RNA–Protein interactions for RNA: ENST00000494503.1

UBR4-216, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-216ENST00000494503 HOXB3P14651 431 aaPredicted RBP10.1□□□□□ -0.79
UBR4-216ENST00000494503 TPMTP51580 245 aa10.1□□□□□ -0.79
UBR4-216ENST00000494503 KIF11P52732 1056 aa10.1□□□□□ -0.79
UBR4-216ENST00000494503 MFAP3P55082 362 aa10.1□□□□□ -0.79
UBR4-216ENST00000494503 INCA1Q0VD86 236 aa10.1□□□□□ -0.79
UBR4-216ENST00000494503 ZNF234Q14588 700 aa10.1□□□□□ -0.79
UBR4-216ENST00000494503 FNDC3BQ53EP0 1204 aaKnown RBP10.1□□□□□ -0.79
UBR4-216ENST00000494503 KLHDC10Q6PID8 442 aa10.1□□□□□ -0.79
UBR4-216ENST00000494503 C19orf48Q6RUI8 117 aa10.1□□□□□ -0.79
UBR4-216ENST00000494503 Q6ZNB5 142 aa10.1□□□□□ -0.79
UBR4-216ENST00000494503 INTS8Q75QN2 995 aaKnown RBP10.1□□□□□ -0.79
UBR4-216ENST00000494503 CCDC186Q7Z3E2 898 aa10.1□□□□□ -0.79
UBR4-216ENST00000494503 ARHGAP18Q8N392 663 aa10.1□□□□□ -0.79
UBR4-216ENST00000494503 EEF2KMTQ96G04 330 aa10.1□□□□□ -0.79
UBR4-216ENST00000494503 ZNF419Q96HQ0 510 aaPredicted RBP10.1□□□□□ -0.79
UBR4-216ENST00000494503 ARID3AQ99856 593 aa10.1□□□□□ -0.79
UBR4-216ENST00000494503 DUSP9Q99956 384 aaKnown RBP10.1□□□□□ -0.79
UBR4-216ENST00000494503 DUSP16Q9BY84 665 aa10.1□□□□□ -0.79
UBR4-216ENST00000494503 BACH2Q9BYV9 841 aa10.1□□□□□ -0.79
UBR4-216ENST00000494503 DCLK3Q9C098 648 aa10.1□□□□□ -0.79
UBR4-216ENST00000494503 MKRN2Q9H000 416 aaKnown RBP10.1□□□□□ -0.79
UBR4-216ENST00000494503 KCTD10Q9H3F6 313 aa10.1□□□□□ -0.79
UBR4-216ENST00000494503 GAREM1Q9H706 876 aa10.1□□□□□ -0.79
UBR4-216ENST00000494503 CYP3A43Q9HB55 503 aa10.1□□□□□ -0.79
UBR4-216ENST00000494503 APOBEC3GQ9HC16 384 aaKnown RBP10.1□□□□□ -0.79
UBR4-216ENST00000494503 PNPLA8Q9NP80 782 aa10.1□□□□□ -0.79
UBR4-216ENST00000494503 DNAAF2Q9NVR5 837 aaKnown RBP10.1□□□□□ -0.79
UBR4-216ENST00000494503 DMAC2Q9NW81 257 aa10.1□□□□□ -0.79
UBR4-216ENST00000494503 EIF2B4Q9UI10 523 aaKnown RBP10.1□□□□□ -0.79
UBR4-216ENST00000494503 APOBEC2Q9Y235 224 aaKnown RBP10.1□□□□□ -0.79
UBR4-216ENST00000494503 SPEGQ15772 3267 aa10.1□□□□□ -0.79
UBR4-216ENST00000494503 DSPP15924 2871 aaKnown RBP10.1□□□□□ -0.79
UBR4-216ENST00000494503 CABIN1Q9Y6J0 2220 aa10.1□□□□□ -0.79
UBR4-216ENST00000494503 CKAP5Q14008 2032 aa10.09□□□□□ -0.79
UBR4-216ENST00000494503 TMEM131Q92545 1883 aa10.09□□□□□ -0.79
UBR4-216ENST00000494503 BCAT2O15382 392 aaPredicted RBP10.09□□□□□ -0.79
UBR4-216ENST00000494503 CILPO75339 1184 aa10.09□□□□□ -0.79
UBR4-216ENST00000494503 KLKB1P03952 638 aa10.09□□□□□ -0.79
UBR4-216ENST00000494503 PRR29P0C7W0 189 aa10.09□□□□□ -0.79
UBR4-216ENST00000494503 HLA-EP13747 358 aa10.09□□□□□ -0.79
UBR4-216ENST00000494503 PRKCHP24723 683 aa10.09□□□□□ -0.79
UBR4-216ENST00000494503 RPL13P26373 211 aaKnown RBP10.09□□□□□ -0.79
UBR4-216ENST00000494503 OXTRP30559 389 aa10.09□□□□□ -0.79
UBR4-216ENST00000494503 PSMC2P35998 433 aaKnown RBP10.09□□□□□ -0.79
UBR4-216ENST00000494503 MATKP42679 507 aa10.09□□□□□ -0.79
UBR4-216ENST00000494503 SYKP43405 635 aa10.09□□□□□ -0.79
UBR4-216ENST00000494503 TKTL1P51854 596 aa10.09□□□□□ -0.79
UBR4-216ENST00000494503 YWHAGP61981 247 aaKnown RBP eCLIP10.09□□□□□ -0.79
UBR4-216ENST00000494503 PPP3CAQ08209 521 aa10.09□□□□□ -0.79
UBR4-216ENST00000494503 SCAPQ12770 1279 aa10.09□□□□□ -0.79
UBR4-216ENST00000494503 SLC14A1Q13336 389 aa10.09□□□□□ -0.79
UBR4-216ENST00000494503 PKP1Q13835 747 aa10.09□□□□□ -0.79
UBR4-216ENST00000494503 E2F5Q15329 346 aa10.09□□□□□ -0.79
UBR4-216ENST00000494503 DCAF17Q5H9S7 520 aaPredicted RBP10.09□□□□□ -0.79
UBR4-216ENST00000494503 TCERG1LQ5VWI1 586 aa10.09□□□□□ -0.79
UBR4-216ENST00000494503 FYB2Q5VWT5 728 aa10.09□□□□□ -0.79
UBR4-216ENST00000494503 ADAT2Q7Z6V5 191 aaKnown RBP10.09□□□□□ -0.79
UBR4-216ENST00000494503 SCD5Q86SK9 330 aa10.09□□□□□ -0.79
UBR4-216ENST00000494503 ZNF366Q8N895 744 aa10.09□□□□□ -0.79
UBR4-216ENST00000494503 GANCQ8TET4 914 aa10.09□□□□□ -0.79
UBR4-216ENST00000494503 RNF139Q8WU17 664 aa10.09□□□□□ -0.79
UBR4-216ENST00000494503 SPATA32Q96LK8 384 aa10.09□□□□□ -0.79
UBR4-216ENST00000494503 IPO9Q96P70 1041 aaKnown RBP10.09□□□□□ -0.79
UBR4-216ENST00000494503 ZDHHC5Q9C0B5 715 aa10.09□□□□□ -0.79
UBR4-216ENST00000494503 IL21RQ9HBE5 538 aa10.09□□□□□ -0.79
UBR4-216ENST00000494503 LRRC4Q9HBW1 653 aa10.09□□□□□ -0.79
UBR4-216ENST00000494503 ELOVL2Q9NXB9 296 aa10.09□□□□□ -0.79
UBR4-216ENST00000494503 WSB2Q9NYS7 404 aaPredicted RBP10.09□□□□□ -0.79
UBR4-216ENST00000494503 AGO1Q9UL18 857 aaKnown RBP10.09□□□□□ -0.79
UBR4-216ENST00000494503 FASNP49327 2511 aaKnown RBP10.09□□□□□ -0.79
UBR4-216ENST00000494503 KCNJ18B7U540 433 aa10.08□□□□□ -0.8
UBR4-216ENST00000494503 NPC1O15118 1278 aa10.08□□□□□ -0.8
UBR4-216ENST00000494503 PENKP01210 267 aaPredicted RBP10.08□□□□□ -0.8
UBR4-216ENST00000494503 CD19P15391 556 aa10.08□□□□□ -0.8
UBR4-216ENST00000494503 HARS2P49590 506 aaKnown RBP10.08□□□□□ -0.8
UBR4-216ENST00000494503 MXI1P50539 228 aa10.08□□□□□ -0.8
UBR4-216ENST00000494503 ADAM9Q13443 819 aa10.08□□□□□ -0.8
UBR4-216ENST00000494503 GOLGA7BQ2TAP0 167 aa10.08□□□□□ -0.8
UBR4-216ENST00000494503 C1orf220Q5T0J3 134 aa10.08□□□□□ -0.8
UBR4-216ENST00000494503 KRT39Q6A163 491 aa10.08□□□□□ -0.8
UBR4-216ENST00000494503 ATL3Q6DD88 541 aa10.08□□□□□ -0.8
UBR4-216ENST00000494503 IL27RAQ6UWB1 636 aa10.08□□□□□ -0.8
UBR4-216ENST00000494503 LRSAM1Q6UWE0 723 aa10.08□□□□□ -0.8
UBR4-216ENST00000494503 RAB44Q7Z6P3 723 aaPredicted RBP10.08□□□□□ -0.8
UBR4-216ENST00000494503 PIGZQ86VD9 579 aa10.08□□□□□ -0.8
UBR4-216ENST00000494503 FMNL3Q8IVF7 1028 aa10.08□□□□□ -0.8
UBR4-216ENST00000494503 SIX6OS1Q8N1H7 587 aa10.08□□□□□ -0.8
UBR4-216ENST00000494503 RHBDD1Q8TEB9 315 aa10.08□□□□□ -0.8
UBR4-216ENST00000494503 CYB5D2Q8WUJ1 264 aa10.08□□□□□ -0.8
UBR4-216ENST00000494503 NDRG1Q92597 394 aaKnown RBP10.08□□□□□ -0.8
UBR4-216ENST00000494503 EDEM1Q92611 657 aa10.08□□□□□ -0.8
UBR4-216ENST00000494503 NUP58Q9BVL2 599 aa10.08□□□□□ -0.8
UBR4-216ENST00000494503 CCDC86Q9H6F5 360 aaKnown RBP10.08□□□□□ -0.8
UBR4-216ENST00000494503 TMEM8AQ9HCN3 771 aa10.08□□□□□ -0.8
UBR4-216ENST00000494503 CD248Q9HCU0 757 aa10.08□□□□□ -0.8
UBR4-216ENST00000494503 ITM2CQ9NQX7 267 aa10.08□□□□□ -0.8
UBR4-216ENST00000494503 TM7SF3Q9NS93 570 aa10.08□□□□□ -0.8
UBR4-216ENST00000494503 CISHQ9NSE2 258 aa10.08□□□□□ -0.8
UBR4-216ENST00000494503 CLIC5Q9NZA1 410 aa10.08□□□□□ -0.8
UBR4-216ENST00000494503 USP36Q9P275 1121 aaKnown RBP10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms