RNA–Protein interactions for RNA: ENST00000496462.1

U2AF1-212, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 3,973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-212ENST00000496462 PPP2R2CQ9Y2T4 447 aa8.95□□□□□ -0.98
U2AF1-212ENST00000496462 SOWAHDA6NJG2 315 aa8.95□□□□□ -0.98
U2AF1-212ENST00000496462 DDX3XO00571 662 aaKnown RBP eCLIP8.95□□□□□ -0.98
U2AF1-212ENST00000496462 ACSL4O60488 711 aa8.95□□□□□ -0.98
U2AF1-212ENST00000496462 LILRB3O75022 631 aa8.95□□□□□ -0.98
U2AF1-212ENST00000496462 ALDH1A2O94788 518 aa8.95□□□□□ -0.98
U2AF1-212ENST00000496462 POLR2EP19388 210 aaKnown RBP8.95□□□□□ -0.98
U2AF1-212ENST00000496462 CORO1AP31146 461 aaKnown RBP8.95□□□□□ -0.98
U2AF1-212ENST00000496462 RING1Q06587 406 aa8.95□□□□□ -0.98
U2AF1-212ENST00000496462 GSTA5Q7RTV2 222 aa8.95□□□□□ -0.98
U2AF1-212ENST00000496462 DENND1CQ8IV53 801 aa8.95□□□□□ -0.98
U2AF1-212ENST00000496462 MFN1Q8IWA4 741 aa8.95□□□□□ -0.98
U2AF1-212ENST00000496462 RCOR2Q8IZ40 523 aa8.95□□□□□ -0.98
U2AF1-212ENST00000496462 HS6ST3Q8IZP7 471 aa8.95□□□□□ -0.98
U2AF1-212ENST00000496462 PGBD3Q8N328 593 aa8.95□□□□□ -0.98
U2AF1-212ENST00000496462 CARNMT1Q8N4J0 409 aa8.95□□□□□ -0.98
U2AF1-212ENST00000496462 KIF18AQ8NI77 898 aa8.95□□□□□ -0.98
U2AF1-212ENST00000496462 SCAMP5Q8TAC9 235 aa8.95□□□□□ -0.98
U2AF1-212ENST00000496462 FGF13Q92913 245 aa8.95□□□□□ -0.98
U2AF1-212ENST00000496462 NECAB3Q96P71 396 aaPredicted RBP8.95□□□□□ -0.98
U2AF1-212ENST00000496462 PPP1R2P1Q96PQ5 205 aa8.95□□□□□ -0.98
U2AF1-212ENST00000496462 DDX23Q9BUQ8 820 aaKnown RBP8.95□□□□□ -0.98
U2AF1-212ENST00000496462 MTPAPQ9NVV4 582 aaKnown RBP eCLIP8.95□□□□□ -0.98
U2AF1-212ENST00000496462 DNMT3BQ9UBC3 853 aaKnown RBP8.95□□□□□ -0.98
U2AF1-212ENST00000496462 TLR6Q9Y2C9 796 aa8.95□□□□□ -0.98
U2AF1-212ENST00000496462 HEPACAM2A8MVW5 462 aa8.94□□□□□ -0.98
U2AF1-212ENST00000496462 TIMM44O43615 452 aa8.94□□□□□ -0.98
U2AF1-212ENST00000496462 BUB1O43683 1085 aa8.94□□□□□ -0.98
U2AF1-212ENST00000496462 TJP3O95049 919 aa8.94□□□□□ -0.98
U2AF1-212ENST00000496462 EPHB2P29323 1055 aa8.94□□□□□ -0.98
U2AF1-212ENST00000496462 GPR15P49685 360 aa8.94□□□□□ -0.98
U2AF1-212ENST00000496462 TDGQ13569 410 aa8.94□□□□□ -0.98
U2AF1-212ENST00000496462 ACCSLQ4AC99 568 aa8.94□□□□□ -0.98
U2AF1-212ENST00000496462 CPXM1Q96SM3 734 aa8.94□□□□□ -0.98
U2AF1-212ENST00000496462 ISCUQ9H1K1 167 aa8.94□□□□□ -0.98
U2AF1-212ENST00000496462 NOCTQ9UK39 431 aaKnown RBP8.94□□□□□ -0.98
U2AF1-212ENST00000496462 PCDHGC5Q9Y5F6 944 aa8.94□□□□□ -0.98
U2AF1-212ENST00000496462 ZSCAN5CA6NGD5 496 aaPredicted RBP8.94□□□□□ -0.98
U2AF1-212ENST00000496462 PPP1R12AO14974 1030 aaPredicted RBP8.94□□□□□ -0.98
U2AF1-212ENST00000496462 MCF2LO15068 1137 aa8.94□□□□□ -0.98
U2AF1-212ENST00000496462 MTSS1O43312 755 aa8.94□□□□□ -0.98
U2AF1-212ENST00000496462 MBTPS2O43462 519 aa8.94□□□□□ -0.98
U2AF1-212ENST00000496462 CLDN11O75508 207 aa8.94□□□□□ -0.98
U2AF1-212ENST00000496462 PROSCO94903 275 aa8.94□□□□□ -0.98
U2AF1-212ENST00000496462 MAN1A1P33908 653 aa8.94□□□□□ -0.98
U2AF1-212ENST00000496462 IL31Q6EBC2 164 aa8.94□□□□□ -0.98
U2AF1-212ENST00000496462 WDR59Q6PJI9 974 aa8.94□□□□□ -0.98
U2AF1-212ENST00000496462 TMCO3Q6UWJ1 677 aa8.94□□□□□ -0.98
U2AF1-212ENST00000496462 LIMS2Q7Z4I7 341 aa8.94□□□□□ -0.98
U2AF1-212ENST00000496462 XYLT1Q86Y38 959 aa8.94□□□□□ -0.98
U2AF1-212ENST00000496462 GABPB2Q8TAK5 448 aaPredicted RBP8.94□□□□□ -0.98
U2AF1-212ENST00000496462 SLC35G2Q8TBE7 412 aa8.94□□□□□ -0.98
U2AF1-212ENST00000496462 ACDQ96AP0 544 aa8.94□□□□□ -0.98
U2AF1-212ENST00000496462 RUNDC3BQ96NL0 473 aa8.94□□□□□ -0.98
U2AF1-212ENST00000496462 C2orf49Q9BVC5 232 aaPredicted RBP8.94□□□□□ -0.98
U2AF1-212ENST00000496462 SMOC2Q9H3U7 446 aa8.94□□□□□ -0.98
U2AF1-212ENST00000496462 KIAA1522Q9P206 1035 aaPredicted RBP8.94□□□□□ -0.98
U2AF1-212ENST00000496462 ARHGAP20Q9P2F6 1191 aa8.94□□□□□ -0.98
U2AF1-212ENST00000496462 MICAL3Q7RTP6 2002 aa8.94□□□□□ -0.98
U2AF1-212ENST00000496462 ECI2O75521 394 aa8.94□□□□□ -0.98
U2AF1-212ENST00000496462 TCP1P17987 556 aaKnown RBP8.94□□□□□ -0.98
U2AF1-212ENST00000496462 SLC7A9P82251 487 aa8.94□□□□□ -0.98
U2AF1-212ENST00000496462 TBX2Q13207 712 aaPredicted RBP8.94□□□□□ -0.98
U2AF1-212ENST00000496462 BYSLQ13895 437 aaKnown RBP8.94□□□□□ -0.98
U2AF1-212ENST00000496462 ZC3H12AQ5D1E8 599 aaKnown RBP8.94□□□□□ -0.98
U2AF1-212ENST00000496462 ERMARDQ5T6L9 678 aa8.94□□□□□ -0.98
U2AF1-212ENST00000496462 ARCQ7LC44 396 aa8.94□□□□□ -0.98
U2AF1-212ENST00000496462 FAM131BQ86XD5 332 aa8.94□□□□□ -0.98
U2AF1-212ENST00000496462 CCNYQ8ND76 341 aa8.94□□□□□ -0.98
U2AF1-212ENST00000496462 CHP1Q99653 195 aa8.94□□□□□ -0.98
U2AF1-212ENST00000496462 COL25A1Q9BXS0 654 aaPredicted RBP8.94□□□□□ -0.98
U2AF1-212ENST00000496462 CIPCQ9C0C6 399 aa8.94□□□□□ -0.98
U2AF1-212ENST00000496462 TKTL2Q9H0I9 626 aa8.94□□□□□ -0.98
U2AF1-212ENST00000496462 GKN1Q9NS71 199 aa8.94□□□□□ -0.98
U2AF1-212ENST00000496462 LIMD1Q9UGP4 676 aa8.94□□□□□ -0.98
U2AF1-212ENST00000496462 AP4E1Q9UPM8 1137 aa8.94□□□□□ -0.98
U2AF1-212ENST00000496462 LEFTY2O00292 366 aa8.93□□□□□ -0.98
U2AF1-212ENST00000496462 EPHB6O15197 1021 aa8.93□□□□□ -0.98
U2AF1-212ENST00000496462 PAPSS1O43252 624 aaPredicted RBP8.93□□□□□ -0.98
U2AF1-212ENST00000496462 ASLP04424 464 aa8.93□□□□□ -0.98
U2AF1-212ENST00000496462 PCK1P35558 622 aa8.93□□□□□ -0.98
U2AF1-212ENST00000496462 ITKQ08881 620 aa8.93□□□□□ -0.98
U2AF1-212ENST00000496462 POLD3Q15054 466 aaPredicted RBP8.93□□□□□ -0.98
U2AF1-212ENST00000496462 PM20D1Q6GTS8 502 aa8.93□□□□□ -0.98
U2AF1-212ENST00000496462 LRRC49Q8IUZ0 686 aa8.93□□□□□ -0.98
U2AF1-212ENST00000496462 ZNF276Q8N554 614 aa8.93□□□□□ -0.98
U2AF1-212ENST00000496462 UBR7Q8N806 425 aa8.93□□□□□ -0.98
U2AF1-212ENST00000496462 UHRF1Q96T88 793 aaPredicted RBP8.93□□□□□ -0.98
U2AF1-212ENST00000496462 NAPGQ99747 312 aaPredicted RBP8.93□□□□□ -0.98
U2AF1-212ENST00000496462 RTP3Q9BQQ7 232 aa8.93□□□□□ -0.98
U2AF1-212ENST00000496462 THAP2Q9H0W7 228 aa8.93□□□□□ -0.98
U2AF1-212ENST00000496462 CITO14578 2027 aa8.93□□□□□ -0.98
U2AF1-212ENST00000496462 TANC1Q9C0D5 1861 aa8.93□□□□□ -0.98
U2AF1-212ENST00000496462 YJEFN3A6XGL0 299 aa8.93□□□□□ -0.98
U2AF1-212ENST00000496462 E7ENQ6 273 aa8.93□□□□□ -0.98
U2AF1-212ENST00000496462 H7C0C1 242 aa8.93□□□□□ -0.98
U2AF1-212ENST00000496462 RNF225M0QZC1 329 aaPredicted RBP8.93□□□□□ -0.98
U2AF1-212ENST00000496462 PSTPIP1O43586 416 aa8.93□□□□□ -0.98
U2AF1-212ENST00000496462 LAMP2P13473 410 aa8.93□□□□□ -0.98
U2AF1-212ENST00000496462 GTF2F1P35269 517 aaKnown RBP eCLIP8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms