RNA–Protein interactions for RNA: ENST00000498463.5

SNX13-212, Transcript of sorting nexin 13, humanhuman

TSL 3

Gene SNX13, Length 687 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-212ENST00000498463 SH2D7A6NKC9 451 aaPredicted RBP8.99□□□□□ -0.97
SNX13-212ENST00000498463 FAM90A22PA8MWA6 464 aa8.99□□□□□ -0.97
SNX13-212ENST00000498463 FAM90A12PA8MX19 464 aa8.99□□□□□ -0.97
SNX13-212ENST00000498463 FAM90A23PA8MXZ1 464 aa8.99□□□□□ -0.97
SNX13-212ENST00000498463 M0QZQ0 153 aa8.99□□□□□ -0.97
SNX13-212ENST00000498463 CDC14BO60729 498 aa8.99□□□□□ -0.97
SNX13-212ENST00000498463 TNNT1P13805 278 aa8.99□□□□□ -0.97
SNX13-212ENST00000498463 GPD2P43304 727 aa8.99□□□□□ -0.97
SNX13-212ENST00000498463 TIRAPP58753 221 aa8.99□□□□□ -0.97
SNX13-212ENST00000498463 METTL24Q5JXM2 366 aa8.99□□□□□ -0.97
SNX13-212ENST00000498463 FAM102AQ5T9C2 384 aaPredicted RBP8.99□□□□□ -0.97
SNX13-212ENST00000498463 CARFQ8N187 725 aa8.99□□□□□ -0.97
SNX13-212ENST00000498463 OR56A1Q8NGH5 318 aa8.99□□□□□ -0.97
SNX13-212ENST00000498463 OSCP1Q8WVF1 389 aa8.99□□□□□ -0.97
SNX13-212ENST00000498463 FAM168AQ92567 244 aa8.99□□□□□ -0.97
SNX13-212ENST00000498463 NPIPB3Q92617 1050 aa8.99□□□□□ -0.97
SNX13-212ENST00000498463 MASTLQ96GX5 879 aa8.99□□□□□ -0.97
SNX13-212ENST00000498463 TMEM176AQ96HP8 235 aa8.99□□□□□ -0.97
SNX13-212ENST00000498463 ERVK-5Q9HDB9 667 aa8.99□□□□□ -0.97
SNX13-212ENST00000498463 TLR8Q9NR97 1041 aaKnown RBP8.99□□□□□ -0.97
SNX13-212ENST00000498463 DRG1Q9Y295 367 aaKnown RBP8.99□□□□□ -0.97
SNX13-212ENST00000498463 SPATA31A3Q5VYP0 1347 aa8.99□□□□□ -0.97
SNX13-212ENST00000498463 TGFB1I1O43294 461 aa8.98□□□□□ -0.97
SNX13-212ENST00000498463 ERAL1O75616 437 aaKnown RBP8.98□□□□□ -0.97
SNX13-212ENST00000498463 BEST1O76090 585 aa8.98□□□□□ -0.97
SNX13-212ENST00000498463 IPO13O94829 963 aaKnown RBP8.98□□□□□ -0.97
SNX13-212ENST00000498463 HLA-DOAP06340 250 aa8.98□□□□□ -0.97
SNX13-212ENST00000498463 BSGP35613 385 aa8.98□□□□□ -0.97
SNX13-212ENST00000498463 RPL15P61313 204 aaKnown RBP8.98□□□□□ -0.97
SNX13-212ENST00000498463 KRT83P78385 493 aa8.98□□□□□ -0.97
SNX13-212ENST00000498463 HSD11B2P80365 405 aa8.98□□□□□ -0.97
SNX13-212ENST00000498463 PRPF39Q86UA1 669 aaKnown RBP8.98□□□□□ -0.97
SNX13-212ENST00000498463 VSIG1Q86XK7 387 aa8.98□□□□□ -0.97
SNX13-212ENST00000498463 MB21D1Q8N884 522 aa8.98□□□□□ -0.97
SNX13-212ENST00000498463 MDGA1Q8NFP4 955 aa8.98□□□□□ -0.97
SNX13-212ENST00000498463 RFWD2Q8NHY2 731 aa8.98□□□□□ -0.97
SNX13-212ENST00000498463 OVCA2Q8WZ82 227 aa8.98□□□□□ -0.97
SNX13-212ENST00000498463 ATP6V1E2Q96A05 226 aa8.98□□□□□ -0.97
SNX13-212ENST00000498463 ARRDC3Q96B67 414 aa8.98□□□□□ -0.97
SNX13-212ENST00000498463 SH3KBP1Q96B97 665 aa8.98□□□□□ -0.97
SNX13-212ENST00000498463 KIF1BPQ96EK5 621 aa8.98□□□□□ -0.97
SNX13-212ENST00000498463 FAR2Q96K12 515 aa8.98□□□□□ -0.97
SNX13-212ENST00000498463 HCFC1R1Q9NWW0 138 aa8.98□□□□□ -0.97
SNX13-212ENST00000498463 ENTPD2Q9Y5L3 495 aa8.98□□□□□ -0.97
SNX13-212ENST00000498463 TBC1D3DA0A087WVF3 549 aa8.97□□□□□ -0.97
SNX13-212ENST00000498463 TBC1D3IA0A087WXS9 549 aa8.97□□□□□ -0.97
SNX13-212ENST00000498463 TBC1D3EA0A087X179 549 aa8.97□□□□□ -0.97
SNX13-212ENST00000498463 TBC1D3KA0A087X1G2 549 aa8.97□□□□□ -0.97
SNX13-212ENST00000498463 A0A1B0GTL3 188 aa8.97□□□□□ -0.97
SNX13-212ENST00000498463 A0A1B0GTW7 788 aa8.97□□□□□ -0.97
SNX13-212ENST00000498463 TBC1D3BA6NDS4 549 aa8.97□□□□□ -0.97
SNX13-212ENST00000498463 TBC1D3FA6NER0 549 aaPredicted RBP8.97□□□□□ -0.97
SNX13-212ENST00000498463 TBC1D3LB9A6J9 549 aa8.97□□□□□ -0.97
SNX13-212ENST00000498463 TBC1D3HP0C7X1 549 aa8.97□□□□□ -0.97
SNX13-212ENST00000498463 TMEM225BP0DP42 221 aa8.97□□□□□ -0.97
SNX13-212ENST00000498463 NR2F1P10589 423 aa8.97□□□□□ -0.97
SNX13-212ENST00000498463 PEPDP12955 493 aa8.97□□□□□ -0.97
SNX13-212ENST00000498463 CR2P20023 1033 aa8.97□□□□□ -0.97
SNX13-212ENST00000498463 FGFR4P22455 802 aa8.97□□□□□ -0.97
SNX13-212ENST00000498463 CTNNA1P35221 906 aaKnown RBP8.97□□□□□ -0.97
SNX13-212ENST00000498463 NNMTP40261 264 aa8.97□□□□□ -0.97
SNX13-212ENST00000498463 RCAN1P53805 252 aa8.97□□□□□ -0.97
SNX13-212ENST00000498463 EIF4A1P60842 406 aaKnown RBP8.97□□□□□ -0.97
SNX13-212ENST00000498463 EPS8Q12929 822 aa8.97□□□□□ -0.97
SNX13-212ENST00000498463 SEMA3BQ13214 749 aa8.97□□□□□ -0.97
SNX13-212ENST00000498463 BFSP2Q13515 415 aa8.97□□□□□ -0.97
SNX13-212ENST00000498463 ELAVL1Q15717 326 aaKnown RBP8.97□□□□□ -0.97
SNX13-212ENST00000498463 LY6KQ17RY6 165 aa8.97□□□□□ -0.97
SNX13-212ENST00000498463 PREPLQ4J6C6 727 aaPredicted RBP8.97□□□□□ -0.97
SNX13-212ENST00000498463 AASDHQ4L235 1098 aaPredicted RBP8.97□□□□□ -0.97
SNX13-212ENST00000498463 TBC1D3GQ6DHY5 549 aa8.97□□□□□ -0.97
SNX13-212ENST00000498463 TBC1D3CQ6IPX1 549 aa8.97□□□□□ -0.97
SNX13-212ENST00000498463 CLNKQ7Z7G1 428 aa8.97□□□□□ -0.97
SNX13-212ENST00000498463 ADGRG6Q86SQ4 1221 aa8.97□□□□□ -0.97
SNX13-212ENST00000498463 RAB11FIP4Q86YS3 637 aa8.97□□□□□ -0.97
SNX13-212ENST00000498463 IZUMO1Q8IYV9 350 aa8.97□□□□□ -0.97
SNX13-212ENST00000498463 TBC1D3Q8IZP1 549 aaPredicted RBP8.97□□□□□ -0.97
SNX13-212ENST00000498463 TAGAPQ8N103 731 aa8.97□□□□□ -0.97
SNX13-212ENST00000498463 FAM109AQ8N4B1 249 aa8.97□□□□□ -0.97
SNX13-212ENST00000498463 SUPT20HQ8NEM7 779 aa8.97□□□□□ -0.97
SNX13-212ENST00000498463 RUFY2Q8WXA3 655 aa8.97□□□□□ -0.97
SNX13-212ENST00000498463 ATG4AQ8WYN0 398 aa8.97□□□□□ -0.97
SNX13-212ENST00000498463 ZSWIM1Q9BR11 485 aa8.97□□□□□ -0.97
SNX13-212ENST00000498463 FTOQ9C0B1 505 aaKnown RBP eCLIP8.97□□□□□ -0.97
SNX13-212ENST00000498463 CLPBQ9H078 707 aa8.97□□□□□ -0.97
SNX13-212ENST00000498463 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.97□□□□□ -0.97
SNX13-212ENST00000498463 HECAQ9UBI9 543 aaPredicted RBP8.97□□□□□ -0.97
SNX13-212ENST00000498463 ZHX1Q9UKY1 873 aaPredicted RBP8.97□□□□□ -0.97
SNX13-212ENST00000498463 GAGE10A6NGK3 116 aa8.96□□□□□ -0.98
SNX13-212ENST00000498463 NKX2-8O15522 239 aa8.96□□□□□ -0.98
SNX13-212ENST00000498463 B4GALT4O60513 344 aa8.96□□□□□ -0.98
SNX13-212ENST00000498463 IRAK1P51617 712 aa8.96□□□□□ -0.98
SNX13-212ENST00000498463 CDH15P55291 814 aa8.96□□□□□ -0.98
SNX13-212ENST00000498463 NHLH2Q02577 135 aa8.96□□□□□ -0.98
SNX13-212ENST00000498463 STK4Q13043 487 aa8.96□□□□□ -0.98
SNX13-212ENST00000498463 ZNF766Q5HY98 468 aa8.96□□□□□ -0.98
SNX13-212ENST00000498463 HECTD3Q5T447 861 aa8.96□□□□□ -0.98
SNX13-212ENST00000498463 SLC9A4Q6AI14 798 aa8.96□□□□□ -0.98
SNX13-212ENST00000498463 TEX11Q8IYF3 940 aa8.96□□□□□ -0.98
SNX13-212ENST00000498463 ADGRG5Q8IZF4 528 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms