RNA–Protein interactions for RNA: ENST00000496910.1

EXOSC3-208, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 217 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-208ENST00000496910 PA2G4Q9UQ80 394 aaKnown RBP4.05□□□□□ -1.76
EXOSC3-208ENST00000496910 ZNF711Q9Y462 761 aa4.05□□□□□ -1.76
EXOSC3-208ENST00000496910 PIEZO2Q9H5I5 2752 aa4.05□□□□□ -1.76
EXOSC3-208ENST00000496910 AKAP12Q02952 1782 aa4.04□□□□□ -1.76
EXOSC3-208ENST00000496910 SPTAN1Q13813 2472 aaKnown RBP4.04□□□□□ -1.76
EXOSC3-208ENST00000496910 C17orf113A0A1B0GUU1 675 aa4.04□□□□□ -1.76
EXOSC3-208ENST00000496910 A0A1W2PPL8 197 aa4.04□□□□□ -1.76
EXOSC3-208ENST00000496910 KRTAP23-1A1A580 65 aa4.04□□□□□ -1.76
EXOSC3-208ENST00000496910 PRSS29PA6NIE9 313 aa4.04□□□□□ -1.76
EXOSC3-208ENST00000496910 TRIM64CA6NLI5 447 aa4.04□□□□□ -1.76
EXOSC3-208ENST00000496910 RTCAO00442 366 aaKnown RBP4.04□□□□□ -1.76
EXOSC3-208ENST00000496910 HMMRO75330 724 aa4.04□□□□□ -1.76
EXOSC3-208ENST00000496910 GJB3O75712 270 aa4.04□□□□□ -1.76
EXOSC3-208ENST00000496910 NDST3O95803 873 aa4.04□□□□□ -1.76
EXOSC3-208ENST00000496910 MLYCDO95822 493 aa4.04□□□□□ -1.76
EXOSC3-208ENST00000496910 ITGA5P08648 1049 aa4.04□□□□□ -1.76
EXOSC3-208ENST00000496910 MALP21145 153 aa4.04□□□□□ -1.76
EXOSC3-208ENST00000496910 ACO1P21399 889 aaKnown RBP4.04□□□□□ -1.76
EXOSC3-208ENST00000496910 TNNT3P45378 269 aaPredicted RBP4.04□□□□□ -1.76
EXOSC3-208ENST00000496910 SCNN1GP51170 649 aa4.04□□□□□ -1.76
EXOSC3-208ENST00000496910 PNLIPRP1P54315 467 aa4.04□□□□□ -1.76
EXOSC3-208ENST00000496910 VAMP2P63027 116 aa4.04□□□□□ -1.76
EXOSC3-208ENST00000496910 IFI35P80217 286 aaPredicted RBP4.04□□□□□ -1.76
EXOSC3-208ENST00000496910 SNAPC2Q13487 334 aa4.04□□□□□ -1.76
EXOSC3-208ENST00000496910 DCTN1Q14203 1278 aa4.04□□□□□ -1.76
EXOSC3-208ENST00000496910 RAB39AQ14964 217 aa4.04□□□□□ -1.76
EXOSC3-208ENST00000496910 RAB30Q15771 203 aa4.04□□□□□ -1.76
EXOSC3-208ENST00000496910 ADCK5Q3MIX3 580 aa4.04□□□□□ -1.76
EXOSC3-208ENST00000496910 FLYWCH1Q4VC44 716 aa4.04□□□□□ -1.76
EXOSC3-208ENST00000496910 DCAF17Q5H9S7 520 aaPredicted RBP4.04□□□□□ -1.76
EXOSC3-208ENST00000496910 ACAD10Q6JQN1 1059 aa4.04□□□□□ -1.76
EXOSC3-208ENST00000496910 DRICH1Q6PGQ1 229 aaPredicted RBP4.04□□□□□ -1.76
EXOSC3-208ENST00000496910 KDELC2Q7Z4H8 507 aa4.04□□□□□ -1.76
EXOSC3-208ENST00000496910 DNAJB7Q7Z6W7 309 aaPredicted RBP4.04□□□□□ -1.76
EXOSC3-208ENST00000496910 UBE2Q1Q7Z7E8 422 aa4.04□□□□□ -1.76
EXOSC3-208ENST00000496910 TTC7BQ86TV6 843 aa4.04□□□□□ -1.76
EXOSC3-208ENST00000496910 CHD1LQ86WJ1 897 aa4.04□□□□□ -1.76
EXOSC3-208ENST00000496910 IQCA1Q86XH1 822 aa4.04□□□□□ -1.76
EXOSC3-208ENST00000496910 FAM90A1Q86YD7 464 aa4.04□□□□□ -1.76
EXOSC3-208ENST00000496910 CEP57L1Q8IYX8 460 aa4.04□□□□□ -1.76
EXOSC3-208ENST00000496910 TDHQ8IZJ6 230 aa4.04□□□□□ -1.76
EXOSC3-208ENST00000496910 SYNE4Q8N205 404 aa4.04□□□□□ -1.76
EXOSC3-208ENST00000496910 D2HGDHQ8N465 521 aa4.04□□□□□ -1.76
EXOSC3-208ENST00000496910 ARL6IP6Q8N6S5 226 aa4.04□□□□□ -1.76
EXOSC3-208ENST00000496910 FANCBQ8NB91 859 aa4.04□□□□□ -1.76
EXOSC3-208ENST00000496910 CYP2W1Q8TAV3 490 aa4.04□□□□□ -1.76
EXOSC3-208ENST00000496910 ST8SIA2Q92186 375 aa4.04□□□□□ -1.76
EXOSC3-208ENST00000496910 RUBCNQ92622 972 aa4.04□□□□□ -1.76
EXOSC3-208ENST00000496910 MIEF2Q96C03 454 aa4.04□□□□□ -1.76
EXOSC3-208ENST00000496910 NSUN4Q96CB9 384 aaKnown RBP4.04□□□□□ -1.76
EXOSC3-208ENST00000496910 HIC2Q96JB3 615 aa4.04□□□□□ -1.76
EXOSC3-208ENST00000496910 TIGD1Q96MW7 591 aa4.04□□□□□ -1.76
EXOSC3-208ENST00000496910 JAKMIP1Q96N16 626 aaKnown RBP4.04□□□□□ -1.76
EXOSC3-208ENST00000496910 VRK1Q99986 396 aaPredicted RBP4.04□□□□□ -1.76
EXOSC3-208ENST00000496910 MRI1Q9BV20 369 aa4.04□□□□□ -1.76
EXOSC3-208ENST00000496910 ABCG4Q9H172 646 aa4.04□□□□□ -1.76
EXOSC3-208ENST00000496910 TAF1DQ9H5J8 278 aaPredicted RBP4.04□□□□□ -1.76
EXOSC3-208ENST00000496910 FBXO34Q9NWN3 711 aa4.04□□□□□ -1.76
EXOSC3-208ENST00000496910 ZHX1Q9UKY1 873 aaPredicted RBP4.04□□□□□ -1.76
EXOSC3-208ENST00000496910 CNPY2Q9Y2B0 182 aa4.04□□□□□ -1.76
EXOSC3-208ENST00000496910 PCDHGB5Q9Y5G0 923 aa4.04□□□□□ -1.76
EXOSC3-208ENST00000496910 INO80Q9ULG1 1556 aaPredicted RBP4.04□□□□□ -1.76
EXOSC3-208ENST00000496910 NAV3Q8IVL0 2385 aa4.04□□□□□ -1.76
EXOSC3-208ENST00000496910 TEX15Q9BXT5 2789 aa4.03□□□□□ -1.76
EXOSC3-208ENST00000496910 LRPPRCP42704 1394 aaKnown RBP4.03□□□□□ -1.76
EXOSC3-208ENST00000496910 FRYQ5TBA9 3013 aa4.03□□□□□ -1.76
EXOSC3-208ENST00000496910 DICER1Q9UPY3 1922 aaKnown RBP4.03□□□□□ -1.76
EXOSC3-208ENST00000496910 hCG_1807616A0A1W2PRN6 198 aa4.03□□□□□ -1.76
EXOSC3-208ENST00000496910 H3BUI4 141 aa4.03□□□□□ -1.76
EXOSC3-208ENST00000496910 K7ESM1 405 aa4.03□□□□□ -1.76
EXOSC3-208ENST00000496910 F2RL2O00254 374 aa4.03□□□□□ -1.76
EXOSC3-208ENST00000496910 PODXLO00592 558 aa4.03□□□□□ -1.76
EXOSC3-208ENST00000496910 HNRNPDLO14979 420 aaKnown RBP4.03□□□□□ -1.76
EXOSC3-208ENST00000496910 PIP5K1BO14986 540 aa4.03□□□□□ -1.76
EXOSC3-208ENST00000496910 SLC16A6O15403 523 aa4.03□□□□□ -1.76
EXOSC3-208ENST00000496910 HTATSF1O43719 755 aaKnown RBP4.03□□□□□ -1.76
EXOSC3-208ENST00000496910 PGM3O95394 542 aa4.03□□□□□ -1.76
EXOSC3-208ENST00000496910 BAG2O95816 211 aa4.03□□□□□ -1.76
EXOSC3-208ENST00000496910 HNRNPA1P09651 372 aaKnown RBP eCLIP4.03□□□□□ -1.76
EXOSC3-208ENST00000496910 MYL4P12829 197 aa4.03□□□□□ -1.76
EXOSC3-208ENST00000496910 ATP6V1B1P15313 513 aa4.03□□□□□ -1.76
EXOSC3-208ENST00000496910 SELENOPP49908 381 aa4.03□□□□□ -1.76
EXOSC3-208ENST00000496910 PAPOLAP51003 745 aaKnown RBP4.03□□□□□ -1.76
EXOSC3-208ENST00000496910 PRKAA2P54646 552 aa4.03□□□□□ -1.76
EXOSC3-208ENST00000496910 PER3P56645 1201 aa4.03□□□□□ -1.76
EXOSC3-208ENST00000496910 CLRN1P58418 232 aa4.03□□□□□ -1.76
EXOSC3-208ENST00000496910 RPS16P62249 146 aaKnown RBP4.03□□□□□ -1.76
EXOSC3-208ENST00000496910 UBE3AQ05086 875 aa4.03□□□□□ -1.76
EXOSC3-208ENST00000496910 CUL4BQ13620 913 aa4.03□□□□□ -1.76
EXOSC3-208ENST00000496910 SMC1AQ14683 1233 aaKnown RBP4.03□□□□□ -1.76
EXOSC3-208ENST00000496910 KHDC1Q4VXA5 237 aaKnown RBP4.03□□□□□ -1.76
EXOSC3-208ENST00000496910 CCDC158Q5M9N0 1113 aa4.03□□□□□ -1.76
EXOSC3-208ENST00000496910 ZNF362Q5T0B9 420 aaPredicted RBP4.03□□□□□ -1.76
EXOSC3-208ENST00000496910 ANKRD45Q5TZF3 282 aa4.03□□□□□ -1.76
EXOSC3-208ENST00000496910 SNX30Q5VWJ9 437 aa4.03□□□□□ -1.76
EXOSC3-208ENST00000496910 SMIM5Q71RC9 77 aa4.03□□□□□ -1.76
EXOSC3-208ENST00000496910 KRT74Q7RTS7 529 aa4.03□□□□□ -1.76
EXOSC3-208ENST00000496910 FAM83AQ86UY5 434 aa4.03□□□□□ -1.76
EXOSC3-208ENST00000496910 ZFPM1Q8IX07 1006 aa4.03□□□□□ -1.76
EXOSC3-208ENST00000496910 TEX9Q8N6V9 391 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms