RNA–Protein interactions for RNA: ENST00000498043.6

CHRNA4-206, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 5

Gene CHRNA4, Length 2,052 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-206ENST00000498043 GBE1Q04446 702 aa18.46■□□□□ 0.55
CHRNA4-206ENST00000498043 BTG3Q14201 252 aaPredicted RBP18.46■□□□□ 0.55
CHRNA4-206ENST00000498043 PSMD5Q16401 504 aa18.46■□□□□ 0.55
CHRNA4-206ENST00000498043 RHBDF2Q6PJF5 856 aa18.46■□□□□ 0.55
CHRNA4-206ENST00000498043 OTOP2Q7RTS6 562 aa18.46■□□□□ 0.55
CHRNA4-206ENST00000498043 CCDC33Q8N5R6 958 aa18.46■□□□□ 0.55
CHRNA4-206ENST00000498043 FBXO22Q8NEZ5 403 aa18.46■□□□□ 0.55
CHRNA4-206ENST00000498043 SPPL2BQ8TCT7 592 aa18.46■□□□□ 0.55
CHRNA4-206ENST00000498043 LRRN4Q8WUT4 740 aa18.46■□□□□ 0.55
CHRNA4-206ENST00000498043 NTAN1Q96AB6 310 aa18.46■□□□□ 0.55
CHRNA4-206ENST00000498043 SLC9A7Q96T83 725 aa18.46■□□□□ 0.55
CHRNA4-206ENST00000498043 ABCC13Q9NSE7 274 aa18.46■□□□□ 0.55
CHRNA4-206ENST00000498043 ETNK2Q9NVF9 386 aa18.46■□□□□ 0.55
CHRNA4-206ENST00000498043 FBXW11Q9UKB1 542 aa18.46■□□□□ 0.55
CHRNA4-206ENST00000498043 NUDT5Q9UKK9 219 aa18.46■□□□□ 0.55
CHRNA4-206ENST00000498043 H3BRJ5 948 aa18.45■□□□□ 0.54
CHRNA4-206ENST00000498043 SYF2O95926 243 aaKnown RBP18.45■□□□□ 0.54
CHRNA4-206ENST00000498043 EFEMP2O95967 443 aa18.45■□□□□ 0.54
CHRNA4-206ENST00000498043 CHKAP35790 457 aa18.45■□□□□ 0.54
CHRNA4-206ENST00000498043 MTMR3Q13615 1198 aa18.45■□□□□ 0.54
CHRNA4-206ENST00000498043 NCBP2-AS2Q69YL0 99 aa18.45■□□□□ 0.54
CHRNA4-206ENST00000498043 KIAA1841Q6NSI8 718 aa18.45■□□□□ 0.54
CHRNA4-206ENST00000498043 IQCKQ8N0W5 287 aa18.45■□□□□ 0.54
CHRNA4-206ENST00000498043 ZNF558Q96NG5 402 aa18.45■□□□□ 0.54
CHRNA4-206ENST00000498043 MED4Q9NPJ6 270 aa18.45■□□□□ 0.54
CHRNA4-206ENST00000498043 ARHGEF4Q9NR80 690 aa18.45■□□□□ 0.54
CHRNA4-206ENST00000498043 DNAJC17Q9NVM6 304 aaKnown RBP18.45■□□□□ 0.54
CHRNA4-206ENST00000498043 RCOR3Q9P2K3 495 aaPredicted RBP18.45■□□□□ 0.54
CHRNA4-206ENST00000498043 MRPL42Q9Y6G3 142 aaKnown RBP18.45■□□□□ 0.54
CHRNA4-206ENST00000498043 FAM72CH0Y354 149 aa18.45■□□□□ 0.54
CHRNA4-206ENST00000498043 DNALI1O14645 258 aaPredicted RBP18.45■□□□□ 0.54
CHRNA4-206ENST00000498043 MSI1O43347 362 aaKnown RBP18.45■□□□□ 0.54
CHRNA4-206ENST00000498043 F9P00740 461 aa18.45■□□□□ 0.54
CHRNA4-206ENST00000498043 CXCR3P49682 368 aa18.45■□□□□ 0.54
CHRNA4-206ENST00000498043 PMS2P54278 862 aa18.45■□□□□ 0.54
CHRNA4-206ENST00000498043 AIF1P55008 147 aa18.45■□□□□ 0.54
CHRNA4-206ENST00000498043 SCAPQ12770 1279 aa18.45■□□□□ 0.54
CHRNA4-206ENST00000498043 FAM182AQ5T1J6 154 aa18.45■□□□□ 0.54
CHRNA4-206ENST00000498043 FAM72AQ5TYM5 149 aa18.45■□□□□ 0.54
CHRNA4-206ENST00000498043 FAM72DQ6L9T8 149 aa18.45■□□□□ 0.54
CHRNA4-206ENST00000498043 FAM72BQ86X60 149 aa18.45■□□□□ 0.54
CHRNA4-206ENST00000498043 RNF168Q8IYW5 571 aaPredicted RBP18.45■□□□□ 0.54
CHRNA4-206ENST00000498043 TAB3Q8N5C8 712 aaPredicted RBP18.45■□□□□ 0.54
CHRNA4-206ENST00000498043 BBOF1Q8ND07 529 aa18.45■□□□□ 0.54
CHRNA4-206ENST00000498043 RNF34Q969K3 372 aa18.45■□□□□ 0.54
CHRNA4-206ENST00000498043 PWWP2AQ96N64 755 aa18.45■□□□□ 0.54
CHRNA4-206ENST00000498043 TKTL2Q9H0I9 626 aa18.45■□□□□ 0.54
CHRNA4-206ENST00000498043 FBXO44Q9H4M3 255 aa18.45■□□□□ 0.54
CHRNA4-206ENST00000498043 WDCPQ9H6R7 721 aa18.45■□□□□ 0.54
CHRNA4-206ENST00000498043 OSER1Q9NX31 292 aa18.45■□□□□ 0.54
CHRNA4-206ENST00000498043 GMIPQ9P107 970 aa18.45■□□□□ 0.54
CHRNA4-206ENST00000498043 MTRRQ9UBK8 725 aa18.45■□□□□ 0.54
CHRNA4-206ENST00000498043 SFMBT1Q9UHJ3 866 aa18.45■□□□□ 0.54
CHRNA4-206ENST00000498043 SCML2Q9UQR0 700 aa18.45■□□□□ 0.54
CHRNA4-206ENST00000498043 WDR27A2RRH5 827 aa18.44■□□□□ 0.54
CHRNA4-206ENST00000498043 EEF2KO00418 725 aaKnown RBP18.44■□□□□ 0.54
CHRNA4-206ENST00000498043 POLR3GO15318 223 aaPredicted RBP18.44■□□□□ 0.54
CHRNA4-206ENST00000498043 ZFXP17010 805 aaPredicted RBP18.44■□□□□ 0.54
CHRNA4-206ENST00000498043 DUSP4Q13115 394 aa18.44■□□□□ 0.54
CHRNA4-206ENST00000498043 ARL13BQ3SXY8 428 aa18.44■□□□□ 0.54
CHRNA4-206ENST00000498043 DENND5BQ6ZUT9 1274 aa18.44■□□□□ 0.54
CHRNA4-206ENST00000498043 BEND5Q7L4P6 421 aa18.44■□□□□ 0.54
CHRNA4-206ENST00000498043 OR2W6PQ8NHA6 318 aa18.44■□□□□ 0.54
CHRNA4-206ENST00000498043 ADAM7Q9H2U9 754 aa18.44■□□□□ 0.54
CHRNA4-206ENST00000498043 SMOC2Q9H3U7 446 aa18.44■□□□□ 0.54
CHRNA4-206ENST00000498043 GREB1Q4ZG55 1949 aa18.44■□□□□ 0.54
CHRNA4-206ENST00000498043 IRAK2O43187 625 aa18.43■□□□□ 0.54
CHRNA4-206ENST00000498043 EFCAB14O75071 495 aa18.43■□□□□ 0.54
CHRNA4-206ENST00000498043 IGLV3-25P01717 112 aa18.43■□□□□ 0.54
CHRNA4-206ENST00000498043 CAV1Q03135 178 aa18.43■□□□□ 0.54
CHRNA4-206ENST00000498043 SLC10A2Q12908 348 aaPredicted RBP18.43■□□□□ 0.54
CHRNA4-206ENST00000498043 UBAP2Q5T6F2 1119 aaKnown RBP18.43■□□□□ 0.54
CHRNA4-206ENST00000498043 HIBCHQ6NVY1 386 aaPredicted RBP18.43■□□□□ 0.54
CHRNA4-206ENST00000498043 RFX8Q6ZV50 586 aa18.43■□□□□ 0.54
CHRNA4-206ENST00000498043 SLC39A11Q8N1S5 342 aa18.43■□□□□ 0.54
CHRNA4-206ENST00000498043 CASP10Q92851 521 aa18.43■□□□□ 0.54
CHRNA4-206ENST00000498043 TMEM169Q96HH4 297 aa18.43■□□□□ 0.54
CHRNA4-206ENST00000498043 YME1L1Q96TA2 773 aa18.43■□□□□ 0.54
CHRNA4-206ENST00000498043 OXCT2Q9BYC2 517 aaPredicted RBP18.43■□□□□ 0.54
CHRNA4-206ENST00000498043 AAASQ9NRG9 546 aa18.43■□□□□ 0.54
CHRNA4-206ENST00000498043 SNX10Q9Y5X0 201 aa18.43■□□□□ 0.54
CHRNA4-206ENST00000498043 ALPK3Q96L96 1907 aa18.43■□□□□ 0.54
CHRNA4-206ENST00000498043 ZBBXA8MT70 800 aa18.43■□□□□ 0.54
CHRNA4-206ENST00000498043 MFSD11O43934 449 aa18.43■□□□□ 0.54
CHRNA4-206ENST00000498043 HAPLN1P10915 354 aaPredicted RBP18.43■□□□□ 0.54
CHRNA4-206ENST00000498043 OR1D2P34982 312 aa18.43■□□□□ 0.54
CHRNA4-206ENST00000498043 SLC8B1Q6J4K2 584 aa18.43■□□□□ 0.54
CHRNA4-206ENST00000498043 CMTR2Q8IYT2 770 aaKnown RBP18.43■□□□□ 0.54
CHRNA4-206ENST00000498043 NETO2Q8NC67 525 aa18.43■□□□□ 0.54
CHRNA4-206ENST00000498043 IL23AQ9NPF7 189 aa18.43■□□□□ 0.54
CHRNA4-206ENST00000498043 KCNN4O15554 427 aa18.42■□□□□ 0.54
CHRNA4-206ENST00000498043 BAIAP3O94812 1187 aa18.42■□□□□ 0.54
CHRNA4-206ENST00000498043 SOD2P04179 222 aa18.42■□□□□ 0.54
CHRNA4-206ENST00000498043 EN2P19622 333 aaPredicted RBP18.42■□□□□ 0.54
CHRNA4-206ENST00000498043 RBL1P28749 1068 aa18.42■□□□□ 0.54
CHRNA4-206ENST00000498043 RPL22P35268 128 aaKnown RBP18.42■□□□□ 0.54
CHRNA4-206ENST00000498043 TPI1P60174 286 aa18.42■□□□□ 0.54
CHRNA4-206ENST00000498043 SMARCB1Q12824 385 aa18.42■□□□□ 0.54
CHRNA4-206ENST00000498043 SEMA3BQ13214 749 aa18.42■□□□□ 0.54
CHRNA4-206ENST00000498043 DPYSQ14117 519 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms