RNA–Protein interactions for RNA: ENST00000494069.1

LRCH3-219, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 5

Gene LRCH3, Length 783 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-219ENST00000494069 RAD54BQ9Y620 910 aa8.94□□□□□ -0.98
LRCH3-219ENST00000494069 LAMA1P25391 3075 aa8.94□□□□□ -0.98
LRCH3-219ENST00000494069 CACNA1AO00555 2505 aa8.94□□□□□ -0.98
LRCH3-219ENST00000494069 RALGAPA1Q6GYQ0 2036 aa8.93□□□□□ -0.98
LRCH3-219ENST00000494069 SPAG17Q6Q759 2223 aa8.93□□□□□ -0.98
LRCH3-219ENST00000494069 SPTBN2O15020 2390 aa8.93□□□□□ -0.98
LRCH3-219ENST00000494069 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa8.93□□□□□ -0.98
LRCH3-219ENST00000494069 BCLAF3A2AJT9 711 aaKnown RBP8.93□□□□□ -0.98
LRCH3-219ENST00000494069 M0QYV0 167 aa8.93□□□□□ -0.98
LRCH3-219ENST00000494069 P4HA2O15460 535 aa8.93□□□□□ -0.98
LRCH3-219ENST00000494069 MSI1O43347 362 aaKnown RBP8.93□□□□□ -0.98
LRCH3-219ENST00000494069 TSPAN3O60637 253 aa8.93□□□□□ -0.98
LRCH3-219ENST00000494069 RHOBTB1O94844 696 aa8.93□□□□□ -0.98
LRCH3-219ENST00000494069 GNA14O95837 355 aa8.93□□□□□ -0.98
LRCH3-219ENST00000494069 AFPP02771 609 aaKnown RBP8.93□□□□□ -0.98
LRCH3-219ENST00000494069 ZNF806P0C7X5 589 aa8.93□□□□□ -0.98
LRCH3-219ENST00000494069 HOXB2P14652 356 aa8.93□□□□□ -0.98
LRCH3-219ENST00000494069 GABRG2P18507 467 aa8.93□□□□□ -0.98
LRCH3-219ENST00000494069 SLC9A1P19634 815 aa8.93□□□□□ -0.98
LRCH3-219ENST00000494069 P2RY2P41231 377 aa8.93□□□□□ -0.98
LRCH3-219ENST00000494069 DGKGP49619 791 aa8.93□□□□□ -0.98
LRCH3-219ENST00000494069 ZNF132P52740 706 aa8.93□□□□□ -0.98
LRCH3-219ENST00000494069 MARSP56192 900 aaKnown RBP8.93□□□□□ -0.98
LRCH3-219ENST00000494069 DAOAP59103 153 aa8.93□□□□□ -0.98
LRCH3-219ENST00000494069 TRIP4Q15650 581 aaPredicted RBP8.93□□□□□ -0.98
LRCH3-219ENST00000494069 ELF2Q15723 593 aa8.93□□□□□ -0.98
LRCH3-219ENST00000494069 CNGA2Q16280 664 aa8.93□□□□□ -0.98
LRCH3-219ENST00000494069 MAP7D1Q3KQU3 841 aa8.93□□□□□ -0.98
LRCH3-219ENST00000494069 AASDHQ4L235 1098 aaPredicted RBP8.93□□□□□ -0.98
LRCH3-219ENST00000494069 USP39Q53GS9 565 aaKnown RBP8.93□□□□□ -0.98
LRCH3-219ENST00000494069 PMS2CLQ68D20 193 aa8.93□□□□□ -0.98
LRCH3-219ENST00000494069 DENND1BQ6P3S1 775 aa8.93□□□□□ -0.98
LRCH3-219ENST00000494069 ARMCX6Q7L4S7 300 aa8.93□□□□□ -0.98
LRCH3-219ENST00000494069 TADA2BQ86TJ2 420 aa8.93□□□□□ -0.98
LRCH3-219ENST00000494069 FMNL3Q8IVF7 1028 aa8.93□□□□□ -0.98
LRCH3-219ENST00000494069 TMEFF1Q8IYR6 380 aa8.93□□□□□ -0.98
LRCH3-219ENST00000494069 SIX6OS1Q8N1H7 587 aa8.93□□□□□ -0.98
LRCH3-219ENST00000494069 PGBD3Q8N328 593 aa8.93□□□□□ -0.98
LRCH3-219ENST00000494069 ARHGAP18Q8N392 663 aa8.93□□□□□ -0.98
LRCH3-219ENST00000494069 DEFB119Q8N690 84 aa8.93□□□□□ -0.98
LRCH3-219ENST00000494069 SORCS1Q8WY21 1168 aa8.93□□□□□ -0.98
LRCH3-219ENST00000494069 KCTD13Q8WZ19 329 aa8.93□□□□□ -0.98
LRCH3-219ENST00000494069 IPO9Q96P70 1041 aaKnown RBP8.93□□□□□ -0.98
LRCH3-219ENST00000494069 XPO6Q96QU8 1125 aaKnown RBP8.93□□□□□ -0.98
LRCH3-219ENST00000494069 MIS12Q9H081 205 aa8.93□□□□□ -0.98
LRCH3-219ENST00000494069 POLMQ9NP87 494 aaPredicted RBP8.93□□□□□ -0.98
LRCH3-219ENST00000494069 UBE2TQ9NPD8 197 aaPredicted RBP8.93□□□□□ -0.98
LRCH3-219ENST00000494069 CD93Q9NPY3 652 aa8.93□□□□□ -0.98
LRCH3-219ENST00000494069 CACNA2D2Q9NY47 1150 aa8.93□□□□□ -0.98
LRCH3-219ENST00000494069 BCCIPQ9P287 314 aaKnown RBP eCLIP8.93□□□□□ -0.98
LRCH3-219ENST00000494069 RWDD2AQ9UIY3 292 aa8.93□□□□□ -0.98
LRCH3-219ENST00000494069 FBXO10Q9UK96 956 aa8.93□□□□□ -0.98
LRCH3-219ENST00000494069 KIAA1257Q9ULG3 409 aa8.93□□□□□ -0.98
LRCH3-219ENST00000494069 STRIP2Q9ULQ0 834 aa8.93□□□□□ -0.98
LRCH3-219ENST00000494069 GOLGA6L7A0A1B0GV03 622 aa8.92□□□□□ -0.98
LRCH3-219ENST00000494069 PATE3B3GLJ2 98 aa8.92□□□□□ -0.98
LRCH3-219ENST00000494069 SLC30A4O14863 429 aa8.92□□□□□ -0.98
LRCH3-219ENST00000494069 ALDH1A2O94788 518 aa8.92□□□□□ -0.98
LRCH3-219ENST00000494069 CAVIN2O95810 425 aa8.92□□□□□ -0.98
LRCH3-219ENST00000494069 FYNP06241 537 aa8.92□□□□□ -0.98
LRCH3-219ENST00000494069 SETSIPP0DME0 302 aa8.92□□□□□ -0.98
LRCH3-219ENST00000494069 KRT5P13647 590 aa8.92□□□□□ -0.98
LRCH3-219ENST00000494069 NTSR1P30989 418 aa8.92□□□□□ -0.98
LRCH3-219ENST00000494069 PTGER3P43115 390 aa8.92□□□□□ -0.98
LRCH3-219ENST00000494069 DHPSP49366 369 aaPredicted RBP8.92□□□□□ -0.98
LRCH3-219ENST00000494069 SGSHP51688 502 aa8.92□□□□□ -0.98
LRCH3-219ENST00000494069 MFAP3P55082 362 aa8.92□□□□□ -0.98
LRCH3-219ENST00000494069 FOXK2Q01167 660 aa8.92□□□□□ -0.98
LRCH3-219ENST00000494069 GCNT1Q02742 428 aa8.92□□□□□ -0.98
LRCH3-219ENST00000494069 CETN1Q12798 172 aa8.92□□□□□ -0.98
LRCH3-219ENST00000494069 MMRN1Q13201 1228 aa8.92□□□□□ -0.98
LRCH3-219ENST00000494069 HSF5Q4G112 596 aaPredicted RBP8.92□□□□□ -0.98
LRCH3-219ENST00000494069 TMEM215Q68D42 235 aa8.92□□□□□ -0.98
LRCH3-219ENST00000494069 FAM217AQ8IXS0 508 aa8.92□□□□□ -0.98
LRCH3-219ENST00000494069 CHPFQ8IZ52 775 aa8.92□□□□□ -0.98
LRCH3-219ENST00000494069 TRIML1Q8N9V2 468 aa8.92□□□□□ -0.98
LRCH3-219ENST00000494069 C12orf50Q8NA57 414 aaPredicted RBP8.92□□□□□ -0.98
LRCH3-219ENST00000494069 NETO1Q8TDF5 533 aa8.92□□□□□ -0.98
LRCH3-219ENST00000494069 KCNV2Q8TDN2 545 aa8.92□□□□□ -0.98
LRCH3-219ENST00000494069 IPO4Q8TEX9 1081 aaKnown RBP8.92□□□□□ -0.98
LRCH3-219ENST00000494069 RNF139Q8WU17 664 aa8.92□□□□□ -0.98
LRCH3-219ENST00000494069 MYEOVQ96EZ4 313 aa8.92□□□□□ -0.98
LRCH3-219ENST00000494069 CDK5RAP1Q96SZ6 601 aaKnown RBP8.92□□□□□ -0.98
LRCH3-219ENST00000494069 RTKNQ9BST9 563 aa8.92□□□□□ -0.98
LRCH3-219ENST00000494069 DCLK3Q9C098 648 aa8.92□□□□□ -0.98
LRCH3-219ENST00000494069 CNGB3Q9NQW8 809 aa8.92□□□□□ -0.98
LRCH3-219ENST00000494069 VPS45Q9NRW7 570 aa8.92□□□□□ -0.98
LRCH3-219ENST00000494069 TJP2Q9UDY2 1190 aa8.92□□□□□ -0.98
LRCH3-219ENST00000494069 CYTH4Q9UIA0 394 aa8.92□□□□□ -0.98
LRCH3-219ENST00000494069 AJAP1Q9UKB5 411 aaPredicted RBP8.92□□□□□ -0.98
LRCH3-219ENST00000494069 CNTN6Q9UQ52 1028 aa8.92□□□□□ -0.98
LRCH3-219ENST00000494069 PCDHGA5Q9Y5G8 931 aa8.92□□□□□ -0.98
LRCH3-219ENST00000494069 NCOR2Q9Y618 2525 aa8.92□□□□□ -0.98
LRCH3-219ENST00000494069 BECN2A8MW95 431 aa8.91□□□□□ -0.98
LRCH3-219ENST00000494069 GFRA2O00451 464 aa8.91□□□□□ -0.98
LRCH3-219ENST00000494069 LETM1O95202 739 aaPredicted RBP8.91□□□□□ -0.98
LRCH3-219ENST00000494069 NDUFV2P19404 249 aa8.91□□□□□ -0.98
LRCH3-219ENST00000494069 SDHBP21912 280 aa8.91□□□□□ -0.98
LRCH3-219ENST00000494069 CHKAP35790 457 aa8.91□□□□□ -0.98
LRCH3-219ENST00000494069 IL12RB1P42701 662 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms