RNA–Protein interactions for RNA: ENST00000494090.6

COL27A1-207, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 5,329 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-207ENST00000494090 PECAM1P16284 738 aaPredicted RBP19.66■□□□□ 0.74
COL27A1-207ENST00000494090 SLC22A9Q8IVM8 553 aa19.66■□□□□ 0.74
COL27A1-207ENST00000494090 ZNF786Q8N393 782 aa19.66■□□□□ 0.74
COL27A1-207ENST00000494090 APOPT1Q96IL0 206 aa19.66■□□□□ 0.74
COL27A1-207ENST00000494090 AP4S1Q9Y587 144 aa19.66■□□□□ 0.74
COL27A1-207ENST00000494090 GPC1P35052 558 aa19.65■□□□□ 0.74
COL27A1-207ENST00000494090 PEX5P50542 639 aa19.65■□□□□ 0.74
COL27A1-207ENST00000494090 IFI35P80217 286 aaPredicted RBP19.65■□□□□ 0.74
COL27A1-207ENST00000494090 TMPRSS6Q8IU80 811 aa19.65■□□□□ 0.74
COL27A1-207ENST00000494090 VANGL2Q9ULK5 521 aa19.65■□□□□ 0.74
COL27A1-207ENST00000494090 PCDHB5Q9Y5E4 795 aa19.65■□□□□ 0.74
COL27A1-207ENST00000494090 JCHAINP01591 159 aa19.65■□□□□ 0.74
COL27A1-207ENST00000494090 KCNK18Q7Z418 384 aa19.65■□□□□ 0.74
COL27A1-207ENST00000494090 C11orf96Q7Z7L8 435 aa19.65■□□□□ 0.74
COL27A1-207ENST00000494090 FICDQ9BVA6 458 aa19.65■□□□□ 0.74
COL27A1-207ENST00000494090 DNAJC18Q9H819 358 aa19.65■□□□□ 0.74
COL27A1-207ENST00000494090 A0A087WZ62 844 aa19.65■□□□□ 0.74
COL27A1-207ENST00000494090 UBXN8O00124 270 aa19.65■□□□□ 0.74
COL27A1-207ENST00000494090 TPST1O60507 370 aa19.65■□□□□ 0.74
COL27A1-207ENST00000494090 RRM2P31350 389 aa19.65■□□□□ 0.74
COL27A1-207ENST00000494090 CCR1P32246 355 aa19.65■□□□□ 0.74
COL27A1-207ENST00000494090 HIC2Q96JB3 615 aa19.65■□□□□ 0.74
COL27A1-207ENST00000494090 FDXACB1Q9BRP7 624 aaPredicted RBP19.65■□□□□ 0.74
COL27A1-207ENST00000494090 SPATA31D1Q6ZQQ2 1576 aa19.65■□□□□ 0.74
COL27A1-207ENST00000494090 E9PBE3 544 aa19.65■□□□□ 0.74
COL27A1-207ENST00000494090 SYNCRIPO60506 623 aaKnown RBP19.65■□□□□ 0.74
COL27A1-207ENST00000494090 KLHL41O60662 606 aa19.65■□□□□ 0.74
COL27A1-207ENST00000494090 CSE1LP55060 971 aaKnown RBP19.65■□□□□ 0.74
COL27A1-207ENST00000494090 MRPS15P82914 257 aaKnown RBP19.65■□□□□ 0.74
COL27A1-207ENST00000494090 ZPBP2Q6X784 338 aa19.65■□□□□ 0.74
COL27A1-207ENST00000494090 CHMP1BQ7LBR1 199 aa19.65■□□□□ 0.74
COL27A1-207ENST00000494090 CCDC60Q8IWA6 550 aaPredicted RBP19.65■□□□□ 0.74
COL27A1-207ENST00000494090 TCP10LQ8TDR4 215 aa19.65■□□□□ 0.74
COL27A1-207ENST00000494090 SYT15Q9BQS2 421 aa19.65■□□□□ 0.74
COL27A1-207ENST00000494090 TMCC3Q9ULS5 477 aa19.65■□□□□ 0.74
COL27A1-207ENST00000494090 SNX13Q9Y5W8 968 aa19.65■□□□□ 0.74
COL27A1-207ENST00000494090 MROH2AA6NES4 1674 aa19.65■□□□□ 0.74
COL27A1-207ENST00000494090 ZNF135P52742 658 aaPredicted RBP19.64■□□□□ 0.74
COL27A1-207ENST00000494090 MAP3K7CLP57077 242 aa19.64■□□□□ 0.74
COL27A1-207ENST00000494090 CCDC153Q494R4 210 aa19.64■□□□□ 0.74
COL27A1-207ENST00000494090 FUT11Q495W5 492 aa19.64■□□□□ 0.74
COL27A1-207ENST00000494090 PREPLQ4J6C6 727 aaPredicted RBP19.64■□□□□ 0.74
COL27A1-207ENST00000494090 CYP4Z1Q86W10 505 aa19.64■□□□□ 0.74
COL27A1-207ENST00000494090 MAP4K3Q8IVH8 894 aa19.64■□□□□ 0.74
COL27A1-207ENST00000494090 TSEN2Q8NCE0 465 aaKnown RBP19.64■□□□□ 0.74
COL27A1-207ENST00000494090 CASP10Q92851 521 aa19.64■□□□□ 0.74
COL27A1-207ENST00000494090 MRPL9Q9BYD2 267 aaKnown RBP19.64■□□□□ 0.74
COL27A1-207ENST00000494090 PLA2G4CQ9UP65 541 aa19.64■□□□□ 0.74
COL27A1-207ENST00000494090 DARSP14868 501 aaKnown RBP19.64■□□□□ 0.73
COL27A1-207ENST00000494090 TKTL1P51854 596 aa19.64■□□□□ 0.73
COL27A1-207ENST00000494090 CHRNB3Q05901 458 aa19.64■□□□□ 0.73
COL27A1-207ENST00000494090 DDX39BQ13838 428 aaKnown RBP19.64■□□□□ 0.73
COL27A1-207ENST00000494090 GRTP1Q5TC63 336 aa19.64■□□□□ 0.73
COL27A1-207ENST00000494090 ANKS6Q68DC2 871 aa19.64■□□□□ 0.73
COL27A1-207ENST00000494090 LZTR1Q8N653 840 aa19.64■□□□□ 0.73
COL27A1-207ENST00000494090 SIKE1Q9BRV8 207 aa19.64■□□□□ 0.73
COL27A1-207ENST00000494090 ADGRA3Q8IWK6 1321 aa19.64■□□□□ 0.73
COL27A1-207ENST00000494090 PAEPP09466 180 aa19.64■□□□□ 0.73
COL27A1-207ENST00000494090 MFSD7Q6UXD7 560 aa19.64■□□□□ 0.73
COL27A1-207ENST00000494090 GPR141Q7Z602 305 aa19.64■□□□□ 0.73
COL27A1-207ENST00000494090 MAN1C1Q9NR34 630 aa19.64■□□□□ 0.73
COL27A1-207ENST00000494090 TSPAN16Q9UKR8 245 aa19.64■□□□□ 0.73
COL27A1-207ENST00000494090 SERPINE1P05121 402 aa19.64■□□□□ 0.73
COL27A1-207ENST00000494090 NFIL3Q16649 462 aa19.64■□□□□ 0.73
COL27A1-207ENST00000494090 CBWD6Q4V339 395 aa19.64■□□□□ 0.73
COL27A1-207ENST00000494090 CBWD3Q5JTY5 395 aa19.64■□□□□ 0.73
COL27A1-207ENST00000494090 CBWD5Q5RIA9 395 aa19.64■□□□□ 0.73
COL27A1-207ENST00000494090 ZNF662Q6ZS27 426 aa19.64■□□□□ 0.73
COL27A1-207ENST00000494090 ZNF410Q86VK4 478 aa19.64■□□□□ 0.73
COL27A1-207ENST00000494090 KIAA2013Q8IYS2 634 aa19.64■□□□□ 0.73
COL27A1-207ENST00000494090 MRPL48Q96GC5 212 aaKnown RBP19.64■□□□□ 0.73
COL27A1-207ENST00000494090 BTBD10Q9BSF8 475 aa19.64■□□□□ 0.73
COL27A1-207ENST00000494090 PRRG3Q9BZD7 231 aa19.64■□□□□ 0.73
COL27A1-207ENST00000494090 PRKD2Q9BZL6 878 aa19.64■□□□□ 0.73
COL27A1-207ENST00000494090 EML1O00423 815 aa19.63■□□□□ 0.73
COL27A1-207ENST00000494090 KHDRBS1Q07666 443 aaKnown RBP eCLIP19.63■□□□□ 0.73
COL27A1-207ENST00000494090 CDC16Q13042 620 aa19.63■□□□□ 0.73
COL27A1-207ENST00000494090 ACAP1Q15027 740 aa19.63■□□□□ 0.73
COL27A1-207ENST00000494090 SOCS4Q8WXH5 440 aa19.63■□□□□ 0.73
COL27A1-207ENST00000494090 APOL2Q9BQE5 337 aa19.63■□□□□ 0.73
COL27A1-207ENST00000494090 CTNNAL1Q9UBT7 734 aa19.63■□□□□ 0.73
COL27A1-207ENST00000494090 OVOS1Q6IE37 1185 aa19.63■□□□□ 0.73
COL27A1-207ENST00000494090 KATNAL2Q8IYT4 538 aa19.63■□□□□ 0.73
COL27A1-207ENST00000494090 MICU2Q8IYU8 434 aa19.63■□□□□ 0.73
COL27A1-207ENST00000494090 ZCCHC9Q8N567 271 aaKnown RBP19.63■□□□□ 0.73
COL27A1-207ENST00000494090 DCCP43146 1447 aa19.63■□□□□ 0.73
COL27A1-207ENST00000494090 CHI3L1P36222 383 aaPredicted RBP19.63■□□□□ 0.73
COL27A1-207ENST00000494090 NR2C2P49116 596 aa19.63■□□□□ 0.73
COL27A1-207ENST00000494090 PAN2Q504Q3 1202 aaKnown RBP19.63■□□□□ 0.73
COL27A1-207ENST00000494090 N4BP2L1Q5TBK1 243 aaPredicted RBP19.63■□□□□ 0.73
COL27A1-207ENST00000494090 IDI2Q9BXS1 227 aa19.63■□□□□ 0.73
COL27A1-207ENST00000494090 GPAMQ9HCL2 828 aa19.63■□□□□ 0.73
COL27A1-207ENST00000494090 CYP4F12Q9HCS2 524 aa19.63■□□□□ 0.73
COL27A1-207ENST00000494090 SYNPO2Q9UMS6 1093 aa19.63■□□□□ 0.73
COL27A1-207ENST00000494090 ARHGEF28Q8N1W1 1705 aaKnown RBP19.63■□□□□ 0.73
COL27A1-207ENST00000494090 PLA2G6O60733 806 aa19.63■□□□□ 0.73
COL27A1-207ENST00000494090 ATP5BP06576 529 aaKnown RBP19.63■□□□□ 0.73
COL27A1-207ENST00000494090 SLC1A6P48664 564 aa19.63■□□□□ 0.73
COL27A1-207ENST00000494090 NUP107P57740 925 aa19.63■□□□□ 0.73
COL27A1-207ENST00000494090 CXCL9Q07325 125 aa19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms