□□□ -1.75
CLTC-209ENST00000498711 CLDN3O15551 220 aa4.1□□□□□ -1.75
CLTC-209ENST00000498711 AHCYL1O43865 530 aa4.1□□□□□ -1.75
CLTC-209ENST00000498711 LMNAP02545 664 aaKnown RBP4.1□□□□□ -1.75
CLTC-209ENST00000498711 POLR2MP0CAP2 368 aa4.1□□□□□ -1.75
CLTC-209ENST00000498711 BRAFP15056 766 aa4.1□□□□□ -1.75
CLTC-209ENST00000498711 GM2AP17900 193 aa4.1□□□□□ -1.75
CLTC-209ENST00000498711 ATP6V1C1P21283 382 aa4.1□□□□□ -1.75
CLTC-209ENST00000498711 PTPN4P29074 926 aa4.1□□□□□ -1.75
CLTC-209ENST00000498711 ADCYAP1R1P41586 468 aa4.1□□□□□ -1.75
CLTC-209ENST00000498711 ASPAP45381 313 aa4.1□□□□□ -1.75
CLTC-209ENST00000498711 RARRES1P49788 294 aa4.1□□□□□ -1.75
CLTC-209ENST00000498711 CYP2J2P51589 502 aa4.1□□□□□ -1.75
CLTC-209ENST00000498711 IL9RQ01113 521 aa4.1□□□□□ -1.75
CLTC-209ENST00000498711 DSG1Q02413 1049 aa4.1□□□□□ -1.75
CLTC-209ENST00000498711 FAPQ12884 760 aa4.1□□□□□ -1.75
CLTC-209ENST00000498711 MYO1EQ12965 1108 aa4.1□□□□□ -1.75
CLTC-209ENST00000498711 CALCOCO2Q13137 446 aa4.1□□□□□ -1.75
CLTC-209ENST00000498711 PICALMQ13492 652 aa4.1□□□□□ -1.75
CLTC-209ENST00000498711 KYNUQ16719 465 aa4.1□□□□□ -1.75
CLTC-209ENST00000498711 ARHGAP44Q17R89 818 aa4.1□□□□□ -1.75
CLTC-209ENST00000498711 ABCB5Q2M3G0 1257 aa4.1□□□□□ -1.75
CLTC-209ENST00000498711 SHROOM1Q2M3G4 852 aaPredicted RBP4.1□□□□□ -1.75
CLTC-209ENST00000498711 CCDC38Q502W7 563 aa4.1□□□□□ -1.75
CLTC-209ENST00000498711 DACT2Q5SW24 774 aa4.1□□□□□ -1.75
CLTC-209ENST00000498711 STRIP1Q5VSL9 837 aa4.1□□□□□ -1.75
CLTC-209ENST00000498711 KRT39Q6A163 491 aa4.1□□□□□ -1.75
CLTC-209ENST00000498711 LETMD1Q6P1Q0 360 aa4.1□□□□□ -1.75
CLTC-209ENST00000498711 SLC39A4Q6P5W5 647 aa4.1□□□□□ -1.75
CLTC-209ENST00000498711 ABHD17CQ6PCB6 329 aa4.1□□□□□ -1.75
CLTC-209ENST00000498711 TRIM72Q6ZMU5 477 aa4.1□□□□□ -1.75
CLTC-209ENST00000498711 SLC47A2Q86VL8 602 aa4.1□□□□□ -1.75
CLTC-209ENST00000498711 APOBEC3FQ8IUX4 373 aaKnown RBP4.1□□□□□ -1.75
CLTC-209ENST00000498711 TPH2Q8IWU9 490 aa4.1□□□□□ -1.75
CLTC-209ENST00000498711 RDM1Q8NG50 284 aa4.1□□□□□ -1.75
CLTC-209ENST00000498711 NKD2Q969F2 451 aaPredicted RBP4.1□□□□□ -1.75
CLTC-209ENST00000498711 NAF1Q96HR8 494 aaKnown RBP4.1□□□□□ -1.75
CLTC-209ENST00000498711 TGS1Q96RS0 853 aaKnown RBP4.1□□□□□ -1.75
CLTC-209ENST00000498711 ZFYVE21Q9BQ24 234 aa4.1□□□□□ -1.75
CLTC-209ENST00000498711 PLVAPQ9BX97 442 aa4.1□□□□□ -1.75
CLTC-209ENST00000498711 FRMD8P1Q9BZ68 369 aaPredicted RBP4.1□□□□□ -1.75
CLTC-209ENST00000498711 TRIM6Q9C030 488 aaPredicted RBP4.1□□□□□ -1.75
CLTC-209ENST00000498711 MAF1Q9H063 256 aa4.1□□□□□ -1.75
CLTC-209ENST00000498711 ZHX3Q9H4I2 956 aa4.1□□□□□ -1.75
CLTC-209ENST00000498711 AGO4Q9HCK5 861 aaKnown RBP4.1□□□□□ -1.75
CLTC-209ENST00000498711 ANKFY1Q9P2R3 1169 aa4.1□□□□□ -1.75
CLTC-209ENST00000498711 IP6K2Q9UHH9 426 aa4.1□□□□□ -1.75
CLTC-209ENST00000498711 ANAPC5Q9UJX4 755 aa4.1□□□□□ -1.75
CLTC-209ENST00000498711 PCOLCE2Q9UKZ9 415 aa4.1□□□□□ -1.75
CLTC-209ENST00000498711 R3HDM2Q9Y2K5 976 aaKnown RBP4.1□□□□□ -1.75
CLTC-209ENST00000498711 CBX4O00257 560 aa4.09□□□□□ -1.75
CLTC-209ENST00000498711 CYP26A1O43174 497 aa4.09□□□□□ -1.75
CLTC-209ENST00000498711 LIASO43766 372 aa4.09□□□□□ -1.75
CLTC-209ENST00000498711 DIAPH2O60879 1101 aa4.09□□□□□ -1.75
CLTC-209ENST00000498711 CSDE1O75534 798 aaKnown RBP4.09□□□□□ -1.75
CLTC-209ENST00000498711 DCTN3O75935 186 aa4.09□□□□□ -1.75
CLTC-209ENST00000498711 FKBP9O95302 570 aa4.09□□□□□ -1.75
CLTC-209ENST00000498711 WISP1O95388 367 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms