RNA–Protein interactions for RNA: ENST00000498325.5

HMGXB4-208, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-208ENST00000498325 GTF2F1P35269 517 aaKnown RBP eCLIP5.66□□□□□ -1.5
HMGXB4-208ENST00000498325 SOX5P35711 763 aa5.66□□□□□ -1.5
HMGXB4-208ENST00000498325 PRKCIP41743 596 aa5.66□□□□□ -1.5
HMGXB4-208ENST00000498325 ACOT2P49753 483 aa5.66□□□□□ -1.5
HMGXB4-208ENST00000498325 GPC3P51654 580 aa5.66□□□□□ -1.5
HMGXB4-208ENST00000498325 KIF11P52732 1056 aa5.66□□□□□ -1.5
HMGXB4-208ENST00000498325 NLRP11P59045 1033 aaKnown RBP5.66□□□□□ -1.5
HMGXB4-208ENST00000498325 NKX3-2P78367 333 aa5.66□□□□□ -1.5
HMGXB4-208ENST00000498325 BEX3Q00994 111 aa5.66□□□□□ -1.5
HMGXB4-208ENST00000498325 MBTD1Q05BQ5 628 aa5.66□□□□□ -1.5
HMGXB4-208ENST00000498325 MCL1Q07820 350 aa5.66□□□□□ -1.5
HMGXB4-208ENST00000498325 PPP3CAQ08209 521 aa5.66□□□□□ -1.5
HMGXB4-208ENST00000498325 KIF5AQ12840 1032 aa5.66□□□□□ -1.5
HMGXB4-208ENST00000498325 BIRC3Q13489 604 aa5.66□□□□□ -1.5
HMGXB4-208ENST00000498325 CAMK2GQ13555 558 aaPredicted RBP5.66□□□□□ -1.5
HMGXB4-208ENST00000498325 ARHGAP44Q17R89 818 aa5.66□□□□□ -1.5
HMGXB4-208ENST00000498325 ZNF568Q3ZCX4 644 aa5.66□□□□□ -1.5
HMGXB4-208ENST00000498325 MARCH8Q5T0T0 291 aa5.66□□□□□ -1.5
HMGXB4-208ENST00000498325 ATF7IP2Q5U623 682 aa5.66□□□□□ -1.5
HMGXB4-208ENST00000498325 IQCEQ6IPM2 695 aa5.66□□□□□ -1.5
HMGXB4-208ENST00000498325 CRELD2Q6UXH1 353 aaPredicted RBP5.66□□□□□ -1.5
HMGXB4-208ENST00000498325 ENOSF1Q7L5Y1 443 aa5.66□□□□□ -1.5
HMGXB4-208ENST00000498325 IRF2BP2Q7Z5L9 587 aa5.66□□□□□ -1.5
HMGXB4-208ENST00000498325 RSPH3Q86UC2 560 aa5.66□□□□□ -1.5
HMGXB4-208ENST00000498325 BRSK2Q8IWQ3 736 aa5.66□□□□□ -1.5
HMGXB4-208ENST00000498325 KIAA0319LQ8IZA0 1049 aa5.66□□□□□ -1.5
HMGXB4-208ENST00000498325 PCSK9Q8NBP7 692 aaKnown RBP5.66□□□□□ -1.5
HMGXB4-208ENST00000498325 ACRBPQ8NEB7 543 aa5.66□□□□□ -1.5
HMGXB4-208ENST00000498325 ZSWIM2Q8NEG5 633 aa5.66□□□□□ -1.5
HMGXB4-208ENST00000498325 MYRIPQ8NFW9 859 aa5.66□□□□□ -1.5
HMGXB4-208ENST00000498325 LMO3Q8TAP4 145 aa5.66□□□□□ -1.5
HMGXB4-208ENST00000498325 PLEKHO2Q8TD55 490 aa5.66□□□□□ -1.5
HMGXB4-208ENST00000498325 LMBR1Q8WVP7 490 aa5.66□□□□□ -1.5
HMGXB4-208ENST00000498325 KAT2BQ92831 832 aa5.66□□□□□ -1.5
HMGXB4-208ENST00000498325 NKD2Q969F2 451 aaPredicted RBP5.66□□□□□ -1.5
HMGXB4-208ENST00000498325 NT5C1BQ96P26 610 aa5.66□□□□□ -1.5
HMGXB4-208ENST00000498325 RBM15Q96T37 977 aaKnown RBP eCLIP5.66□□□□□ -1.5
HMGXB4-208ENST00000498325 CGRRF1Q99675 332 aa5.66□□□□□ -1.5
HMGXB4-208ENST00000498325 DESI2Q9BSY9 194 aa5.66□□□□□ -1.5
HMGXB4-208ENST00000498325 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP5.66□□□□□ -1.5
HMGXB4-208ENST00000498325 TSGA10Q9BZW7 698 aa5.66□□□□□ -1.5
HMGXB4-208ENST00000498325 PRDM14Q9GZV8 571 aa5.66□□□□□ -1.5
HMGXB4-208ENST00000498325 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.66□□□□□ -1.5
HMGXB4-208ENST00000498325 UPF3AQ9H1J1 476 aaKnown RBP5.66□□□□□ -1.5
HMGXB4-208ENST00000498325 WNT8AQ9H1J5 351 aa5.66□□□□□ -1.5
HMGXB4-208ENST00000498325 IFT122Q9HBG6 1241 aa5.66□□□□□ -1.5
HMGXB4-208ENST00000498325 UBE2TQ9NPD8 197 aaPredicted RBP5.66□□□□□ -1.5
HMGXB4-208ENST00000498325 ARHGAP20Q9P2F6 1191 aa5.66□□□□□ -1.5
HMGXB4-208ENST00000498325 ANKFY1Q9P2R3 1169 aa5.66□□□□□ -1.5
HMGXB4-208ENST00000498325 MYO1AQ9UBC5 1043 aa5.66□□□□□ -1.5
HMGXB4-208ENST00000498325 POLR3KQ9Y2Y1 108 aaPredicted RBP5.66□□□□□ -1.5
HMGXB4-208ENST00000498325 FHOD1Q9Y613 1164 aa5.66□□□□□ -1.5
HMGXB4-208ENST00000498325 COL4A4P53420 1690 aaPredicted RBP5.66□□□□□ -1.5
HMGXB4-208ENST00000498325 DMXL1Q9Y485 3027 aa5.65□□□□□ -1.5
HMGXB4-208ENST00000498325 ACACBO00763 2458 aa5.65□□□□□ -1.5
HMGXB4-208ENST00000498325 MBLAC1A4D2B0 266 aaPredicted RBP5.65□□□□□ -1.5
HMGXB4-208ENST00000498325 M0QZ92 97 aa5.65□□□□□ -1.5
HMGXB4-208ENST00000498325 CABYRO75952 493 aa5.65□□□□□ -1.5
HMGXB4-208ENST00000498325 PDGFBP01127 241 aaPredicted RBP5.65□□□□□ -1.5
HMGXB4-208ENST00000498325 CD4P01730 458 aa5.65□□□□□ -1.5
HMGXB4-208ENST00000498325 TNNC2P02585 160 aa5.65□□□□□ -1.5
HMGXB4-208ENST00000498325 C4BPAP04003 597 aaKnown RBP5.65□□□□□ -1.5
HMGXB4-208ENST00000498325 VTNP04004 478 aa5.65□□□□□ -1.5
HMGXB4-208ENST00000498325 CLTAP09496 248 aa5.65□□□□□ -1.5
HMGXB4-208ENST00000498325 ATF2P15336 505 aa5.65□□□□□ -1.5
HMGXB4-208ENST00000498325 ZNF20P17024 532 aa5.65□□□□□ -1.5
HMGXB4-208ENST00000498325 TNFAIP3P21580 790 aa5.65□□□□□ -1.5
HMGXB4-208ENST00000498325 PROZP22891 400 aa5.65□□□□□ -1.5
HMGXB4-208ENST00000498325 AXLP30530 894 aa5.65□□□□□ -1.5
HMGXB4-208ENST00000498325 CASQ1P31415 396 aa5.65□□□□□ -1.5
HMGXB4-208ENST00000498325 GDF5P43026 501 aa5.65□□□□□ -1.5
HMGXB4-208ENST00000498325 VAV2P52735 878 aa5.65□□□□□ -1.5
HMGXB4-208ENST00000498325 CRYBB1P53674 252 aaPredicted RBP5.65□□□□□ -1.5
HMGXB4-208ENST00000498325 JAM2P57087 298 aa5.65□□□□□ -1.5
HMGXB4-208ENST00000498325 BPIFB4P59827 614 aa5.65□□□□□ -1.5
HMGXB4-208ENST00000498325 GNG11P61952 73 aa5.65□□□□□ -1.5
HMGXB4-208ENST00000498325 PURAQ00577 322 aaKnown RBP5.65□□□□□ -1.5
HMGXB4-208ENST00000498325 LMNB2Q03252 620 aa5.65□□□□□ -1.5
HMGXB4-208ENST00000498325 ARID5AQ03989 594 aa5.65□□□□□ -1.5
HMGXB4-208ENST00000498325 TUBB2AQ13885 445 aa5.65□□□□□ -1.5
HMGXB4-208ENST00000498325 BMS1Q14692 1282 aaKnown RBP5.65□□□□□ -1.5
HMGXB4-208ENST00000498325 DRAP1Q14919 205 aaPredicted RBP5.65□□□□□ -1.5
HMGXB4-208ENST00000498325 SLC18A3Q16572 532 aa5.65□□□□□ -1.5
HMGXB4-208ENST00000498325 DCAF4L1Q3SXM0 396 aa5.65□□□□□ -1.5
HMGXB4-208ENST00000498325 C1orf220Q5T0J3 134 aa5.65□□□□□ -1.5
HMGXB4-208ENST00000498325 CCDC122Q5T0U0 273 aa5.65□□□□□ -1.5
HMGXB4-208ENST00000498325 DPY19L2P1Q6NXN4 242 aa5.65□□□□□ -1.5
HMGXB4-208ENST00000498325 TAF2Q6P1X5 1199 aa5.65□□□□□ -1.5
HMGXB4-208ENST00000498325 SYT10Q6XYQ8 523 aa5.65□□□□□ -1.5
HMGXB4-208ENST00000498325 CATSPER4Q7RTX7 472 aa5.65□□□□□ -1.5
HMGXB4-208ENST00000498325 WDR49Q8IV35 697 aa5.65□□□□□ -1.5
HMGXB4-208ENST00000498325 CD302Q8IX05 232 aa5.65□□□□□ -1.5
HMGXB4-208ENST00000498325 THNSL1Q8IYQ7 743 aa5.65□□□□□ -1.5
HMGXB4-208ENST00000498325 KIAA2013Q8IYS2 634 aa5.65□□□□□ -1.5
HMGXB4-208ENST00000498325 PPM1KQ8N3J5 372 aa5.65□□□□□ -1.5
HMGXB4-208ENST00000498325 KLHDC9Q8NEP7 349 aa5.65□□□□□ -1.5
HMGXB4-208ENST00000498325 JAKMIP2Q96AA8 810 aa5.65□□□□□ -1.5
HMGXB4-208ENST00000498325 SCLYQ96I15 445 aa5.65□□□□□ -1.5
HMGXB4-208ENST00000498325 ANKRD36BP1Q96IX9 119 aa5.65□□□□□ -1.5
HMGXB4-208ENST00000498325 ZNF668Q96K58 619 aaPredicted RBP5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms