RNA–Protein interactions for RNA: ENST00000496445.5

VTI1A-209, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 853 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-209ENST00000496445 ZFHX4Q86UP3 3567 aa14.93□□□□□ -0.02
VTI1A-209ENST00000496445 M0QYV0 167 aa14.93□□□□□ -0.02
VTI1A-209ENST00000496445 PIK3R2O00459 728 aa14.93□□□□□ -0.02
VTI1A-209ENST00000496445 TM4SF5O14894 197 aa14.93□□□□□ -0.02
VTI1A-209ENST00000496445 MSI1O43347 362 aaKnown RBP14.93□□□□□ -0.02
VTI1A-209ENST00000496445 CAVIN2O95810 425 aa14.93□□□□□ -0.02
VTI1A-209ENST00000496445 GNA14O95837 355 aa14.93□□□□□ -0.02
VTI1A-209ENST00000496445 CHKAP35790 457 aa14.93□□□□□ -0.02
VTI1A-209ENST00000496445 CNGA2Q16280 664 aa14.93□□□□□ -0.02
VTI1A-209ENST00000496445 GEN1Q17RS7 908 aa14.93□□□□□ -0.02
VTI1A-209ENST00000496445 PPM1JQ5JR12 505 aa14.93□□□□□ -0.02
VTI1A-209ENST00000496445 STPG1Q5TH74 334 aa14.93□□□□□ -0.02
VTI1A-209ENST00000496445 BSPRYQ5W0U4 402 aa14.93□□□□□ -0.02
VTI1A-209ENST00000496445 CYP2U1Q7Z449 544 aa14.93□□□□□ -0.02
VTI1A-209ENST00000496445 CHPFQ8IZ52 775 aa14.93□□□□□ -0.02
VTI1A-209ENST00000496445 SIX6OS1Q8N1H7 587 aa14.93□□□□□ -0.02
VTI1A-209ENST00000496445 SCML4Q8N228 414 aa14.93□□□□□ -0.02
VTI1A-209ENST00000496445 CPXM2Q8N436 756 aa14.93□□□□□ -0.02
VTI1A-209ENST00000496445 EHBP1Q8NDI1 1231 aa14.93□□□□□ -0.02
VTI1A-209ENST00000496445 CLEC4CQ8WTT0 213 aa14.93□□□□□ -0.02
VTI1A-209ENST00000496445 SPACA7Q96KW9 195 aa14.93□□□□□ -0.02
VTI1A-209ENST00000496445 MED15Q96RN5 788 aa14.93□□□□□ -0.02
VTI1A-209ENST00000496445 SRRTQ9BXP5 876 aaKnown RBP14.93□□□□□ -0.02
VTI1A-209ENST00000496445 CNGB3Q9NQW8 809 aa14.93□□□□□ -0.02
VTI1A-209ENST00000496445 OLA1Q9NTK5 396 aaKnown RBP14.93□□□□□ -0.02
VTI1A-209ENST00000496445 SFMBT1Q9UHJ3 866 aa14.93□□□□□ -0.02
VTI1A-209ENST00000496445 RAD54BQ9Y620 910 aa14.93□□□□□ -0.02
VTI1A-209ENST00000496445 CHD8Q9HCK8 2581 aa14.93□□□□□ -0.02
VTI1A-209ENST00000496445 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa14.92□□□□□ -0.02
VTI1A-209ENST00000496445 LNP1A1A4G5 178 aa14.92□□□□□ -0.02
VTI1A-209ENST00000496445 PATE3B3GLJ2 98 aa14.92□□□□□ -0.02
VTI1A-209ENST00000496445 WASH3PC4AMC7 463 aa14.92□□□□□ -0.02
VTI1A-209ENST00000496445 GFRA2O00451 464 aa14.92□□□□□ -0.02
VTI1A-209ENST00000496445 AFPP02771 609 aaKnown RBP14.92□□□□□ -0.02
VTI1A-209ENST00000496445 NDUFV2P19404 249 aa14.92□□□□□ -0.02
VTI1A-209ENST00000496445 PTGER3P43115 390 aa14.92□□□□□ -0.02
VTI1A-209ENST00000496445 DHPSP49366 369 aaPredicted RBP14.92□□□□□ -0.02
VTI1A-209ENST00000496445 UBE2HP62256 183 aa14.92□□□□□ -0.02
VTI1A-209ENST00000496445 CETN1Q12798 172 aa14.92□□□□□ -0.02
VTI1A-209ENST00000496445 CAMK4Q16566 473 aa14.92□□□□□ -0.02
VTI1A-209ENST00000496445 ARMCX6Q7L4S7 300 aa14.92□□□□□ -0.02
VTI1A-209ENST00000496445 TMEFF1Q8IYR6 380 aa14.92□□□□□ -0.02
VTI1A-209ENST00000496445 PGBD3Q8N328 593 aa14.92□□□□□ -0.02
VTI1A-209ENST00000496445 TRIML1Q8N9V2 468 aa14.92□□□□□ -0.02
VTI1A-209ENST00000496445 IPO4Q8TEX9 1081 aaKnown RBP14.92□□□□□ -0.02
VTI1A-209ENST00000496445 PIWIL1Q96J94 861 aaKnown RBP14.92□□□□□ -0.02
VTI1A-209ENST00000496445 EDEM2Q9BV94 578 aa14.92□□□□□ -0.02
VTI1A-209ENST00000496445 INTS2Q9H0H0 1204 aaKnown RBP14.92□□□□□ -0.02
VTI1A-209ENST00000496445 SLC6A17Q9H1V8 727 aa14.92□□□□□ -0.02
VTI1A-209ENST00000496445 CD93Q9NPY3 652 aa14.92□□□□□ -0.02
VTI1A-209ENST00000496445 KIAA1468Q9P260 1216 aa14.92□□□□□ -0.02
VTI1A-209ENST00000496445 CNTN6Q9UQ52 1028 aa14.92□□□□□ -0.02
VTI1A-209ENST00000496445 HBS1LQ9Y450 684 aaKnown RBP14.92□□□□□ -0.02
VTI1A-209ENST00000496445 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.92□□□□□ -0.02
VTI1A-209ENST00000496445 PCDH15Q96QU1 1955 aa14.92□□□□□ -0.02
VTI1A-209ENST00000496445 PI4KAP42356 2102 aa14.92□□□□□ -0.02
VTI1A-209ENST00000496445 ADAMTS9Q9P2N4 1935 aa14.92□□□□□ -0.02
VTI1A-209ENST00000496445 HOXD9P28356 352 aaPredicted RBP14.91□□□□□ -0.02
VTI1A-209ENST00000496445 STILQ15468 1287 aa14.91□□□□□ -0.02
VTI1A-209ENST00000496445 IL31Q6EBC2 164 aa14.91□□□□□ -0.02
VTI1A-209ENST00000496445 MSANTD2Q6P1R3 559 aa14.91□□□□□ -0.02
VTI1A-209ENST00000496445 LPCAT2Q7L5N7 544 aa14.91□□□□□ -0.02
VTI1A-209ENST00000496445 ABCC13Q9NSE7 274 aa14.91□□□□□ -0.02
VTI1A-209ENST00000496445 RWDD2AQ9UIY3 292 aa14.91□□□□□ -0.02
VTI1A-209ENST00000496445 STOML2Q9UJZ1 356 aa14.91□□□□□ -0.02
VTI1A-209ENST00000496445 ATXN2Q99700 1313 aaKnown RBP14.91□□□□□ -0.02
VTI1A-209ENST00000496445 CEP295Q9C0D2 2601 aa14.9□□□□□ -0.02
VTI1A-209ENST00000496445 IGHV1OR15-9A0A0B4J2B8 117 aa14.9□□□□□ -0.02
VTI1A-209ENST00000496445 ADRB1P08588 477 aa14.9□□□□□ -0.02
VTI1A-209ENST00000496445 IL12RB1P42701 662 aa14.9□□□□□ -0.02
VTI1A-209ENST00000496445 RPL34P49207 117 aaKnown RBP14.9□□□□□ -0.02
VTI1A-209ENST00000496445 SGSHP51688 502 aa14.9□□□□□ -0.02
VTI1A-209ENST00000496445 ENPP2Q13822 863 aa14.9□□□□□ -0.02
VTI1A-209ENST00000496445 TMEM215Q68D42 235 aa14.9□□□□□ -0.02
VTI1A-209ENST00000496445 RNF43Q68DV7 783 aa14.9□□□□□ -0.02
VTI1A-209ENST00000496445 ANKS1BQ7Z6G8 1248 aa14.9□□□□□ -0.02
VTI1A-209ENST00000496445 DDI1Q8WTU0 396 aa14.9□□□□□ -0.02
VTI1A-209ENST00000496445 RNF139Q8WU17 664 aa14.9□□□□□ -0.02
VTI1A-209ENST00000496445 IRGQQ8WZA9 623 aa14.9□□□□□ -0.02
VTI1A-209ENST00000496445 PIGKQ92643 395 aa14.9□□□□□ -0.02
VTI1A-209ENST00000496445 HSFY1Q96LI6 401 aa14.9□□□□□ -0.02
VTI1A-209ENST00000496445 TMEM74BQ9NUR3 256 aa14.9□□□□□ -0.02
VTI1A-209ENST00000496445 THAP10Q9P2Z0 257 aaPredicted RBP14.9□□□□□ -0.02
VTI1A-209ENST00000496445 NYNRINQ9P2P1 1898 aaKnown RBP14.9□□□□□ -0.02
VTI1A-209ENST00000496445 ACACBO00763 2458 aa14.9□□□□□ -0.02
VTI1A-209ENST00000496445 FRYQ5TBA9 3013 aa14.9□□□□□ -0.02
VTI1A-209ENST00000496445 SPEGQ15772 3267 aa14.9□□□□□ -0.02
VTI1A-209ENST00000496445 GON4LQ3T8J9 2241 aa14.89□□□□□ -0.03
VTI1A-209ENST00000496445 MAP3K13O43283 966 aa14.89□□□□□ -0.03
VTI1A-209ENST00000496445 TSPAN3O60637 253 aa14.89□□□□□ -0.03
VTI1A-209ENST00000496445 LATS1O95835 1130 aa14.89□□□□□ -0.03
VTI1A-209ENST00000496445 IGLV3-27P01718 113 aa14.89□□□□□ -0.03
VTI1A-209ENST00000496445 LTFP02788 710 aa14.89□□□□□ -0.03
VTI1A-209ENST00000496445 CYBBP04839 570 aa14.89□□□□□ -0.03
VTI1A-209ENST00000496445 FYNP06241 537 aa14.89□□□□□ -0.03
VTI1A-209ENST00000496445 GPD2P43304 727 aa14.89□□□□□ -0.03
VTI1A-209ENST00000496445 HARS2P49590 506 aaKnown RBP14.89□□□□□ -0.03
VTI1A-209ENST00000496445 APBA1Q02410 837 aa14.89□□□□□ -0.03
VTI1A-209ENST00000496445 BYSLQ13895 437 aaKnown RBP14.89□□□□□ -0.03
VTI1A-209ENST00000496445 SPDYCQ5MJ68 293 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms