RNA–Protein interactions for RNA: ENST00000494800.1

HDAC4-211, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 451 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-211ENST00000494800 ALLCQ8N6M5 410 aa18.39■□□□□ 0.53
HDAC4-211ENST00000494800 ZNF513Q8N8E2 541 aaPredicted RBP18.39■□□□□ 0.53
HDAC4-211ENST00000494800 TXNDC5Q8NBS9 432 aaKnown RBP18.39■□□□□ 0.53
HDAC4-211ENST00000494800 DDX50Q9BQ39 737 aaKnown RBP18.39■□□□□ 0.53
HDAC4-211ENST00000494800 POLMQ9NP87 494 aaPredicted RBP18.39■□□□□ 0.53
HDAC4-211ENST00000494800 PLK2Q9NYY3 685 aa18.39■□□□□ 0.53
HDAC4-211ENST00000494800 EBF1Q9UH73 591 aa18.39■□□□□ 0.53
HDAC4-211ENST00000494800 LIMA1Q9UHB6 759 aaKnown RBP18.39■□□□□ 0.53
HDAC4-211ENST00000494800 ZFHX2Q9C0A1 2572 aaPredicted RBP18.38■□□□□ 0.53
HDAC4-211ENST00000494800 SMTNL1A8MU46 457 aa18.38■□□□□ 0.53
HDAC4-211ENST00000494800 F8VZ95 297 aa18.38■□□□□ 0.53
HDAC4-211ENST00000494800 AXIN1O15169 862 aa18.38■□□□□ 0.53
HDAC4-211ENST00000494800 ZBTB24O43167 697 aaPredicted RBP18.38■□□□□ 0.53
HDAC4-211ENST00000494800 PAPSS1O43252 624 aaPredicted RBP18.38■□□□□ 0.53
HDAC4-211ENST00000494800 RPP40O75818 363 aaKnown RBP18.38■□□□□ 0.53
HDAC4-211ENST00000494800 GLI1P08151 1106 aa18.38■□□□□ 0.53
HDAC4-211ENST00000494800 PNMA6AP0CW24 399 aaPredicted RBP18.38■□□□□ 0.53
HDAC4-211ENST00000494800 CYP11B1P15538 503 aa18.38■□□□□ 0.53
HDAC4-211ENST00000494800 KIR2DL1P43626 348 aaPredicted RBP18.38■□□□□ 0.53
HDAC4-211ENST00000494800 PXNP49023 591 aaPredicted RBP18.38■□□□□ 0.53
HDAC4-211ENST00000494800 MESP2Q0VG99 397 aa18.38■□□□□ 0.53
HDAC4-211ENST00000494800 CRY1Q16526 586 aa18.38■□□□□ 0.53
HDAC4-211ENST00000494800 ANO6Q4KMQ2 910 aa18.38■□□□□ 0.53
HDAC4-211ENST00000494800 EFHC1Q5JVL4 640 aa18.38■□□□□ 0.53
HDAC4-211ENST00000494800 ADGRF1Q5T601 910 aa18.38■□□□□ 0.53
HDAC4-211ENST00000494800 FYB2Q5VWT5 728 aa18.38■□□□□ 0.53
HDAC4-211ENST00000494800 LAIR1Q6GTX8 287 aa18.38■□□□□ 0.53
HDAC4-211ENST00000494800 TOGARAM2Q6ZUX3 1019 aa18.38■□□□□ 0.53
HDAC4-211ENST00000494800 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.38■□□□□ 0.53
HDAC4-211ENST00000494800 FAM217AQ8IXS0 508 aa18.38■□□□□ 0.53
HDAC4-211ENST00000494800 AOPEPQ8N6M6 819 aa18.38■□□□□ 0.53
HDAC4-211ENST00000494800 IL17RCQ8NAC3 791 aa18.38■□□□□ 0.53
HDAC4-211ENST00000494800 TMEM35BQ8NCS4 154 aa18.38■□□□□ 0.53
HDAC4-211ENST00000494800 MSANTD4Q8NCY6 345 aa18.38■□□□□ 0.53
HDAC4-211ENST00000494800 C1orf131Q8NDD1 294 aaKnown RBP18.38■□□□□ 0.53
HDAC4-211ENST00000494800 BPIFA3Q9BQP9 254 aa18.38■□□□□ 0.53
HDAC4-211ENST00000494800 NAA15Q9BXJ9 866 aaKnown RBP18.38■□□□□ 0.53
HDAC4-211ENST00000494800 SLC2A11Q9BYW1 496 aa18.38■□□□□ 0.53
HDAC4-211ENST00000494800 IRX2Q9BZI1 471 aaPredicted RBP18.38■□□□□ 0.53
HDAC4-211ENST00000494800 FAM207AQ9NSI2 230 aaPredicted RBP18.38■□□□□ 0.53
HDAC4-211ENST00000494800 CYTH4Q9UIA0 394 aa18.38■□□□□ 0.53
HDAC4-211ENST00000494800 STOML2Q9UJZ1 356 aa18.38■□□□□ 0.53
HDAC4-211ENST00000494800 TLR6Q9Y2C9 796 aa18.38■□□□□ 0.53
HDAC4-211ENST00000494800 STARD13Q9Y3M8 1113 aa18.38■□□□□ 0.53
HDAC4-211ENST00000494800 USP34Q70CQ2 3546 aa18.37■□□□□ 0.53
HDAC4-211ENST00000494800 TYW5A2RUC4 315 aaKnown RBP18.37■□□□□ 0.53
HDAC4-211ENST00000494800 HRO43593 1189 aa18.37■□□□□ 0.53
HDAC4-211ENST00000494800 UBXN1Q04323 297 aa18.37■□□□□ 0.53
HDAC4-211ENST00000494800 DPY19L2P1Q6NXN4 242 aa18.37■□□□□ 0.53
HDAC4-211ENST00000494800 ZDHHC17Q8IUH5 632 aa18.37■□□□□ 0.53
HDAC4-211ENST00000494800 GPR161Q8N6U8 529 aaKnown RBP18.37■□□□□ 0.53
HDAC4-211ENST00000494800 ZNF557Q8N988 423 aaPredicted RBP18.37■□□□□ 0.53
HDAC4-211ENST00000494800 NEK11Q8NG66 645 aa18.37■□□□□ 0.53
HDAC4-211ENST00000494800 DQX1Q8TE96 717 aaKnown RBP18.37■□□□□ 0.53
HDAC4-211ENST00000494800 UCMAQ8WVF2 138 aa18.37■□□□□ 0.53
HDAC4-211ENST00000494800 GAB3Q8WWW8 586 aa18.37■□□□□ 0.53
HDAC4-211ENST00000494800 AZIN2Q96A70 460 aa18.37■□□□□ 0.53
HDAC4-211ENST00000494800 TMA16Q96EY4 203 aaKnown RBP18.37■□□□□ 0.53
HDAC4-211ENST00000494800 SPAG5Q96R06 1193 aa18.37■□□□□ 0.53
HDAC4-211ENST00000494800 CPXM1Q96SM3 734 aa18.37■□□□□ 0.53
HDAC4-211ENST00000494800 ASNSD1Q9NWL6 643 aa18.37■□□□□ 0.53
HDAC4-211ENST00000494800 NAALADL1Q9UQQ1 740 aa18.37■□□□□ 0.53
HDAC4-211ENST00000494800 SLC27A6Q9Y2P4 619 aa18.37■□□□□ 0.53
HDAC4-211ENST00000494800 VPS13AQ96RL7 3174 aa18.37■□□□□ 0.53
HDAC4-211ENST00000494800 LGALS16A8MUM7 142 aa18.36■□□□□ 0.53
HDAC4-211ENST00000494800 IRAK2O43187 625 aa18.36■□□□□ 0.53
HDAC4-211ENST00000494800 HSF2BPO75031 334 aa18.36■□□□□ 0.53
HDAC4-211ENST00000494800 IGLV3-27P01718 113 aa18.36■□□□□ 0.53
HDAC4-211ENST00000494800 APOEP02649 317 aa18.36■□□□□ 0.53
HDAC4-211ENST00000494800 NTSR1P30989 418 aa18.36■□□□□ 0.53
HDAC4-211ENST00000494800 GBP1P32455 592 aa18.36■□□□□ 0.53
HDAC4-211ENST00000494800 POLR2FP61218 127 aaKnown RBP18.36■□□□□ 0.53
HDAC4-211ENST00000494800 KLHL40Q2TBA0 621 aa18.36■□□□□ 0.53
HDAC4-211ENST00000494800 EMC10Q5UCC4 262 aa18.36■□□□□ 0.53
HDAC4-211ENST00000494800 OR6B2Q6IFH4 312 aa18.36■□□□□ 0.53
HDAC4-211ENST00000494800 CACNA2D4Q7Z3S7 1137 aa18.36■□□□□ 0.53
HDAC4-211ENST00000494800 ANKS1BQ7Z6G8 1248 aa18.36■□□□□ 0.53
HDAC4-211ENST00000494800 C11orf74Q86VG3 221 aa18.36■□□□□ 0.53
HDAC4-211ENST00000494800 ZNF677Q86XU0 584 aa18.36■□□□□ 0.53
HDAC4-211ENST00000494800 SFTPA1Q8IWL2 248 aa18.36■□□□□ 0.53
HDAC4-211ENST00000494800 FANCMQ8IYD8 2048 aa18.36■□□□□ 0.53
HDAC4-211ENST00000494800 CHPFQ8IZ52 775 aa18.36■□□□□ 0.53
HDAC4-211ENST00000494800 WDTC1Q8N5D0 677 aa18.36■□□□□ 0.53
HDAC4-211ENST00000494800 POLR3BQ9NW08 1133 aaPredicted RBP18.36■□□□□ 0.53
HDAC4-211ENST00000494800 BCCIPQ9P287 314 aaKnown RBP eCLIP18.36■□□□□ 0.53
HDAC4-211ENST00000494800 FBXO10Q9UK96 956 aa18.36■□□□□ 0.53
HDAC4-211ENST00000494800 LRRC10BA6NIK2 292 aa18.35■□□□□ 0.53
HDAC4-211ENST00000494800 SGK1O00141 431 aa18.35■□□□□ 0.53
HDAC4-211ENST00000494800 NPC1O15118 1278 aa18.35■□□□□ 0.53
HDAC4-211ENST00000494800 TRIM24O15164 1050 aa18.35■□□□□ 0.53
HDAC4-211ENST00000494800 ACSL4O60488 711 aa18.35■□□□□ 0.53
HDAC4-211ENST00000494800 LSM8O95777 96 aaKnown RBP18.35■□□□□ 0.53
HDAC4-211ENST00000494800 FYNP06241 537 aa18.35■□□□□ 0.53
HDAC4-211ENST00000494800 CISD3P0C7P0 127 aa18.35■□□□□ 0.53
HDAC4-211ENST00000494800 ZNF18P17022 549 aa18.35■□□□□ 0.53
HDAC4-211ENST00000494800 CDK17Q00537 523 aa18.35■□□□□ 0.53
HDAC4-211ENST00000494800 SRSF5Q13243 272 aaKnown RBP18.35■□□□□ 0.53
HDAC4-211ENST00000494800 SYCP1Q15431 976 aa18.35■□□□□ 0.53
HDAC4-211ENST00000494800 LPAL2Q16609 132 aa18.35■□□□□ 0.53
HDAC4-211ENST00000494800 USP39Q53GS9 565 aaKnown RBP18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms