RNA–Protein interactions for RNA: ENST00000496633.1

CDHR3-214, Transcript of cadherin related family member 3, humanhuman

TSL 5

Gene CDHR3, Length 949 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-214ENST00000496633 SOX5P35711 763 aa7.92□□□□□ -1.14
CDHR3-214ENST00000496633 DPP6P42658 865 aa7.92□□□□□ -1.14
CDHR3-214ENST00000496633 SOX9P48436 509 aa7.92□□□□□ -1.14
CDHR3-214ENST00000496633 DGKGP49619 791 aa7.92□□□□□ -1.14
CDHR3-214ENST00000496633 RGS7P49802 495 aa7.92□□□□□ -1.14
CDHR3-214ENST00000496633 TBX4P57082 545 aa7.92□□□□□ -1.14
CDHR3-214ENST00000496633 ZXDBP98169 803 aa7.92□□□□□ -1.14
CDHR3-214ENST00000496633 ARID5AQ03989 594 aa7.92□□□□□ -1.14
CDHR3-214ENST00000496633 KCNMA1Q12791 1236 aa7.92□□□□□ -1.14
CDHR3-214ENST00000496633 HSP90AA4PQ58FG1 418 aa7.92□□□□□ -1.14
CDHR3-214ENST00000496633 FSTL4Q6MZW2 842 aa7.92□□□□□ -1.14
CDHR3-214ENST00000496633 TXNDC11Q6PKC3 985 aa7.92□□□□□ -1.14
CDHR3-214ENST00000496633 Q6ZNB5 142 aa7.92□□□□□ -1.14
CDHR3-214ENST00000496633 ERICH1Q86X53 443 aa7.92□□□□□ -1.14
CDHR3-214ENST00000496633 ETFBKMTQ8IXQ9 262 aa7.92□□□□□ -1.14
CDHR3-214ENST00000496633 FAM217AQ8IXS0 508 aa7.92□□□□□ -1.14
CDHR3-214ENST00000496633 AOPEPQ8N6M6 819 aa7.92□□□□□ -1.14
CDHR3-214ENST00000496633 ATP6V0D2Q8N8Y2 350 aa7.92□□□□□ -1.14
CDHR3-214ENST00000496633 TERB1Q8NA31 727 aa7.92□□□□□ -1.14
CDHR3-214ENST00000496633 ZNF397Q8NF99 534 aaPredicted RBP7.92□□□□□ -1.14
CDHR3-214ENST00000496633 TTC8Q8TAM2 541 aa7.92□□□□□ -1.14
CDHR3-214ENST00000496633 WFIKKN2Q8TEU8 576 aa7.92□□□□□ -1.14
CDHR3-214ENST00000496633 DDI1Q8WTU0 396 aa7.92□□□□□ -1.14
CDHR3-214ENST00000496633 NELL1Q92832 810 aa7.92□□□□□ -1.14
CDHR3-214ENST00000496633 C18orf8Q96DM3 657 aa7.92□□□□□ -1.14
CDHR3-214ENST00000496633 BTN2A3PQ96KV6 586 aa7.92□□□□□ -1.14
CDHR3-214ENST00000496633 NAA15Q9BXJ9 866 aaKnown RBP7.92□□□□□ -1.14
CDHR3-214ENST00000496633 LINC00597Q9H2U6 94 aa7.92□□□□□ -1.14
CDHR3-214ENST00000496633 SIX2Q9NPC8 291 aa7.92□□□□□ -1.14
CDHR3-214ENST00000496633 DNAJC17Q9NVM6 304 aaKnown RBP7.92□□□□□ -1.14
CDHR3-214ENST00000496633 OSER1Q9NX31 292 aa7.92□□□□□ -1.14
CDHR3-214ENST00000496633 EBF1Q9UH73 591 aa7.92□□□□□ -1.14
CDHR3-214ENST00000496633 SLC27A6Q9Y2P4 619 aa7.92□□□□□ -1.14
CDHR3-214ENST00000496633 ANKRD62A6NC57 917 aa7.91□□□□□ -1.14
CDHR3-214ENST00000496633 OTOL1A6NHN0 477 aaPredicted RBP7.91□□□□□ -1.14
CDHR3-214ENST00000496633 E5RJQ4 531 aa7.91□□□□□ -1.14
CDHR3-214ENST00000496633 NEDD8-MDP1E9PL57 170 aa7.91□□□□□ -1.14
CDHR3-214ENST00000496633 TULP2O00295 520 aa7.91□□□□□ -1.14
CDHR3-214ENST00000496633 GPR37O15354 613 aa7.91□□□□□ -1.14
CDHR3-214ENST00000496633 GFRA3O60609 400 aa7.91□□□□□ -1.14
CDHR3-214ENST00000496633 LILRB5O75023 590 aa7.91□□□□□ -1.14
CDHR3-214ENST00000496633 LRP3O75074 770 aa7.91□□□□□ -1.14
CDHR3-214ENST00000496633 TULP3O75386 442 aa7.91□□□□□ -1.14
CDHR3-214ENST00000496633 TBX18O95935 607 aa7.91□□□□□ -1.14
CDHR3-214ENST00000496633 EGFP01133 1207 aa7.91□□□□□ -1.14
CDHR3-214ENST00000496633 PENKP01210 267 aaPredicted RBP7.91□□□□□ -1.14
CDHR3-214ENST00000496633 SDHBP21912 280 aa7.91□□□□□ -1.14
CDHR3-214ENST00000496633 NOS2P35228 1153 aa7.91□□□□□ -1.14
CDHR3-214ENST00000496633 OPRD1P41143 372 aa7.91□□□□□ -1.14
CDHR3-214ENST00000496633 GABRB2P47870 512 aa7.91□□□□□ -1.14
CDHR3-214ENST00000496633 MRE11P49959 708 aa7.91□□□□□ -1.14
CDHR3-214ENST00000496633 POLR2FP61218 127 aaKnown RBP7.91□□□□□ -1.14
CDHR3-214ENST00000496633 CDR2Q01850 454 aa7.91□□□□□ -1.14
CDHR3-214ENST00000496633 SLC6A3Q01959 620 aa7.91□□□□□ -1.14
CDHR3-214ENST00000496633 SFSWAPQ12872 951 aaKnown RBP7.91□□□□□ -1.14
CDHR3-214ENST00000496633 STARD3Q14849 445 aa7.91□□□□□ -1.14
CDHR3-214ENST00000496633 NCAPHQ15003 741 aa7.91□□□□□ -1.14
CDHR3-214ENST00000496633 FIGNQ5HY92 759 aa7.91□□□□□ -1.14
CDHR3-214ENST00000496633 TMCO4Q5TGY1 634 aa7.91□□□□□ -1.14
CDHR3-214ENST00000496633 DENND1BQ6P3S1 775 aa7.91□□□□□ -1.14
CDHR3-214ENST00000496633 SLC26A9Q7LBE3 791 aa7.91□□□□□ -1.14
CDHR3-214ENST00000496633 BHLHA9Q7RTU4 235 aa7.91□□□□□ -1.14
CDHR3-214ENST00000496633 SLC47A2Q86VL8 602 aa7.91□□□□□ -1.14
CDHR3-214ENST00000496633 VPS36Q86VN1 386 aa7.91□□□□□ -1.14
CDHR3-214ENST00000496633 WDR5BQ86VZ2 330 aa7.91□□□□□ -1.14
CDHR3-214ENST00000496633 TMEM25Q86YD3 366 aa7.91□□□□□ -1.14
CDHR3-214ENST00000496633 DENND1CQ8IV53 801 aa7.91□□□□□ -1.14
CDHR3-214ENST00000496633 RPLP0P6Q8NHW5 317 aa7.91□□□□□ -1.14
CDHR3-214ENST00000496633 RIN3Q8TB24 985 aa7.91□□□□□ -1.14
CDHR3-214ENST00000496633 USP33Q8TEY7 942 aa7.91□□□□□ -1.14
CDHR3-214ENST00000496633 EDEM1Q92611 657 aa7.91□□□□□ -1.14
CDHR3-214ENST00000496633 TMA16Q96EY4 203 aaKnown RBP7.91□□□□□ -1.14
CDHR3-214ENST00000496633 LOXL4Q96JB6 756 aa7.91□□□□□ -1.14
CDHR3-214ENST00000496633 RETREG1Q9H6L5 497 aa7.91□□□□□ -1.14
CDHR3-214ENST00000496633 FBRSQ9HAH7 460 aa7.91□□□□□ -1.14
CDHR3-214ENST00000496633 FAM207AQ9NSI2 230 aaPredicted RBP7.91□□□□□ -1.14
CDHR3-214ENST00000496633 TJP2Q9UDY2 1190 aa7.91□□□□□ -1.14
CDHR3-214ENST00000496633 FBXO10Q9UK96 956 aa7.91□□□□□ -1.14
CDHR3-214ENST00000496633 AGO1Q9UL18 857 aaKnown RBP7.91□□□□□ -1.14
CDHR3-214ENST00000496633 MMP17Q9ULZ9 603 aa7.91□□□□□ -1.14
CDHR3-214ENST00000496633 FHOD1Q9Y613 1164 aa7.91□□□□□ -1.14
CDHR3-214ENST00000496633 BZW2Q9Y6E2 419 aaKnown RBP7.91□□□□□ -1.14
CDHR3-214ENST00000496633 PAPSS1O43252 624 aaPredicted RBP7.9□□□□□ -1.14
CDHR3-214ENST00000496633 CBFA2T2O43439 604 aa7.9□□□□□ -1.14
CDHR3-214ENST00000496633 ACSL4O60488 711 aa7.9□□□□□ -1.14
CDHR3-214ENST00000496633 GREM1O60565 184 aa7.9□□□□□ -1.14
CDHR3-214ENST00000496633 MOCS3O95396 460 aa7.9□□□□□ -1.14
CDHR3-214ENST00000496633 TRUB2O95900 331 aaKnown RBP7.9□□□□□ -1.14
CDHR3-214ENST00000496633 IGLV3-27P01718 113 aa7.9□□□□□ -1.14
CDHR3-214ENST00000496633 CALB1P05937 261 aa7.9□□□□□ -1.14
CDHR3-214ENST00000496633 ATP5BP06576 529 aaKnown RBP7.9□□□□□ -1.14
CDHR3-214ENST00000496633 HMBSP08397 361 aa7.9□□□□□ -1.14
CDHR3-214ENST00000496633 NTSR1P30989 418 aa7.9□□□□□ -1.14
CDHR3-214ENST00000496633 MATKP42679 507 aa7.9□□□□□ -1.14
CDHR3-214ENST00000496633 NSFP46459 744 aaKnown RBP7.9□□□□□ -1.14
CDHR3-214ENST00000496633 JAM2P57087 298 aa7.9□□□□□ -1.14
CDHR3-214ENST00000496633 SLC12A1Q13621 1099 aa7.9□□□□□ -1.14
CDHR3-214ENST00000496633 DMC1Q14565 340 aa7.9□□□□□ -1.14
CDHR3-214ENST00000496633 USP39Q53GS9 565 aaKnown RBP7.9□□□□□ -1.14
CDHR3-214ENST00000496633 DCAF6Q58WW2 860 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms