RNA–Protein interactions for RNA: ENST00000496677.5

CLDN12-213, Transcript of claudin 12, humanhuman

TSL 1 (best)

Gene CLDN12, Length 1,098 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12-213ENST00000496677 MLKLQ8NB16 471 aa12.94□□□□□ -0.34
CLDN12-213ENST00000496677 CLSTN2Q9H4D0 955 aa12.94□□□□□ -0.34
CLDN12-213ENST00000496677 UBE2TQ9NPD8 197 aaPredicted RBP12.94□□□□□ -0.34
CLDN12-213ENST00000496677 RXFP3Q9NSD7 469 aa12.94□□□□□ -0.34
CLDN12-213ENST00000496677 ABCC13Q9NSE7 274 aa12.94□□□□□ -0.34
CLDN12-213ENST00000496677 SFMBT1Q9UHJ3 866 aa12.94□□□□□ -0.34
CLDN12-213ENST00000496677 MBD1Q9UIS9 605 aaPredicted RBP12.94□□□□□ -0.34
CLDN12-213ENST00000496677 CDV3Q9UKY7 258 aaKnown RBP12.94□□□□□ -0.34
CLDN12-213ENST00000496677 CLEC4EQ9ULY5 219 aa12.94□□□□□ -0.34
CLDN12-213ENST00000496677 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.93□□□□□ -0.34
CLDN12-213ENST00000496677 TCRBV21S2A2A0A5A6 115 aa12.93□□□□□ -0.34
CLDN12-213ENST00000496677 IGLV3-27P01718 113 aa12.93□□□□□ -0.34
CLDN12-213ENST00000496677 LCP1P13796 627 aa12.93□□□□□ -0.34
CLDN12-213ENST00000496677 MPLP40238 635 aa12.93□□□□□ -0.34
CLDN12-213ENST00000496677 WASP42768 502 aa12.93□□□□□ -0.34
CLDN12-213ENST00000496677 LIMK1P53667 647 aa12.93□□□□□ -0.34
CLDN12-213ENST00000496677 ENPP2Q13822 863 aa12.93□□□□□ -0.34
CLDN12-213ENST00000496677 ELF2Q15723 593 aa12.93□□□□□ -0.34
CLDN12-213ENST00000496677 MEA1Q16626 185 aa12.93□□□□□ -0.34
CLDN12-213ENST00000496677 GEN1Q17RS7 908 aa12.93□□□□□ -0.34
CLDN12-213ENST00000496677 KIAA1211LQ6NV74 962 aa12.93□□□□□ -0.34
CLDN12-213ENST00000496677 DPY19L2P1Q6NXN4 242 aa12.93□□□□□ -0.34
CLDN12-213ENST00000496677 DENND1BQ6P3S1 775 aa12.93□□□□□ -0.34
CLDN12-213ENST00000496677 TRIM65Q6PJ69 517 aa12.93□□□□□ -0.34
CLDN12-213ENST00000496677 SIX6OS1Q8N1H7 587 aa12.93□□□□□ -0.34
CLDN12-213ENST00000496677 CLEC4CQ8WTT0 213 aa12.93□□□□□ -0.34
CLDN12-213ENST00000496677 RLN3Q8WXF3 142 aa12.93□□□□□ -0.34
CLDN12-213ENST00000496677 BHMTQ93088 406 aa12.93□□□□□ -0.34
CLDN12-213ENST00000496677 IPO9Q96P70 1041 aaKnown RBP12.93□□□□□ -0.34
CLDN12-213ENST00000496677 SLC2A11Q9BYW1 496 aa12.93□□□□□ -0.34
CLDN12-213ENST00000496677 SMOC1Q9H4F8 434 aa12.93□□□□□ -0.34
CLDN12-213ENST00000496677 VPS45Q9NRW7 570 aa12.93□□□□□ -0.34
CLDN12-213ENST00000496677 PLXND1Q9Y4D7 1925 aa12.93□□□□□ -0.34
CLDN12-213ENST00000496677 LAMA1P25391 3075 aa12.92□□□□□ -0.34
CLDN12-213ENST00000496677 SPTBN2O15020 2390 aa12.92□□□□□ -0.34
CLDN12-213ENST00000496677 DCDC2BA2VCK2 349 aa12.92□□□□□ -0.34
CLDN12-213ENST00000496677 GTPBP10A4D1E9 387 aaKnown RBP12.92□□□□□ -0.34
CLDN12-213ENST00000496677 BECN2A8MW95 431 aa12.92□□□□□ -0.34
CLDN12-213ENST00000496677 M0QYV0 167 aa12.92□□□□□ -0.34
CLDN12-213ENST00000496677 PIK3R2O00459 728 aa12.92□□□□□ -0.34
CLDN12-213ENST00000496677 SLC9A1P19634 815 aa12.92□□□□□ -0.34
CLDN12-213ENST00000496677 APBA1Q02410 837 aa12.92□□□□□ -0.34
CLDN12-213ENST00000496677 TMEM215Q68D42 235 aa12.92□□□□□ -0.34
CLDN12-213ENST00000496677 RNF43Q68DV7 783 aa12.92□□□□□ -0.34
CLDN12-213ENST00000496677 SMYD5Q6GMV2 418 aa12.92□□□□□ -0.34
CLDN12-213ENST00000496677 GJB7Q6PEY0 223 aa12.92□□□□□ -0.34
CLDN12-213ENST00000496677 SCUBE3Q8IX30 993 aa12.92□□□□□ -0.34
CLDN12-213ENST00000496677 IPO4Q8TEX9 1081 aaKnown RBP12.92□□□□□ -0.34
CLDN12-213ENST00000496677 STK32AQ8WU08 396 aa12.92□□□□□ -0.34
CLDN12-213ENST00000496677 RNF139Q8WU17 664 aa12.92□□□□□ -0.34
CLDN12-213ENST00000496677 HMGB4Q8WW32 186 aa12.92□□□□□ -0.34
CLDN12-213ENST00000496677 ZNF606Q8WXB4 792 aa12.92□□□□□ -0.34
CLDN12-213ENST00000496677 CRACR2AQ9BSW2 395 aa12.92□□□□□ -0.34
CLDN12-213ENST00000496677 SLC4A5Q9BY07 1137 aa12.92□□□□□ -0.34
CLDN12-213ENST00000496677 SIX2Q9NPC8 291 aa12.92□□□□□ -0.34
CLDN12-213ENST00000496677 ACP6Q9NPH0 428 aa12.92□□□□□ -0.34
CLDN12-213ENST00000496677 THAP10Q9P2Z0 257 aaPredicted RBP12.92□□□□□ -0.34
CLDN12-213ENST00000496677 CYTH4Q9UIA0 394 aa12.92□□□□□ -0.34
CLDN12-213ENST00000496677 THADAQ6YHU6 1953 aa12.92□□□□□ -0.34
CLDN12-213ENST00000496677 WASH3PC4AMC7 463 aa12.91□□□□□ -0.34
CLDN12-213ENST00000496677 MSI1O43347 362 aaKnown RBP12.91□□□□□ -0.34
CLDN12-213ENST00000496677 FBXO21O94952 628 aa12.91□□□□□ -0.34
CLDN12-213ENST00000496677 CAVIN2O95810 425 aa12.91□□□□□ -0.34
CLDN12-213ENST00000496677 LATS1O95835 1130 aa12.91□□□□□ -0.34
CLDN12-213ENST00000496677 LTFP02788 710 aa12.91□□□□□ -0.34
CLDN12-213ENST00000496677 HOXB2P14652 356 aa12.91□□□□□ -0.34
CLDN12-213ENST00000496677 PON1P27169 355 aa12.91□□□□□ -0.34
CLDN12-213ENST00000496677 HOXD9P28356 352 aaPredicted RBP12.91□□□□□ -0.34
CLDN12-213ENST00000496677 GBP1P32455 592 aa12.91□□□□□ -0.34
CLDN12-213ENST00000496677 HARS2P49590 506 aaKnown RBP12.91□□□□□ -0.34
CLDN12-213ENST00000496677 CREB5Q02930 508 aa12.91□□□□□ -0.34
CLDN12-213ENST00000496677 SPDYCQ5MJ68 293 aa12.91□□□□□ -0.34
CLDN12-213ENST00000496677 ADGRF1Q5T601 910 aa12.91□□□□□ -0.34
CLDN12-213ENST00000496677 BEND5Q7L4P6 421 aa12.91□□□□□ -0.34
CLDN12-213ENST00000496677 ENOSF1Q7L5Y1 443 aa12.91□□□□□ -0.34
CLDN12-213ENST00000496677 KIAA0907Q7Z7F0 614 aaPredicted RBP12.91□□□□□ -0.34
CLDN12-213ENST00000496677 TMEM110Q86TL2 294 aa12.91□□□□□ -0.34
CLDN12-213ENST00000496677 CHPFQ8IZ52 775 aa12.91□□□□□ -0.34
CLDN12-213ENST00000496677 WDTC1Q8N5D0 677 aa12.91□□□□□ -0.34
CLDN12-213ENST00000496677 SHC3Q92529 594 aa12.91□□□□□ -0.34
CLDN12-213ENST00000496677 AZIN2Q96A70 460 aa12.91□□□□□ -0.34
CLDN12-213ENST00000496677 THAP9Q9H5L6 903 aa12.91□□□□□ -0.34
CLDN12-213ENST00000496677 CACNA2D2Q9NY47 1150 aa12.91□□□□□ -0.34
CLDN12-213ENST00000496677 NUP205Q92621 2012 aa12.9□□□□□ -0.34
CLDN12-213ENST00000496677 CYBBP04839 570 aa12.9□□□□□ -0.34
CLDN12-213ENST00000496677 C7P10643 843 aa12.9□□□□□ -0.34
CLDN12-213ENST00000496677 KRT5P13647 590 aa12.9□□□□□ -0.34
CLDN12-213ENST00000496677 NDUFV2P19404 249 aa12.9□□□□□ -0.34
CLDN12-213ENST00000496677 RING1Q06587 406 aa12.9□□□□□ -0.34
CLDN12-213ENST00000496677 BYSLQ13895 437 aaKnown RBP12.9□□□□□ -0.34
CLDN12-213ENST00000496677 DPCR1Q3MIW9 517 aa12.9□□□□□ -0.34
CLDN12-213ENST00000496677 MPPE1Q53F39 396 aa12.9□□□□□ -0.34
CLDN12-213ENST00000496677 TCEAL6Q6IPX3 200 aa12.9□□□□□ -0.34
CLDN12-213ENST00000496677 SDE2Q6IQ49 451 aa12.9□□□□□ -0.34
CLDN12-213ENST00000496677 GBP6Q6ZN66 633 aa12.9□□□□□ -0.34
CLDN12-213ENST00000496677 DDI1Q8WTU0 396 aa12.9□□□□□ -0.34
CLDN12-213ENST00000496677 TCEAL3Q969E4 200 aa12.9□□□□□ -0.34
CLDN12-213ENST00000496677 SLC39A13Q96H72 371 aa12.9□□□□□ -0.34
CLDN12-213ENST00000496677 LMLNQ96KR4 655 aa12.9□□□□□ -0.34
CLDN12-213ENST00000496677 FAM81BQ96LP2 452 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms