RNA–Protein interactions for RNA: ENST00000496723.1

CD46-218, Transcript of CD46 molecule, humanhuman

TSL 5

Gene CD46, Length 661 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-218ENST00000496723 IFIT2P09913 472 aaKnown RBP4.4□□□□□ -1.71
CD46-218ENST00000496723 SRGAP2BP0DMP2 458 aa4.4□□□□□ -1.71
CD46-218ENST00000496723 SNHG28P0DPA3 235 aa4.4□□□□□ -1.71
CD46-218ENST00000496723 ABCB4P21439 1286 aa4.4□□□□□ -1.71
CD46-218ENST00000496723 TKTP29401 623 aaKnown RBP4.4□□□□□ -1.71
CD46-218ENST00000496723 NSUN2Q08J23 767 aaKnown RBP eCLIP4.4□□□□□ -1.71
CD46-218ENST00000496723 SLC14A1Q13336 389 aa4.4□□□□□ -1.71
CD46-218ENST00000496723 ATP1A4Q13733 1029 aa4.4□□□□□ -1.71
CD46-218ENST00000496723 TRIP6Q15654 476 aaKnown RBP4.4□□□□□ -1.71
CD46-218ENST00000496723 TMTC4Q5T4D3 741 aa4.4□□□□□ -1.71
CD46-218ENST00000496723 SLC2A7Q6PXP3 512 aa4.4□□□□□ -1.71
CD46-218ENST00000496723 C16orf71Q8IYS4 520 aaPredicted RBP4.4□□□□□ -1.71
CD46-218ENST00000496723 ACRBPQ8NEB7 543 aa4.4□□□□□ -1.71
CD46-218ENST00000496723 SVIPQ8NHG7 77 aa4.4□□□□□ -1.71
CD46-218ENST00000496723 HIC2Q96JB3 615 aa4.4□□□□□ -1.71
CD46-218ENST00000496723 ELAC2Q9BQ52 826 aaKnown RBP4.4□□□□□ -1.71
CD46-218ENST00000496723 NLRC4Q9NPP4 1024 aa4.4□□□□□ -1.71
CD46-218ENST00000496723 SCAF8Q9UPN6 1271 aaKnown RBP4.4□□□□□ -1.71
CD46-218ENST00000496723 KCNU1A8MYU2 1149 aa4.39□□□□□ -1.71
CD46-218ENST00000496723 DSCR3O14972 297 aa4.39□□□□□ -1.71
CD46-218ENST00000496723 MBPP02686 304 aaPredicted RBP4.39□□□□□ -1.71
CD46-218ENST00000496723 SFPQP23246 707 aaKnown RBP eCLIP4.39□□□□□ -1.71
CD46-218ENST00000496723 GSTM5P46439 218 aa4.39□□□□□ -1.71
CD46-218ENST00000496723 JAK3P52333 1124 aa4.39□□□□□ -1.71
CD46-218ENST00000496723 WDR5P61964 334 aaKnown RBP4.39□□□□□ -1.71
CD46-218ENST00000496723 RAE1P78406 368 aaKnown RBP4.39□□□□□ -1.71
CD46-218ENST00000496723 SEMA3BQ13214 749 aa4.39□□□□□ -1.71
CD46-218ENST00000496723 SEC23BQ15437 767 aa4.39□□□□□ -1.71
CD46-218ENST00000496723 RAB30Q15771 203 aa4.39□□□□□ -1.71
CD46-218ENST00000496723 P3H1Q32P28 736 aa4.39□□□□□ -1.71
CD46-218ENST00000496723 SYCP2LQ5T4T6 812 aa4.39□□□□□ -1.71
CD46-218ENST00000496723 FAM90A2PQ658T7 463 aa4.39□□□□□ -1.71
CD46-218ENST00000496723 TLDC1Q6P9B6 456 aa4.39□□□□□ -1.71
CD46-218ENST00000496723 NOL8Q76FK4 1167 aaKnown RBP4.39□□□□□ -1.71
CD46-218ENST00000496723 RASGRP3Q8IV61 690 aa4.39□□□□□ -1.71
CD46-218ENST00000496723 SAMD14Q8IZD0 417 aaPredicted RBP4.39□□□□□ -1.71
CD46-218ENST00000496723 OSR1Q8TAX0 266 aaPredicted RBP4.39□□□□□ -1.71
CD46-218ENST00000496723 ZNF398Q8TD17 642 aa4.39□□□□□ -1.71
CD46-218ENST00000496723 GJA10Q969M2 543 aa4.39□□□□□ -1.71
CD46-218ENST00000496723 C18orf8Q96DM3 657 aa4.39□□□□□ -1.71
CD46-218ENST00000496723 FAM118BQ9BPY3 351 aa4.39□□□□□ -1.71
CD46-218ENST00000496723 TMEM8AQ9HCN3 771 aa4.39□□□□□ -1.71
CD46-218ENST00000496723 NECTIN3Q9NQS3 549 aa4.39□□□□□ -1.71
CD46-218ENST00000496723 TM7SF3Q9NS93 570 aa4.39□□□□□ -1.71
CD46-218ENST00000496723 SLC39A10Q9ULF5 831 aa4.39□□□□□ -1.71
CD46-218ENST00000496723 MYMKA6NI61 221 aa4.38□□□□□ -1.71
CD46-218ENST00000496723 PLA2G6O60733 806 aa4.38□□□□□ -1.71
CD46-218ENST00000496723 BCAR3O75815 825 aa4.38□□□□□ -1.71
CD46-218ENST00000496723 IGHMBP2P38935 993 aaKnown RBP4.38□□□□□ -1.71
CD46-218ENST00000496723 BTKQ06187 659 aa4.38□□□□□ -1.71
CD46-218ENST00000496723 KPNB1Q14974 876 aaKnown RBP4.38□□□□□ -1.71
CD46-218ENST00000496723 DAZAP2Q15038 168 aaPredicted RBP4.38□□□□□ -1.71
CD46-218ENST00000496723 PFKFB3Q16875 520 aaPredicted RBP4.38□□□□□ -1.71
CD46-218ENST00000496723 DGKKQ5KSL6 1271 aa4.38□□□□□ -1.71
CD46-218ENST00000496723 MEX3CQ5U5Q3 659 aaKnown RBP4.38□□□□□ -1.71
CD46-218ENST00000496723 RUSC1-AS1Q66K80 236 aa4.38□□□□□ -1.71
CD46-218ENST00000496723 CCDC144NLQ6NUI1 221 aa4.38□□□□□ -1.71
CD46-218ENST00000496723 XRRA1Q6P2D8 792 aa4.38□□□□□ -1.71
CD46-218ENST00000496723 SYTL1Q8IYJ3 562 aa4.38□□□□□ -1.71
CD46-218ENST00000496723 CLASRPQ8N2M8 674 aaKnown RBP4.38□□□□□ -1.71
CD46-218ENST00000496723 SPATA3Q8NHX4 192 aa4.38□□□□□ -1.71
CD46-218ENST00000496723 MAP4K1Q92918 833 aa4.38□□□□□ -1.71
CD46-218ENST00000496723 EIF3CQ99613 913 aaKnown RBP4.38□□□□□ -1.71
CD46-218ENST00000496723 NUDT22Q9BRQ3 303 aa4.38□□□□□ -1.71
CD46-218ENST00000496723 STK33Q9BYT3 514 aa4.38□□□□□ -1.71
CD46-218ENST00000496723 SPRTNQ9H040 489 aaPredicted RBP4.38□□□□□ -1.71
CD46-218ENST00000496723 ABHD10Q9NUJ1 306 aa4.38□□□□□ -1.71
CD46-218ENST00000496723 CDC23Q9UJX2 597 aa4.38□□□□□ -1.71
CD46-218ENST00000496723 ZNF580Q9UK33 172 aa4.38□□□□□ -1.71
CD46-218ENST00000496723 MAFFQ9ULX9 164 aa4.38□□□□□ -1.71
CD46-218ENST00000496723 CNTNAP2Q9UHC6 1331 aa4.38□□□□□ -1.71
CD46-218ENST00000496723 J3KTA2 159 aa4.37□□□□□ -1.71
CD46-218ENST00000496723 FCHO1O14526 889 aa4.37□□□□□ -1.71
CD46-218ENST00000496723 ALADP13716 330 aa4.37□□□□□ -1.71
CD46-218ENST00000496723 MMP8P22894 467 aa4.37□□□□□ -1.71
CD46-218ENST00000496723 ATP5F1P24539 256 aaPredicted RBP4.37□□□□□ -1.71
CD46-218ENST00000496723 DUSP1P28562 367 aa4.37□□□□□ -1.71
CD46-218ENST00000496723 CNGA3Q16281 694 aa4.37□□□□□ -1.71
CD46-218ENST00000496723 ARL6IP4Q66PJ3 421 aaKnown RBP4.37□□□□□ -1.71
CD46-218ENST00000496723 KRTAP5-11Q6L8G4 156 aa4.37□□□□□ -1.71
CD46-218ENST00000496723 PIK3AP1Q6ZUJ8 805 aa4.37□□□□□ -1.71
CD46-218ENST00000496723 TTC30AQ86WT1 665 aa4.37□□□□□ -1.71
CD46-218ENST00000496723 SKAP1Q86WV1 359 aa4.37□□□□□ -1.71
CD46-218ENST00000496723 ZDHHC17Q8IUH5 632 aa4.37□□□□□ -1.71
CD46-218ENST00000496723 PIGOQ8TEQ8 1089 aa4.37□□□□□ -1.71
CD46-218ENST00000496723 IPO4Q8TEX9 1081 aaKnown RBP4.37□□□□□ -1.71
CD46-218ENST00000496723 OVCA2Q8WZ82 227 aa4.37□□□□□ -1.71
CD46-218ENST00000496723 MUL1Q969V5 352 aa4.37□□□□□ -1.71
CD46-218ENST00000496723 NUAK2Q9H093 628 aa4.37□□□□□ -1.71
CD46-218ENST00000496723 EPS8L2Q9H6S3 715 aa4.37□□□□□ -1.71
CD46-218ENST00000496723 ARFGAP3Q9NP61 516 aa4.37□□□□□ -1.71
CD46-218ENST00000496723 HELLSQ9NRZ9 838 aa4.37□□□□□ -1.71
CD46-218ENST00000496723 ARL8BQ9NVJ2 186 aa4.37□□□□□ -1.71
CD46-218ENST00000496723 SEMA5BQ9P283 1151 aa4.37□□□□□ -1.71
CD46-218ENST00000496723 CA14Q9ULX7 337 aa4.37□□□□□ -1.71
CD46-218ENST00000496723 DTNAQ9Y4J8 743 aa4.37□□□□□ -1.71
CD46-218ENST00000496723 HEMK1Q9Y5R4 338 aaPredicted RBP4.37□□□□□ -1.71
CD46-218ENST00000496723 SPATA31A1Q5TZJ5 1347 aa4.37□□□□□ -1.71
CD46-218ENST00000496723 CCDC187A0A096LP49 1063 aa4.36□□□□□ -1.71
CD46-218ENST00000496723 PNMA6EA0A0J9YXQ4 647 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms