RNA–Protein interactions for RNA: ENST00000497722.2

PSPC1-205, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 448 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-205ENST00000497722 CINPQ9BW66 212 aaPredicted RBP3.79□□□□□ -1.8
PSPC1-205ENST00000497722 STK33Q9BYT3 514 aa3.79□□□□□ -1.8
PSPC1-205ENST00000497722 AS3MTQ9HBK9 375 aa3.79□□□□□ -1.8
PSPC1-205ENST00000497722 TRIM36Q9NQ86 728 aa3.79□□□□□ -1.8
PSPC1-205ENST00000497722 HELLSQ9NRZ9 838 aa3.79□□□□□ -1.8
PSPC1-205ENST00000497722 ELOVL5Q9NYP7 299 aa3.79□□□□□ -1.8
PSPC1-205ENST00000497722 RIMKLBQ9ULI2 386 aa3.79□□□□□ -1.8
PSPC1-205ENST00000497722 CAPN11Q9UMQ6 739 aa3.79□□□□□ -1.8
PSPC1-205ENST00000497722 VPS4AQ9UN37 437 aa3.79□□□□□ -1.8
PSPC1-205ENST00000497722 A0A087WV62 115 aa3.78□□□□□ -1.8
PSPC1-205ENST00000497722 LOC105378220A0A1B0GUY1 285 aaPredicted RBP3.78□□□□□ -1.8
PSPC1-205ENST00000497722 BTBD19C9JJ37 291 aa3.78□□□□□ -1.8
PSPC1-205ENST00000497722 UBE2Q2LH0YL09 131 aa3.78□□□□□ -1.8
PSPC1-205ENST00000497722 M0R3H8 397 aa3.78□□□□□ -1.8
PSPC1-205ENST00000497722 SPRY2O43597 315 aa3.78□□□□□ -1.8
PSPC1-205ENST00000497722 PLA2G6O60733 806 aa3.78□□□□□ -1.8
PSPC1-205ENST00000497722 NTN1O95631 604 aa3.78□□□□□ -1.8
PSPC1-205ENST00000497722 APEHP13798 732 aaKnown RBP3.78□□□□□ -1.8
PSPC1-205ENST00000497722 GABRB3P28472 473 aa3.78□□□□□ -1.8
PSPC1-205ENST00000497722 DGKQP52824 942 aa3.78□□□□□ -1.8
PSPC1-205ENST00000497722 FOXG1P55316 489 aaPredicted RBP3.78□□□□□ -1.8
PSPC1-205ENST00000497722 CBFBQ13951 182 aa3.78□□□□□ -1.8
PSPC1-205ENST00000497722 CSHL1Q14406 222 aa3.78□□□□□ -1.8
PSPC1-205ENST00000497722 CLCA4Q14CN2 919 aa3.78□□□□□ -1.8
PSPC1-205ENST00000497722 PUM3Q15397 648 aaKnown RBP3.78□□□□□ -1.8
PSPC1-205ENST00000497722 FAM187BQ17R55 369 aa3.78□□□□□ -1.8
PSPC1-205ENST00000497722 SLC5A9Q2M3M2 681 aa3.78□□□□□ -1.8
PSPC1-205ENST00000497722 Q4G0T1 1027 aa3.78□□□□□ -1.8
PSPC1-205ENST00000497722 CC2D1BQ5T0F9 858 aaKnown RBP3.78□□□□□ -1.8
PSPC1-205ENST00000497722 ANO1Q5XXA6 986 aa3.78□□□□□ -1.8
PSPC1-205ENST00000497722 AWAT2Q6E213 333 aa3.78□□□□□ -1.8
PSPC1-205ENST00000497722 TMEM65Q6PI78 240 aa3.78□□□□□ -1.8
PSPC1-205ENST00000497722 CCDC117Q8IWD4 279 aaPredicted RBP3.78□□□□□ -1.8
PSPC1-205ENST00000497722 ADAMTS18Q8TE60 1221 aa3.78□□□□□ -1.8
PSPC1-205ENST00000497722 WDR60Q8WVS4 1066 aa3.78□□□□□ -1.8
PSPC1-205ENST00000497722 WASF1Q92558 559 aa3.78□□□□□ -1.8
PSPC1-205ENST00000497722 ZDHHC12Q96GR4 267 aa3.78□□□□□ -1.8
PSPC1-205ENST00000497722 WDYHV1Q96HA8 205 aa3.78□□□□□ -1.8
PSPC1-205ENST00000497722 KAZALD1Q96I82 304 aa3.78□□□□□ -1.8
PSPC1-205ENST00000497722 CCDC17Q96LX7 622 aa3.78□□□□□ -1.8
PSPC1-205ENST00000497722 MMS19Q96T76 1030 aa3.78□□□□□ -1.8
PSPC1-205ENST00000497722 ARPC5LQ9BPX5 153 aa3.78□□□□□ -1.8
PSPC1-205ENST00000497722 TTLL2Q9BWV7 592 aa3.78□□□□□ -1.8
PSPC1-205ENST00000497722 WDR12Q9GZL7 423 aaKnown RBP3.78□□□□□ -1.8
PSPC1-205ENST00000497722 BRD8Q9H0E9 1235 aa3.78□□□□□ -1.8
PSPC1-205ENST00000497722 NECTIN3Q9NQS3 549 aa3.78□□□□□ -1.8
PSPC1-205ENST00000497722 KLHL13Q9P2N7 655 aa3.78□□□□□ -1.8
PSPC1-205ENST00000497722 LPAR3Q9UBY5 353 aa3.78□□□□□ -1.8
PSPC1-205ENST00000497722 CACNA1IQ9P0X4 2223 aa3.77□□□□□ -1.81
PSPC1-205ENST00000497722 GOLGA6L3A6NEY3 463 aa3.77□□□□□ -1.81
PSPC1-205ENST00000497722 H3BNC9 293 aa3.77□□□□□ -1.81
PSPC1-205ENST00000497722 J3KTA2 159 aa3.77□□□□□ -1.81
PSPC1-205ENST00000497722 AGPSO00116 658 aa3.77□□□□□ -1.81
PSPC1-205ENST00000497722 RNF8O76064 485 aa3.77□□□□□ -1.81
PSPC1-205ENST00000497722 MT-CO3P00414 261 aa3.77□□□□□ -1.81
PSPC1-205ENST00000497722 ADRA1DP25100 572 aa3.77□□□□□ -1.81
PSPC1-205ENST00000497722 MST1P26927 711 aa3.77□□□□□ -1.81
PSPC1-205ENST00000497722 SLC5A2P31639 672 aa3.77□□□□□ -1.81
PSPC1-205ENST00000497722 THBS4P35443 961 aa3.77□□□□□ -1.81
PSPC1-205ENST00000497722 TRAPPC10P48553 1259 aa3.77□□□□□ -1.81
PSPC1-205ENST00000497722 DIO1P49895 249 aa3.77□□□□□ -1.81
PSPC1-205ENST00000497722 RNASELQ05823 741 aaKnown RBP3.77□□□□□ -1.81
PSPC1-205ENST00000497722 CCDC15Q0P6D6 951 aa3.77□□□□□ -1.81
PSPC1-205ENST00000497722 LMAN2Q12907 356 aa3.77□□□□□ -1.81
PSPC1-205ENST00000497722 GRAMD1BQ3KR37 738 aa3.77□□□□□ -1.81
PSPC1-205ENST00000497722 ZNF569Q5MCW4 686 aa3.77□□□□□ -1.81
PSPC1-205ENST00000497722 TMTC4Q5T4D3 741 aa3.77□□□□□ -1.81
PSPC1-205ENST00000497722 ATPAF1Q5TC12 328 aaPredicted RBP3.77□□□□□ -1.81
PSPC1-205ENST00000497722 ABLIM2Q6H8Q1 611 aa3.77□□□□□ -1.81
PSPC1-205ENST00000497722 RINT1Q6NUQ1 792 aa3.77□□□□□ -1.81
PSPC1-205ENST00000497722 KLHL17Q6TDP4 642 aa3.77□□□□□ -1.81
PSPC1-205ENST00000497722 TECPR1Q7Z6L1 1165 aa3.77□□□□□ -1.81
PSPC1-205ENST00000497722 PIP4P1Q86T03 277 aa3.77□□□□□ -1.81
PSPC1-205ENST00000497722 MORC4Q8TE76 937 aa3.77□□□□□ -1.81
PSPC1-205ENST00000497722 PIGOQ8TEQ8 1089 aa3.77□□□□□ -1.81
PSPC1-205ENST00000497722 C18orf8Q96DM3 657 aa3.77□□□□□ -1.81
PSPC1-205ENST00000497722 FYTTD1Q96QD9 318 aaKnown RBP3.77□□□□□ -1.81
PSPC1-205ENST00000497722 OBP2BQ9NPH6 170 aa3.77□□□□□ -1.81
PSPC1-205ENST00000497722 FBXO28Q9NVF7 368 aa3.77□□□□□ -1.81
PSPC1-205ENST00000497722 CA14Q9ULX7 337 aa3.77□□□□□ -1.81
PSPC1-205ENST00000497722 AFG3L2Q9Y4W6 797 aa3.77□□□□□ -1.81
PSPC1-205ENST00000497722 A0A087WZ62 844 aa3.76□□□□□ -1.81
PSPC1-205ENST00000497722 LY6G6EA0A0G2JKS1 128 aa3.76□□□□□ -1.81
PSPC1-205ENST00000497722 AQP12BA6NM10 295 aa3.76□□□□□ -1.81
PSPC1-205ENST00000497722 A8MVJ9 347 aa3.76□□□□□ -1.81
PSPC1-205ENST00000497722 TTC34A8MYJ7 566 aa3.76□□□□□ -1.81
PSPC1-205ENST00000497722 CA12O43570 354 aa3.76□□□□□ -1.81
PSPC1-205ENST00000497722 ASNA1O43681 348 aa3.76□□□□□ -1.81
PSPC1-205ENST00000497722 GLP2RO95838 553 aa3.76□□□□□ -1.81
PSPC1-205ENST00000497722 BMP15O95972 392 aa3.76□□□□□ -1.81
PSPC1-205ENST00000497722 ITGA2BP08514 1039 aa3.76□□□□□ -1.81
PSPC1-205ENST00000497722 CHKAP35790 457 aa3.76□□□□□ -1.81
PSPC1-205ENST00000497722 PBX1P40424 430 aa3.76□□□□□ -1.81
PSPC1-205ENST00000497722 MMP13P45452 471 aa3.76□□□□□ -1.81
PSPC1-205ENST00000497722 SRSF1Q07955 248 aaKnown RBP eCLIP3.76□□□□□ -1.81
PSPC1-205ENST00000497722 SEMA3BQ13214 749 aa3.76□□□□□ -1.81
PSPC1-205ENST00000497722 ATP1A4Q13733 1029 aa3.76□□□□□ -1.81
PSPC1-205ENST00000497722 SPARCL1Q14515 664 aa3.76□□□□□ -1.81
PSPC1-205ENST00000497722 RABEP1Q15276 862 aa3.76□□□□□ -1.81
PSPC1-205ENST00000497722 RPS6KA2Q15349 733 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms