RNA–Protein interactions for RNA: ENST00000494248.1

PTPN12-212, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 470 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-212ENST00000494248 GCATO75600 419 aa2.5□□□□□ -2.01
PTPN12-212ENST00000494248 PLGP00747 810 aaPredicted RBP2.5□□□□□ -2.01
PTPN12-212ENST00000494248 IGKV3-20P01619 116 aa2.5□□□□□ -2.01
PTPN12-212ENST00000494248 A1BGP04217 495 aa2.5□□□□□ -2.01
PTPN12-212ENST00000494248 IFIT1P09914 478 aaKnown RBP2.5□□□□□ -2.01
PTPN12-212ENST00000494248 T-ENOLP0DO92 83 aa2.5□□□□□ -2.01
PTPN12-212ENST00000494248 MYBL2P10244 700 aa2.5□□□□□ -2.01
PTPN12-212ENST00000494248 PF4V1P10720 104 aa2.5□□□□□ -2.01
PTPN12-212ENST00000494248 CYP19A1P11511 503 aaPredicted RBP2.5□□□□□ -2.01
PTPN12-212ENST00000494248 MYCLP12524 364 aaPredicted RBP2.5□□□□□ -2.01
PTPN12-212ENST00000494248 GYS1P13807 737 aa2.5□□□□□ -2.01
PTPN12-212ENST00000494248 RPL17P18621 184 aaKnown RBP2.5□□□□□ -2.01
PTPN12-212ENST00000494248 VCAM1P19320 739 aa2.5□□□□□ -2.01
PTPN12-212ENST00000494248 CASQ1P31415 396 aa2.5□□□□□ -2.01
PTPN12-212ENST00000494248 KIF5BP33176 963 aa2.5□□□□□ -2.01
PTPN12-212ENST00000494248 CTNNA1P35221 906 aaKnown RBP2.5□□□□□ -2.01
PTPN12-212ENST00000494248 HOXD12P35452 270 aa2.5□□□□□ -2.01
PTPN12-212ENST00000494248 ANP32AP39687 249 aaKnown RBP2.5□□□□□ -2.01
PTPN12-212ENST00000494248 RECQLP46063 649 aaPredicted RBP2.5□□□□□ -2.01
PTPN12-212ENST00000494248 ME1P48163 572 aa2.5□□□□□ -2.01
PTPN12-212ENST00000494248 TM4SF4P48230 202 aa2.5□□□□□ -2.01
PTPN12-212ENST00000494248 KRTAP10-3P60369 221 aa2.5□□□□□ -2.01
PTPN12-212ENST00000494248 MPP1Q00013 466 aa2.5□□□□□ -2.01
PTPN12-212ENST00000494248 PLIN5Q00G26 463 aa2.5□□□□□ -2.01
PTPN12-212ENST00000494248 DSC2Q02487 901 aa2.5□□□□□ -2.01
PTPN12-212ENST00000494248 PPFIA1Q13136 1202 aa2.5□□□□□ -2.01
PTPN12-212ENST00000494248 INAVAQ3KP66 663 aa2.5□□□□□ -2.01
PTPN12-212ENST00000494248 CCDC157Q569K6 752 aa2.5□□□□□ -2.01
PTPN12-212ENST00000494248 HSP90AB3PQ58FF7 597 aa2.5□□□□□ -2.01
PTPN12-212ENST00000494248 DNAJC21Q5F1R6 531 aaKnown RBP2.5□□□□□ -2.01
PTPN12-212ENST00000494248 C9orf50Q5SZB4 431 aa2.5□□□□□ -2.01
PTPN12-212ENST00000494248 CC2D1BQ5T0F9 858 aaKnown RBP2.5□□□□□ -2.01
PTPN12-212ENST00000494248 ARHGAP40Q5TG30 622 aa2.5□□□□□ -2.01
PTPN12-212ENST00000494248 LMBRD2Q68DH5 695 aaPredicted RBP2.5□□□□□ -2.01
PTPN12-212ENST00000494248 RETSATQ6NUM9 610 aa2.5□□□□□ -2.01
PTPN12-212ENST00000494248 HIBCHQ6NVY1 386 aaPredicted RBP2.5□□□□□ -2.01
PTPN12-212ENST00000494248 TLDC1Q6P9B6 456 aa2.5□□□□□ -2.01
PTPN12-212ENST00000494248 C4orf50Q6ZRC1 276 aa2.5□□□□□ -2.01
PTPN12-212ENST00000494248 CCDC129Q6ZRS4 1044 aa2.5□□□□□ -2.01
PTPN12-212ENST00000494248 FASTKD5Q7L8L6 764 aaKnown RBP2.5□□□□□ -2.01
PTPN12-212ENST00000494248 CHST15Q7LFX5 561 aaPredicted RBP2.5□□□□□ -2.01
PTPN12-212ENST00000494248 FAM90A1Q86YD7 464 aa2.5□□□□□ -2.01
PTPN12-212ENST00000494248 ERC1Q8IUD2 1116 aa2.5□□□□□ -2.01
PTPN12-212ENST00000494248 ANKRD18AQ8IVF6 992 aa2.5□□□□□ -2.01
PTPN12-212ENST00000494248 C16orf71Q8IYS4 520 aaPredicted RBP2.5□□□□□ -2.01
PTPN12-212ENST00000494248 MIER2Q8N344 545 aa2.5□□□□□ -2.01
PTPN12-212ENST00000494248 ZNF713Q8N859 430 aaPredicted RBP2.5□□□□□ -2.01
PTPN12-212ENST00000494248 LSMEM1Q8N8F7 131 aa2.5□□□□□ -2.01
PTPN12-212ENST00000494248 ZFPM2Q8WW38 1151 aa2.5□□□□□ -2.01
PTPN12-212ENST00000494248 HDAC2Q92769 488 aaKnown RBP2.5□□□□□ -2.01
PTPN12-212ENST00000494248 CENPTQ96BT3 561 aa2.5□□□□□ -2.01
PTPN12-212ENST00000494248 R3HDM4Q96D70 268 aa2.5□□□□□ -2.01
PTPN12-212ENST00000494248 VMP1Q96GC9 406 aa2.5□□□□□ -2.01
PTPN12-212ENST00000494248 CFAP53Q96M91 514 aa2.5□□□□□ -2.01
PTPN12-212ENST00000494248 ZMAT2Q96NC0 199 aaKnown RBP2.5□□□□□ -2.01
PTPN12-212ENST00000494248 NUP88Q99567 741 aaPredicted RBP2.5□□□□□ -2.01
PTPN12-212ENST00000494248 NUDT16L1Q9BRJ7 211 aaKnown RBP2.5□□□□□ -2.01
PTPN12-212ENST00000494248 C1orf43Q9BWL3 253 aa2.5□□□□□ -2.01
PTPN12-212ENST00000494248 NAA15Q9BXJ9 866 aaKnown RBP2.5□□□□□ -2.01
PTPN12-212ENST00000494248 MRPL9Q9BYD2 267 aaKnown RBP2.5□□□□□ -2.01
PTPN12-212ENST00000494248 CIPCQ9C0C6 399 aa2.5□□□□□ -2.01
PTPN12-212ENST00000494248 TTYH3Q9C0H2 523 aa2.5□□□□□ -2.01
PTPN12-212ENST00000494248 MRPL46Q9H2W6 279 aaKnown RBP2.5□□□□□ -2.01
PTPN12-212ENST00000494248 PRKRIP1Q9H875 184 aaPredicted RBP2.5□□□□□ -2.01
PTPN12-212ENST00000494248 AGO4Q9HCK5 861 aaKnown RBP2.5□□□□□ -2.01
PTPN12-212ENST00000494248 C1orf112Q9NSG2 853 aa2.5□□□□□ -2.01
PTPN12-212ENST00000494248 SMC4Q9NTJ3 1288 aa2.5□□□□□ -2.01
PTPN12-212ENST00000494248 ARGLU1Q9NWB6 273 aaPredicted RBP2.5□□□□□ -2.01
PTPN12-212ENST00000494248 HEY2Q9UBP5 337 aa2.5□□□□□ -2.01
PTPN12-212ENST00000494248 XPO7Q9UIA9 1087 aaKnown RBP2.5□□□□□ -2.01
PTPN12-212ENST00000494248 SHOC2Q9UQ13 582 aa2.5□□□□□ -2.01
PTPN12-212ENST00000494248 SSX2IPQ9Y2D8 614 aa2.5□□□□□ -2.01
PTPN12-212ENST00000494248 MAGED1Q9Y5V3 778 aaPredicted RBP2.5□□□□□ -2.01
PTPN12-212ENST00000494248 ZMYM2Q9UBW7 1377 aa2.49□□□□□ -2.01
PTPN12-212ENST00000494248 TCRBV5S1A1TA0A578 114 aa2.49□□□□□ -2.01
PTPN12-212ENST00000494248 BTBD19C9JJ37 291 aa2.49□□□□□ -2.01
PTPN12-212ENST00000494248 MYO1CO00159 1063 aa2.49□□□□□ -2.01
PTPN12-212ENST00000494248 PSMD9O00233 223 aa2.49□□□□□ -2.01
PTPN12-212ENST00000494248 AREL1O15033 823 aa2.49□□□□□ -2.01
PTPN12-212ENST00000494248 NCAM2O15394 837 aa2.49□□□□□ -2.01
PTPN12-212ENST00000494248 RNF8O76064 485 aa2.49□□□□□ -2.01
PTPN12-212ENST00000494248 PDE8BO95263 885 aa2.49□□□□□ -2.01
PTPN12-212ENST00000494248 DDX58O95786 925 aaKnown RBP2.49□□□□□ -2.01
PTPN12-212ENST00000494248 MT-CO1P00395 513 aa2.49□□□□□ -2.01
PTPN12-212ENST00000494248 RHCEP18577 417 aa2.49□□□□□ -2.01
PTPN12-212ENST00000494248 GALNSP34059 522 aa2.49□□□□□ -2.01
PTPN12-212ENST00000494248 SSR1P43307 286 aaKnown RBP2.49□□□□□ -2.01
PTPN12-212ENST00000494248 TNNT2P45379 298 aaPredicted RBP2.49□□□□□ -2.01
PTPN12-212ENST00000494248 COPAP53621 1224 aa2.49□□□□□ -2.01
PTPN12-212ENST00000494248 ADKP55263 362 aaKnown RBP2.49□□□□□ -2.01
PTPN12-212ENST00000494248 LOXL3P58215 753 aa2.49□□□□□ -2.01
PTPN12-212ENST00000494248 BPIFB3P59826 476 aa2.49□□□□□ -2.01
PTPN12-212ENST00000494248 KRTAP10-8P60410 259 aa2.49□□□□□ -2.01
PTPN12-212ENST00000494248 KRT85P78386 507 aa2.49□□□□□ -2.01
PTPN12-212ENST00000494248 G3BP1Q13283 466 aaKnown RBP eCLIP2.49□□□□□ -2.01
PTPN12-212ENST00000494248 TRIM29Q14134 588 aa2.49□□□□□ -2.01
PTPN12-212ENST00000494248 BOP1Q14137 746 aaKnown RBP2.49□□□□□ -2.01
PTPN12-212ENST00000494248 TRIM14Q14142 442 aa2.49□□□□□ -2.01
PTPN12-212ENST00000494248 PSMD6Q15008 389 aa2.49□□□□□ -2.01
PTPN12-212ENST00000494248 FAM187BQ17R55 369 aa2.49□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms