RNA–Protein interactions for RNA: ENST00000496043.5

PTPRF-214, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 5

Gene PTPRF, Length 415 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-214ENST00000496043 ACOX2Q99424 681 aa13.32□□□□□ -0.28
PTPRF-214ENST00000496043 GABRG3Q99928 467 aa13.32□□□□□ -0.28
PTPRF-214ENST00000496043 SLC2A11Q9BYW1 496 aa13.32□□□□□ -0.28
PTPRF-214ENST00000496043 INTS2Q9H0H0 1204 aaKnown RBP13.32□□□□□ -0.28
PTPRF-214ENST00000496043 UBE2TQ9NPD8 197 aaPredicted RBP13.32□□□□□ -0.28
PTPRF-214ENST00000496043 RXFP3Q9NSD7 469 aa13.32□□□□□ -0.28
PTPRF-214ENST00000496043 SFMBT1Q9UHJ3 866 aa13.32□□□□□ -0.28
PTPRF-214ENST00000496043 RWDD2AQ9UIY3 292 aa13.32□□□□□ -0.28
PTPRF-214ENST00000496043 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.32□□□□□ -0.28
PTPRF-214ENST00000496043 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.31□□□□□ -0.28
PTPRF-214ENST00000496043 M0QYV0 167 aa13.31□□□□□ -0.28
PTPRF-214ENST00000496043 NPC1O15118 1278 aa13.31□□□□□ -0.28
PTPRF-214ENST00000496043 ZNF217O75362 1048 aa13.31□□□□□ -0.28
PTPRF-214ENST00000496043 GABBR2O75899 941 aa13.31□□□□□ -0.28
PTPRF-214ENST00000496043 FBXO21O94952 628 aa13.31□□□□□ -0.28
PTPRF-214ENST00000496043 MFAP3P55082 362 aa13.31□□□□□ -0.28
PTPRF-214ENST00000496043 PPM1JQ5JR12 505 aa13.31□□□□□ -0.28
PTPRF-214ENST00000496043 RNF43Q68DV7 783 aa13.31□□□□□ -0.28
PTPRF-214ENST00000496043 SLC36A4Q6YBV0 504 aa13.31□□□□□ -0.28
PTPRF-214ENST00000496043 FAM217AQ8IXS0 508 aa13.31□□□□□ -0.28
PTPRF-214ENST00000496043 TMEFF1Q8IYR6 380 aa13.31□□□□□ -0.28
PTPRF-214ENST00000496043 FRMD1Q8N878 549 aa13.31□□□□□ -0.28
PTPRF-214ENST00000496043 PIGKQ92643 395 aa13.31□□□□□ -0.28
PTPRF-214ENST00000496043 TMA16Q96EY4 203 aaKnown RBP13.31□□□□□ -0.28
PTPRF-214ENST00000496043 FAM81BQ96LP2 452 aa13.31□□□□□ -0.28
PTPRF-214ENST00000496043 ZSWIM1Q9BR11 485 aa13.31□□□□□ -0.28
PTPRF-214ENST00000496043 MBD1Q9UIS9 605 aaPredicted RBP13.31□□□□□ -0.28
PTPRF-214ENST00000496043 CNTN6Q9UQ52 1028 aa13.31□□□□□ -0.28
PTPRF-214ENST00000496043 FRYLO94915 3013 aa13.31□□□□□ -0.28
PTPRF-214ENST00000496043 SPAG17Q6Q759 2223 aa13.3□□□□□ -0.28
PTPRF-214ENST00000496043 WASH3PC4AMC7 463 aa13.3□□□□□ -0.28
PTPRF-214ENST00000496043 PIK3R2O00459 728 aa13.3□□□□□ -0.28
PTPRF-214ENST00000496043 TM4SF5O14894 197 aa13.3□□□□□ -0.28
PTPRF-214ENST00000496043 AP5Z1O43299 807 aa13.3□□□□□ -0.28
PTPRF-214ENST00000496043 TSPAN3O60637 253 aa13.3□□□□□ -0.28
PTPRF-214ENST00000496043 LATS1O95835 1130 aa13.3□□□□□ -0.28
PTPRF-214ENST00000496043 CALCAP01258 141 aa13.3□□□□□ -0.28
PTPRF-214ENST00000496043 KRT5P13647 590 aa13.3□□□□□ -0.28
PTPRF-214ENST00000496043 DPP6P42658 865 aa13.3□□□□□ -0.28
PTPRF-214ENST00000496043 ACADSBP45954 432 aa13.3□□□□□ -0.28
PTPRF-214ENST00000496043 ZNF132P52740 706 aa13.3□□□□□ -0.28
PTPRF-214ENST00000496043 ZNF445P59923 1031 aa13.3□□□□□ -0.28
PTPRF-214ENST00000496043 ADGRF1Q5T601 910 aa13.3□□□□□ -0.28
PTPRF-214ENST00000496043 TCEAL6Q6IPX3 200 aa13.3□□□□□ -0.28
PTPRF-214ENST00000496043 ENOSF1Q7L5Y1 443 aa13.3□□□□□ -0.28
PTPRF-214ENST00000496043 UNC45BQ8IWX7 931 aa13.3□□□□□ -0.28
PTPRF-214ENST00000496043 MLKLQ8NB16 471 aa13.3□□□□□ -0.28
PTPRF-214ENST00000496043 TCEAL3Q969E4 200 aa13.3□□□□□ -0.28
PTPRF-214ENST00000496043 P2RY11Q96G91 374 aa13.3□□□□□ -0.28
PTPRF-214ENST00000496043 PIWIL1Q96J94 861 aaKnown RBP13.3□□□□□ -0.28
PTPRF-214ENST00000496043 KREMEN1Q96MU8 473 aa13.3□□□□□ -0.28
PTPRF-214ENST00000496043 ELOVL2Q9NXB9 296 aa13.3□□□□□ -0.28
PTPRF-214ENST00000496043 CACNA2D2Q9NY47 1150 aa13.3□□□□□ -0.28
PTPRF-214ENST00000496043 THAP10Q9P2Z0 257 aaPredicted RBP13.3□□□□□ -0.28
PTPRF-214ENST00000496043 STOML2Q9UJZ1 356 aa13.3□□□□□ -0.28
PTPRF-214ENST00000496043 STON1Q9Y6Q2 735 aa13.3□□□□□ -0.28
PTPRF-214ENST00000496043 MYO18AQ92614 2054 aaKnown RBP13.3□□□□□ -0.28
PTPRF-214ENST00000496043 ABCA7Q8IZY2 2146 aa13.3□□□□□ -0.28
PTPRF-214ENST00000496043 MYO16Q9Y6X6 1858 aa13.29□□□□□ -0.28
PTPRF-214ENST00000496043 MED7O43513 233 aa13.29□□□□□ -0.28
PTPRF-214ENST00000496043 LTFP02788 710 aa13.29□□□□□ -0.28
PTPRF-214ENST00000496043 GPD2P43304 727 aa13.29□□□□□ -0.28
PTPRF-214ENST00000496043 STARD3Q14849 445 aa13.29□□□□□ -0.28
PTPRF-214ENST00000496043 TPD52L1Q16890 204 aaPredicted RBP13.29□□□□□ -0.28
PTPRF-214ENST00000496043 GEN1Q17RS7 908 aa13.29□□□□□ -0.28
PTPRF-214ENST00000496043 KIAA1211LQ6NV74 962 aa13.29□□□□□ -0.28
PTPRF-214ENST00000496043 MSANTD2Q6P1R3 559 aa13.29□□□□□ -0.28
PTPRF-214ENST00000496043 ANKS1BQ7Z6G8 1248 aa13.29□□□□□ -0.28
PTPRF-214ENST00000496043 SYT12Q8IV01 421 aa13.29□□□□□ -0.28
PTPRF-214ENST00000496043 SCUBE3Q8IX30 993 aa13.29□□□□□ -0.28
PTPRF-214ENST00000496043 STK32AQ8WU08 396 aa13.29□□□□□ -0.28
PTPRF-214ENST00000496043 AZIN2Q96A70 460 aa13.29□□□□□ -0.28
PTPRF-214ENST00000496043 MIS12Q9H081 205 aa13.29□□□□□ -0.28
PTPRF-214ENST00000496043 CD248Q9HCU0 757 aa13.29□□□□□ -0.28
PTPRF-214ENST00000496043 ST7Q9NRC1 585 aa13.29□□□□□ -0.28
PTPRF-214ENST00000496043 CALCOCO1Q9P1Z2 691 aa13.29□□□□□ -0.28
PTPRF-214ENST00000496043 CLEC4EQ9ULY5 219 aa13.29□□□□□ -0.28
PTPRF-214ENST00000496043 RAD54BQ9Y620 910 aa13.29□□□□□ -0.28
PTPRF-214ENST00000496043 EML5Q05BV3 1969 aa13.29□□□□□ -0.28
PTPRF-214ENST00000496043 DCHS1Q96JQ0 3298 aa13.28□□□□□ -0.28
PTPRF-214ENST00000496043 KIAA1549LQ6ZVL6 1849 aa13.28□□□□□ -0.28
PTPRF-214ENST00000496043 CACNA1AO00555 2505 aa13.28□□□□□ -0.28
PTPRF-214ENST00000496043 C4orf47A7E2U8 309 aa13.28□□□□□ -0.28
PTPRF-214ENST00000496043 SART1O43290 800 aaKnown RBP13.28□□□□□ -0.28
PTPRF-214ENST00000496043 SYNCRIPO60506 623 aaKnown RBP13.28□□□□□ -0.28
PTPRF-214ENST00000496043 LETM1O95202 739 aaPredicted RBP13.28□□□□□ -0.28
PTPRF-214ENST00000496043 NDUFV2P19404 249 aa13.28□□□□□ -0.28
PTPRF-214ENST00000496043 PTGER3P43115 390 aa13.28□□□□□ -0.28
PTPRF-214ENST00000496043 RPL34P49207 117 aaKnown RBP13.28□□□□□ -0.28
PTPRF-214ENST00000496043 SLC11A2P49281 568 aa13.28□□□□□ -0.28
PTPRF-214ENST00000496043 TBX4P57082 545 aa13.28□□□□□ -0.28
PTPRF-214ENST00000496043 IRX4P78413 519 aa13.28□□□□□ -0.28
PTPRF-214ENST00000496043 RPL6Q02878 288 aaKnown RBP13.28□□□□□ -0.28
PTPRF-214ENST00000496043 ARID5AQ03989 594 aa13.28□□□□□ -0.28
PTPRF-214ENST00000496043 EIF4HQ15056 248 aaKnown RBP13.28□□□□□ -0.28
PTPRF-214ENST00000496043 DAB2IPQ5VWQ8 1189 aa13.28□□□□□ -0.28
PTPRF-214ENST00000496043 LYSMD4Q5XG99 296 aa13.28□□□□□ -0.28
PTPRF-214ENST00000496043 NUGGCQ68CJ6 796 aa13.28□□□□□ -0.28
PTPRF-214ENST00000496043 GBP6Q6ZN66 633 aa13.28□□□□□ -0.28
PTPRF-214ENST00000496043 ARMCX6Q7L4S7 300 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms