RNA–Protein interactions for RNA: ENST00000494083.1

CDC42EP3-205, Transcript of CDC42 effector protein 3, humanhuman

TSL 2

Gene CDC42EP3, Length 3,726 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-205ENST00000494083 PCM1Q15154 2024 aa2.76□□□□□ -1.97
CDC42EP3-205ENST00000494083 CCDC78A2IDD5 438 aa2.76□□□□□ -1.97
CDC42EP3-205ENST00000494083 MMP1P03956 469 aa2.76□□□□□ -1.97
CDC42EP3-205ENST00000494083 ENPP1P22413 925 aa2.76□□□□□ -1.97
CDC42EP3-205ENST00000494083 SFPQP23246 707 aaKnown RBP eCLIP2.76□□□□□ -1.97
CDC42EP3-205ENST00000494083 PAX3P23760 479 aa2.76□□□□□ -1.97
CDC42EP3-205ENST00000494083 ELF1P32519 619 aa2.76□□□□□ -1.97
CDC42EP3-205ENST00000494083 NUMBP49757 651 aa2.76□□□□□ -1.97
CDC42EP3-205ENST00000494083 MNAT1P51948 309 aa2.76□□□□□ -1.97
CDC42EP3-205ENST00000494083 LIMK1P53667 647 aa2.76□□□□□ -1.97
CDC42EP3-205ENST00000494083 TGFB2P61812 414 aa2.76□□□□□ -1.97
CDC42EP3-205ENST00000494083 ELF3P78545 371 aaPredicted RBP2.76□□□□□ -1.97
CDC42EP3-205ENST00000494083 SRSF2Q01130 221 aaKnown RBP2.76□□□□□ -1.97
CDC42EP3-205ENST00000494083 OCRLQ01968 901 aa2.76□□□□□ -1.97
CDC42EP3-205ENST00000494083 MCL1Q07820 350 aa2.76□□□□□ -1.97
CDC42EP3-205ENST00000494083 BNIP1Q12981 228 aa2.76□□□□□ -1.97
CDC42EP3-205ENST00000494083 MRPL49Q13405 166 aaKnown RBP2.76□□□□□ -1.97
CDC42EP3-205ENST00000494083 CPEB4Q17RY0 729 aaKnown RBP eCLIP2.76□□□□□ -1.97
CDC42EP3-205ENST00000494083 ZDHHC24Q6UX98 284 aa2.76□□□□□ -1.97
CDC42EP3-205ENST00000494083 RASSF3Q86WH2 238 aa2.76□□□□□ -1.97
CDC42EP3-205ENST00000494083 CCDC13Q8IYE1 715 aa2.76□□□□□ -1.97
CDC42EP3-205ENST00000494083 TRIM58Q8NG06 486 aa2.76□□□□□ -1.97
CDC42EP3-205ENST00000494083 ZNF384Q8TF68 577 aa2.76□□□□□ -1.97
CDC42EP3-205ENST00000494083 SNRNP27Q8WVK2 155 aaKnown RBP2.76□□□□□ -1.97
CDC42EP3-205ENST00000494083 PPP1R14BQ96C90 147 aa2.76□□□□□ -1.97
CDC42EP3-205ENST00000494083 DACH2Q96NX9 599 aa2.76□□□□□ -1.97
CDC42EP3-205ENST00000494083 MYOCQ99972 504 aa2.76□□□□□ -1.97
CDC42EP3-205ENST00000494083 UPF3BQ9BZI7 483 aaKnown RBP2.76□□□□□ -1.97
CDC42EP3-205ENST00000494083 IFT22Q9H7X7 185 aa2.76□□□□□ -1.97
CDC42EP3-205ENST00000494083 ACTR5Q9H9F9 607 aaPredicted RBP2.76□□□□□ -1.97
CDC42EP3-205ENST00000494083 DDX25Q9UHL0 483 aaKnown RBP2.76□□□□□ -1.97
CDC42EP3-205ENST00000494083 SNX12Q9UMY4 172 aa2.76□□□□□ -1.97
CDC42EP3-205ENST00000494083 DAAM1Q9Y4D1 1078 aa2.76□□□□□ -1.97
CDC42EP3-205ENST00000494083 CYP46A1Q9Y6A2 500 aa2.76□□□□□ -1.97
CDC42EP3-205ENST00000494083 SPTBN5Q9NRC6 3674 aaKnown RBP2.76□□□□□ -1.97
CDC42EP3-205ENST00000494083 RHOBTB3O94955 611 aa2.75□□□□□ -1.97
CDC42EP3-205ENST00000494083 RTN3O95197 1032 aaPredicted RBP2.75□□□□□ -1.97
CDC42EP3-205ENST00000494083 HSPD1P10809 573 aaKnown RBP2.75□□□□□ -1.97
CDC42EP3-205ENST00000494083 CPA1P15085 419 aa2.75□□□□□ -1.97
CDC42EP3-205ENST00000494083 PROZP22891 400 aa2.75□□□□□ -1.97
CDC42EP3-205ENST00000494083 PRKCIP41743 596 aa2.75□□□□□ -1.97
CDC42EP3-205ENST00000494083 GNAQP50148 359 aa2.75□□□□□ -1.97
CDC42EP3-205ENST00000494083 RNASE9P60153 205 aaKnown RBP2.75□□□□□ -1.97
CDC42EP3-205ENST00000494083 NHLH2Q02577 135 aa2.75□□□□□ -1.97
CDC42EP3-205ENST00000494083 KLRC3Q07444 240 aa2.75□□□□□ -1.97
CDC42EP3-205ENST00000494083 GCKRQ14397 625 aa2.75□□□□□ -1.97
CDC42EP3-205ENST00000494083 STAT4Q14765 748 aa2.75□□□□□ -1.97
CDC42EP3-205ENST00000494083 MTF1Q14872 753 aa2.75□□□□□ -1.97
CDC42EP3-205ENST00000494083 VPS72Q15906 364 aa2.75□□□□□ -1.97
CDC42EP3-205ENST00000494083 CDC37Q16543 378 aaPredicted RBP2.75□□□□□ -1.97
CDC42EP3-205ENST00000494083 SLC9C2Q5TAH2 1124 aa2.75□□□□□ -1.97
CDC42EP3-205ENST00000494083 KLHDC7AQ5VTJ3 777 aa2.75□□□□□ -1.97
CDC42EP3-205ENST00000494083 SPATA1Q5VX52 437 aa2.75□□□□□ -1.97
CDC42EP3-205ENST00000494083 NAIF1Q69YI7 327 aaPredicted RBP2.75□□□□□ -1.97
CDC42EP3-205ENST00000494083 KRT26Q7Z3Y9 468 aa2.75□□□□□ -1.97
CDC42EP3-205ENST00000494083 ADGRG6Q86SQ4 1221 aa2.75□□□□□ -1.97
CDC42EP3-205ENST00000494083 WDR75Q8IWA0 830 aaKnown RBP2.75□□□□□ -1.97
CDC42EP3-205ENST00000494083 CCDC170Q8IYT3 715 aa2.75□□□□□ -1.97
CDC42EP3-205ENST00000494083 ADSSL1Q8N142 457 aa2.75□□□□□ -1.97
CDC42EP3-205ENST00000494083 CNNM3Q8NE01 707 aa2.75□□□□□ -1.97
CDC42EP3-205ENST00000494083 OR6Y1Q8NGX8 325 aa2.75□□□□□ -1.97
CDC42EP3-205ENST00000494083 MYCBPAPQ8TBZ2 947 aa2.75□□□□□ -1.97
CDC42EP3-205ENST00000494083 ADAMTS16Q8TE57 1224 aa2.75□□□□□ -1.97
CDC42EP3-205ENST00000494083 DENND1AQ8TEH3 1009 aa2.75□□□□□ -1.97
CDC42EP3-205ENST00000494083 PGM2Q96G03 612 aa2.75□□□□□ -1.97
CDC42EP3-205ENST00000494083 RPS6KC1Q96S38 1066 aa2.75□□□□□ -1.97
CDC42EP3-205ENST00000494083 MMS19Q96T76 1030 aa2.75□□□□□ -1.97
CDC42EP3-205ENST00000494083 GDF15Q99988 308 aa2.75□□□□□ -1.97
CDC42EP3-205ENST00000494083 SLC2A11Q9BYW1 496 aa2.75□□□□□ -1.97
CDC42EP3-205ENST00000494083 ASPSCR1Q9BZE9 553 aa2.75□□□□□ -1.97
CDC42EP3-205ENST00000494083 FAM107BQ9H098 131 aa2.75□□□□□ -1.97
CDC42EP3-205ENST00000494083 TNMDQ9H2S6 317 aa2.75□□□□□ -1.97
CDC42EP3-205ENST00000494083 THAP9Q9H5L6 903 aa2.75□□□□□ -1.97
CDC42EP3-205ENST00000494083 PDE11AQ9HCR9 933 aa2.75□□□□□ -1.97
CDC42EP3-205ENST00000494083 PNMA2Q9UL42 364 aa2.75□□□□□ -1.97
CDC42EP3-205ENST00000494083 PLA2G4CQ9UP65 541 aa2.75□□□□□ -1.97
CDC42EP3-205ENST00000494083 MAPRE3Q9UPY8 281 aa2.75□□□□□ -1.97
CDC42EP3-205ENST00000494083 SSX2IPQ9Y2D8 614 aa2.75□□□□□ -1.97
CDC42EP3-205ENST00000494083 SHROOM3Q8TF72 1996 aa2.75□□□□□ -1.97
CDC42EP3-205ENST00000494083 PLXNA2O75051 1894 aa2.75□□□□□ -1.97
CDC42EP3-205ENST00000494083 SHTN1A0MZ66 631 aa2.75□□□□□ -1.97
CDC42EP3-205ENST00000494083 EME2A4GXA9 379 aaPredicted RBP2.75□□□□□ -1.97
CDC42EP3-205ENST00000494083 NRP1O14786 923 aa2.75□□□□□ -1.97
CDC42EP3-205ENST00000494083 ADAMTS3O15072 1205 aa2.75□□□□□ -1.97
CDC42EP3-205ENST00000494083 RNMTO43148 476 aaKnown RBP2.75□□□□□ -1.97
CDC42EP3-205ENST00000494083 KATNA1O75449 491 aa2.75□□□□□ -1.97
CDC42EP3-205ENST00000494083 PRSS23O95084 383 aa2.75□□□□□ -1.97
CDC42EP3-205ENST00000494083 CASP14P31944 242 aa2.75□□□□□ -1.97
CDC42EP3-205ENST00000494083 PRPHP41219 470 aa2.75□□□□□ -1.97
CDC42EP3-205ENST00000494083 PPATQ06203 517 aa2.75□□□□□ -1.97
CDC42EP3-205ENST00000494083 TBL3Q12788 808 aaKnown RBP2.75□□□□□ -1.97
CDC42EP3-205ENST00000494083 FOXD4Q12950 439 aaPredicted RBP2.75□□□□□ -1.97
CDC42EP3-205ENST00000494083 MYBPC2Q14324 1141 aa2.75□□□□□ -1.97
CDC42EP3-205ENST00000494083 TTF1Q15361 905 aaPredicted RBP2.75□□□□□ -1.97
CDC42EP3-205ENST00000494083 DLGAP5Q15398 846 aa2.75□□□□□ -1.97
CDC42EP3-205ENST00000494083 MAN2A1Q16706 1144 aa2.75□□□□□ -1.97
CDC42EP3-205ENST00000494083 PROSER3Q2NL68 480 aa2.75□□□□□ -1.97
CDC42EP3-205ENST00000494083 PDCD4Q53EL6 469 aaKnown RBP2.75□□□□□ -1.97
CDC42EP3-205ENST00000494083 DCAF17Q5H9S7 520 aaPredicted RBP2.75□□□□□ -1.97
CDC42EP3-205ENST00000494083 TAS1R1Q7RTX1 841 aa2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms