RNA–Protein interactions for RNA: ENST00000497978.1

NUDCD3-211, Transcript of NudC domain containing 3, humanhuman

TSL 4

Gene NUDCD3, Length 659 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-211ENST00000497978 ACOX2Q99424 681 aa12.32□□□□□ -0.44
NUDCD3-211ENST00000497978 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.32□□□□□ -0.44
NUDCD3-211ENST00000497978 FBXO10Q9UK96 956 aa12.32□□□□□ -0.44
NUDCD3-211ENST00000497978 TSPAN16Q9UKR8 245 aa12.32□□□□□ -0.44
NUDCD3-211ENST00000497978 AGO1Q9UL18 857 aaKnown RBP12.32□□□□□ -0.44
NUDCD3-211ENST00000497978 HCN2Q9UL51 889 aa12.32□□□□□ -0.44
NUDCD3-211ENST00000497978 KIAA1257Q9ULG3 409 aa12.32□□□□□ -0.44
NUDCD3-211ENST00000497978 SLC27A6Q9Y2P4 619 aa12.32□□□□□ -0.44
NUDCD3-211ENST00000497978 TRIM49BA6NDI0 452 aa12.31□□□□□ -0.44
NUDCD3-211ENST00000497978 NDUFS2O75306 463 aa12.31□□□□□ -0.44
NUDCD3-211ENST00000497978 PENKP01210 267 aaPredicted RBP12.31□□□□□ -0.44
NUDCD3-211ENST00000497978 CFIP05156 583 aa12.31□□□□□ -0.44
NUDCD3-211ENST00000497978 VDRP11473 427 aa12.31□□□□□ -0.44
NUDCD3-211ENST00000497978 NDUFV2P19404 249 aa12.31□□□□□ -0.44
NUDCD3-211ENST00000497978 ITPKAP23677 461 aa12.31□□□□□ -0.44
NUDCD3-211ENST00000497978 PMLP29590 882 aa12.31□□□□□ -0.44
NUDCD3-211ENST00000497978 HARS2P49590 506 aaKnown RBP12.31□□□□□ -0.44
NUDCD3-211ENST00000497978 ZNF132P52740 706 aa12.31□□□□□ -0.44
NUDCD3-211ENST00000497978 PMS1P54277 932 aaKnown RBP12.31□□□□□ -0.44
NUDCD3-211ENST00000497978 PDE4CQ08493 712 aa12.31□□□□□ -0.44
NUDCD3-211ENST00000497978 CETN1Q12798 172 aa12.31□□□□□ -0.44
NUDCD3-211ENST00000497978 LRMPQ12912 555 aa12.31□□□□□ -0.44
NUDCD3-211ENST00000497978 DUOXA1Q1HG43 343 aa12.31□□□□□ -0.44
NUDCD3-211ENST00000497978 UAP1L1Q3KQV9 507 aa12.31□□□□□ -0.44
NUDCD3-211ENST00000497978 CCDC40Q4G0X9 1142 aa12.31□□□□□ -0.44
NUDCD3-211ENST00000497978 FYB2Q5VWT5 728 aa12.31□□□□□ -0.44
NUDCD3-211ENST00000497978 SLC23A3Q6PIS1 610 aa12.31□□□□□ -0.44
NUDCD3-211ENST00000497978 SIX6OS1Q8N1H7 587 aa12.31□□□□□ -0.44
NUDCD3-211ENST00000497978 CPXM2Q8N436 756 aa12.31□□□□□ -0.44
NUDCD3-211ENST00000497978 DDI1Q8WTU0 396 aa12.31□□□□□ -0.44
NUDCD3-211ENST00000497978 ERCC4Q92889 916 aaPredicted RBP12.31□□□□□ -0.44
NUDCD3-211ENST00000497978 SLC35C1Q96A29 364 aa12.31□□□□□ -0.44
NUDCD3-211ENST00000497978 DHTKD1Q96HY7 919 aaPredicted RBP12.31□□□□□ -0.44
NUDCD3-211ENST00000497978 CEP63Q96MT8 703 aa12.31□□□□□ -0.44
NUDCD3-211ENST00000497978 ULBP1Q9BZM6 244 aa12.31□□□□□ -0.44
NUDCD3-211ENST00000497978 CACNA2D2Q9NY47 1150 aa12.31□□□□□ -0.44
NUDCD3-211ENST00000497978 PILRBQ9UKJ0 227 aa12.31□□□□□ -0.44
NUDCD3-211ENST00000497978 RAD54BQ9Y620 910 aa12.31□□□□□ -0.44
NUDCD3-211ENST00000497978 STON1Q9Y6Q2 735 aa12.31□□□□□ -0.44
NUDCD3-211ENST00000497978 CNOT1A5YKK6 2376 aaKnown RBP12.31□□□□□ -0.44
NUDCD3-211ENST00000497978 IGHV1OR15-9A0A0B4J2B8 117 aa12.3□□□□□ -0.44
NUDCD3-211ENST00000497978 CDX4O14627 284 aaPredicted RBP12.3□□□□□ -0.44
NUDCD3-211ENST00000497978 SETSIPP0DME0 302 aa12.3□□□□□ -0.44
NUDCD3-211ENST00000497978 CSRP1P21291 193 aaKnown RBP12.3□□□□□ -0.44
NUDCD3-211ENST00000497978 MAPK8P45983 427 aa12.3□□□□□ -0.44
NUDCD3-211ENST00000497978 FMO5P49326 533 aa12.3□□□□□ -0.44
NUDCD3-211ENST00000497978 ATXN3P54252 364 aaPredicted RBP12.3□□□□□ -0.44
NUDCD3-211ENST00000497978 MFAP3P55082 362 aa12.3□□□□□ -0.44
NUDCD3-211ENST00000497978 SHC2P98077 582 aa12.3□□□□□ -0.44
NUDCD3-211ENST00000497978 ARID5AQ03989 594 aa12.3□□□□□ -0.44
NUDCD3-211ENST00000497978 GFPT1Q06210 699 aaPredicted RBP12.3□□□□□ -0.44
NUDCD3-211ENST00000497978 ZNF33AQ06730 810 aa12.3□□□□□ -0.44
NUDCD3-211ENST00000497978 ADIGQ0VDE8 80 aa12.3□□□□□ -0.44
NUDCD3-211ENST00000497978 SH3PXD2AQ5TCZ1 1133 aa12.3□□□□□ -0.44
NUDCD3-211ENST00000497978 KIAA1211LQ6NV74 962 aa12.3□□□□□ -0.44
NUDCD3-211ENST00000497978 KIAA1324Q6UXG2 1013 aaKnown RBP12.3□□□□□ -0.44
NUDCD3-211ENST00000497978 ANKS1BQ7Z6G8 1248 aa12.3□□□□□ -0.44
NUDCD3-211ENST00000497978 FMNL3Q8IVF7 1028 aa12.3□□□□□ -0.44
NUDCD3-211ENST00000497978 ELOA2Q8IYF1 753 aaPredicted RBP12.3□□□□□ -0.44
NUDCD3-211ENST00000497978 DEFB119Q8N690 84 aa12.3□□□□□ -0.44
NUDCD3-211ENST00000497978 UBA3Q8TBC4 463 aa12.3□□□□□ -0.44
NUDCD3-211ENST00000497978 ERLEC1Q96DZ1 483 aa12.3□□□□□ -0.44
NUDCD3-211ENST00000497978 MRGPRX1Q96LB2 322 aa12.3□□□□□ -0.44
NUDCD3-211ENST00000497978 NT5C1BQ96P26 610 aa12.3□□□□□ -0.44
NUDCD3-211ENST00000497978 SLC2A11Q9BYW1 496 aa12.3□□□□□ -0.44
NUDCD3-211ENST00000497978 TMEM74BQ9NUR3 256 aa12.3□□□□□ -0.44
NUDCD3-211ENST00000497978 SLC6A14Q9UN76 642 aa12.3□□□□□ -0.44
NUDCD3-211ENST00000497978 CYP8B1Q9UNU6 501 aa12.3□□□□□ -0.44
NUDCD3-211ENST00000497978 HBS1LQ9Y450 684 aaKnown RBP12.3□□□□□ -0.44
NUDCD3-211ENST00000497978 ATXN2Q99700 1313 aaKnown RBP12.3□□□□□ -0.44
NUDCD3-211ENST00000497978 TNRC6BQ9UPQ9 1833 aaKnown RBP12.3□□□□□ -0.44
NUDCD3-211ENST00000497978 CEP192Q8TEP8 1941 aa12.29□□□□□ -0.44
NUDCD3-211ENST00000497978 BICDL2A1A5D9 508 aa12.29□□□□□ -0.44
NUDCD3-211ENST00000497978 TULP2O00295 520 aa12.29□□□□□ -0.44
NUDCD3-211ENST00000497978 PMM2O15305 246 aa12.29□□□□□ -0.44
NUDCD3-211ENST00000497978 TIMM44O43615 452 aa12.29□□□□□ -0.44
NUDCD3-211ENST00000497978 SYNCRIPO60506 623 aaKnown RBP12.29□□□□□ -0.44
NUDCD3-211ENST00000497978 SERPINF2P08697 491 aa12.29□□□□□ -0.44
NUDCD3-211ENST00000497978 PAEPP09466 180 aa12.29□□□□□ -0.44
NUDCD3-211ENST00000497978 CEACAM1P13688 526 aa12.29□□□□□ -0.44
NUDCD3-211ENST00000497978 ENGP17813 658 aa12.29□□□□□ -0.44
NUDCD3-211ENST00000497978 ZNF445P59923 1031 aa12.29□□□□□ -0.44
NUDCD3-211ENST00000497978 EIF4HQ15056 248 aaKnown RBP12.29□□□□□ -0.44
NUDCD3-211ENST00000497978 TRIP4Q15650 581 aaPredicted RBP12.29□□□□□ -0.44
NUDCD3-211ENST00000497978 ST3GAL2Q16842 350 aa12.29□□□□□ -0.44
NUDCD3-211ENST00000497978 GEN1Q17RS7 908 aa12.29□□□□□ -0.44
NUDCD3-211ENST00000497978 MPPE1Q53F39 396 aa12.29□□□□□ -0.44
NUDCD3-211ENST00000497978 SYCP2LQ5T4T6 812 aa12.29□□□□□ -0.44
NUDCD3-211ENST00000497978 PEAR1Q5VY43 1037 aaPredicted RBP12.29□□□□□ -0.44
NUDCD3-211ENST00000497978 BSPRYQ5W0U4 402 aa12.29□□□□□ -0.44
NUDCD3-211ENST00000497978 ISM2Q6H9L7 571 aa12.29□□□□□ -0.44
NUDCD3-211ENST00000497978 TMEM270Q6UE05 265 aa12.29□□□□□ -0.44
NUDCD3-211ENST00000497978 SCML4Q8N228 414 aa12.29□□□□□ -0.44
NUDCD3-211ENST00000497978 KCTD13Q8WZ19 329 aa12.29□□□□□ -0.44
NUDCD3-211ENST00000497978 NDRG1Q92597 394 aaKnown RBP12.29□□□□□ -0.44
NUDCD3-211ENST00000497978 SLC32A1Q9H598 525 aa12.29□□□□□ -0.44
NUDCD3-211ENST00000497978 PRDM16Q9HAZ2 1276 aa12.29□□□□□ -0.44
NUDCD3-211ENST00000497978 CD248Q9HCU0 757 aa12.29□□□□□ -0.44
NUDCD3-211ENST00000497978 CNGB3Q9NQW8 809 aa12.29□□□□□ -0.44
NUDCD3-211ENST00000497978 ABCC13Q9NSE7 274 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms