RNA–Protein interactions for RNA: ENST00000493695.1

SMC4-223, Transcript of structural maintenance of chromosomes 4, human

TSL 2

Gene SMC4, Length 457 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMC4-223	ENST00000493695	OGDHL	Q9ULD0	1010 aa		4.94	□□□□□ -1.62
SMC4-223	ENST00000493695	HPSE	Q9Y251	543 aa		4.94	□□□□□ -1.62
SMC4-223	ENST00000493695	SPATA31A1	Q5TZJ5	1347 aa		4.94	□□□□□ -1.62
SMC4-223	ENST00000493695	ERVV-2	B6SEH9	535 aa		4.93	□□□□□ -1.62
SMC4-223	ENST00000493695	ACOT8	O14734	319 aa		4.93	□□□□□ -1.62
SMC4-223	ENST00000493695	TNFRSF13B	O14836	293 aa	Predicted RBP	4.93	□□□□□ -1.62
SMC4-223	ENST00000493695	PRPF4	O43172	522 aa	Known RBP eCLIP	4.93	□□□□□ -1.62
SMC4-223	ENST00000493695	MAP4K4	O95819	1239 aa	Predicted RBP	4.93	□□□□□ -1.62
SMC4-223	ENST00000493695	POLD2	P49005	469 aa		4.93	□□□□□ -1.62
SMC4-223	ENST00000493695	PIN1	Q13526	163 aa	Predicted RBP	4.93	□□□□□ -1.62
SMC4-223	ENST00000493695	TTF1	Q15361	905 aa	Predicted RBP	4.93	□□□□□ -1.62
SMC4-223	ENST00000493695	GRHL2	Q6ISB3	625 aa		4.93	□□□□□ -1.62
SMC4-223	ENST00000493695	MZT2A	Q6P582	158 aa		4.93	□□□□□ -1.62
SMC4-223	ENST00000493695	SPATA2L	Q8IUW3	424 aa	Predicted RBP	4.93	□□□□□ -1.62
SMC4-223	ENST00000493695	IQCF1	Q8N6M8	205 aa		4.93	□□□□□ -1.62
SMC4-223	ENST00000493695	IPCEF1	Q8WWN9	437 aa	Predicted RBP	4.93	□□□□□ -1.62
SMC4-223	ENST00000493695	LPAR1	Q92633	364 aa		4.93	□□□□□ -1.62
SMC4-223	ENST00000493695	MIB2	Q96AX9	1013 aa		4.93	□□□□□ -1.62
SMC4-223	ENST00000493695	THSD1	Q9NS62	852 aa		4.93	□□□□□ -1.62
SMC4-223	ENST00000493695	TBC1D23	Q9NUY8	699 aa		4.93	□□□□□ -1.62
SMC4-223	ENST00000493695	TRBV5-3	A0A0A0MS03	114 aa		4.92	□□□□□ -1.62
SMC4-223	ENST00000493695	C16orf96	A6NNT2	1141 aa		4.92	□□□□□ -1.62
SMC4-223	ENST00000493695	FAM227A	F5H4B4	570 aa		4.92	□□□□□ -1.62
SMC4-223	ENST00000493695	TLX3	O43711	291 aa	Predicted RBP	4.92	□□□□□ -1.62
SMC4-223	ENST00000493695	TUSC2	O75896	110 aa		4.92	□□□□□ -1.62
SMC4-223	ENST00000493695	CAMTA2	O94983	1202 aa		4.92	□□□□□ -1.62
SMC4-223	ENST00000493695	GAS8-AS1	O95177	125 aa		4.92	□□□□□ -1.62
SMC4-223	ENST00000493695	PAPSS2	O95340	614 aa	Predicted RBP	4.92	□□□□□ -1.62
SMC4-223	ENST00000493695	HOXB2	P14652	356 aa		4.92	□□□□□ -1.62
SMC4-223	ENST00000493695	ARRB2	P32121	409 aa		4.92	□□□□□ -1.62
SMC4-223	ENST00000493695	EPHB1	P54762	984 aa		4.92	□□□□□ -1.62
SMC4-223	ENST00000493695	BFSP2	Q13515	415 aa		4.92	□□□□□ -1.62
SMC4-223	ENST00000493695	FHL3	Q13643	280 aa		4.92	□□□□□ -1.62
SMC4-223	ENST00000493695	DLGAP5	Q15398	846 aa		4.92	□□□□□ -1.62
SMC4-223	ENST00000493695	CNN3	Q15417	329 aa	Known RBP	4.92	□□□□□ -1.62
SMC4-223	ENST00000493695	CNGA2	Q16280	664 aa		4.92	□□□□□ -1.62
SMC4-223	ENST00000493695	ODF3L2	Q3SX64	289 aa		4.92	□□□□□ -1.62
SMC4-223	ENST00000493695	PLAG1	Q6DJT9	500 aa		4.92	□□□□□ -1.62
SMC4-223	ENST00000493695	PPP4R4	Q6NUP7	873 aa		4.92	□□□□□ -1.62
SMC4-223	ENST00000493695	SWSAP1	Q6NVH7	229 aa		4.92	□□□□□ -1.62
SMC4-223	ENST00000493695	OVCH2	Q7RTZ1	564 aa		4.92	□□□□□ -1.62
SMC4-223	ENST00000493695	NMD3	Q96D46	503 aa	Known RBP	4.92	□□□□□ -1.62
SMC4-223	ENST00000493695	TTLL2	Q9BWV7	592 aa		4.92	□□□□□ -1.62
SMC4-223	ENST00000493695	C22orf23	Q9BZE7	217 aa		4.92	□□□□□ -1.62
SMC4-223	ENST00000493695	CHST8	Q9H2A9	424 aa		4.92	□□□□□ -1.62
SMC4-223	ENST00000493695	METTL14	Q9HCE5	456 aa	Known RBP	4.92	□□□□□ -1.62
SMC4-223	ENST00000493695	DPPA5	A6NC42	116 aa		4.91	□□□□□ -1.62
SMC4-223	ENST00000493695	WDR47	O94967	919 aa		4.91	□□□□□ -1.62
SMC4-223	ENST00000493695	IGKV3-20	P01619	116 aa		4.91	□□□□□ -1.62
SMC4-223	ENST00000493695	HMGB1	P09429	215 aa	Known RBP	4.91	□□□□□ -1.62
SMC4-223	ENST00000493695	TXN	P10599	105 aa	Known RBP	4.91	□□□□□ -1.62
SMC4-223	ENST00000493695	FGF3	P11487	239 aa	Predicted RBP	4.91	□□□□□ -1.62
SMC4-223	ENST00000493695	CIITA	P33076	1130 aa		4.91	□□□□□ -1.62
SMC4-223	ENST00000493695	IDUA	P35475	653 aa		4.91	□□□□□ -1.62
SMC4-223	ENST00000493695	RRP1	P56182	461 aa	Known RBP	4.91	□□□□□ -1.62
SMC4-223	ENST00000493695	DNASE1L3	Q13609	305 aa		4.91	□□□□□ -1.62
SMC4-223	ENST00000493695	CLCA4	Q14CN2	919 aa		4.91	□□□□□ -1.62
SMC4-223	ENST00000493695	SMTNL2	Q2TAL5	461 aa		4.91	□□□□□ -1.62
SMC4-223	ENST00000493695	ODR4	Q5SWX8	454 aa		4.91	□□□□□ -1.62
SMC4-223	ENST00000493695	APOA5	Q6Q788	366 aa		4.91	□□□□□ -1.62
SMC4-223	ENST00000493695	SLC39A5	Q6ZMH5	540 aa		4.91	□□□□□ -1.62
SMC4-223	ENST00000493695	UNC13D	Q70J99	1090 aa		4.91	□□□□□ -1.62
SMC4-223	ENST00000493695	DNASE2B	Q8WZ79	361 aa		4.91	□□□□□ -1.62
SMC4-223	ENST00000493695	AKAP1	Q92667	903 aa	Known RBP eCLIP	4.91	□□□□□ -1.62
SMC4-223	ENST00000493695	CELF1	Q92879	486 aa	Known RBP	4.91	□□□□□ -1.62
SMC4-223	ENST00000493695	FAM84B	Q96KN1	310 aa	Predicted RBP	4.91	□□□□□ -1.62
SMC4-223	ENST00000493695	ZNF287	Q9HBT7	754 aa		4.91	□□□□□ -1.62
SMC4-223	ENST00000493695	DKK4	Q9UBT3	224 aa		4.91	□□□□□ -1.62
SMC4-223	ENST00000493695	AGO2	Q9UKV8	859 aa	Known RBP	4.91	□□□□□ -1.62
SMC4-223	ENST00000493695	INSL5	Q9Y5Q6	135 aa		4.91	□□□□□ -1.62
SMC4-223	ENST00000493695	ISM1	B1AKI9	464 aa		4.9	□□□□□ -1.63
SMC4-223	ENST00000493695	PRPF3	O43395	683 aa	Known RBP	4.9	□□□□□ -1.63
SMC4-223	ENST00000493695	S100B	P04271	92 aa	Predicted RBP	4.9	□□□□□ -1.63
SMC4-223	ENST00000493695	ACAA1	P09110	424 aa	Predicted RBP	4.9	□□□□□ -1.63
SMC4-223	ENST00000493695	CHRNB1	P11230	501 aa		4.9	□□□□□ -1.63
SMC4-223	ENST00000493695	BTF3	P20290	206 aa	Known RBP	4.9	□□□□□ -1.63
SMC4-223	ENST00000493695	CARS	P49589	748 aa	Known RBP	4.9	□□□□□ -1.63
SMC4-223	ENST00000493695	COPA	P53621	1224 aa		4.9	□□□□□ -1.63
SMC4-223	ENST00000493695	NFE2	Q16621	373 aa	Predicted RBP	4.9	□□□□□ -1.63
SMC4-223	ENST00000493695	MANEAL	Q5VSG8	457 aa		4.9	□□□□□ -1.63
SMC4-223	ENST00000493695	DHRS13	Q6UX07	377 aa		4.9	□□□□□ -1.63
SMC4-223	ENST00000493695	SKAP1	Q86WV1	359 aa		4.9	□□□□□ -1.63
SMC4-223	ENST00000493695	RAVER1	Q8IY67	606 aa	Known RBP	4.9	□□□□□ -1.63
SMC4-223	ENST00000493695	SENP7	Q9BQF6	1050 aa		4.9	□□□□□ -1.63
SMC4-223	ENST00000493695	TRIM2	Q9C040	744 aa		4.9	□□□□□ -1.63
SMC4-223	ENST00000493695	ABHD10	Q9NUJ1	306 aa		4.9	□□□□□ -1.63
SMC4-223	ENST00000493695	KLHL42	Q9P2K6	505 aa		4.9	□□□□□ -1.63
SMC4-223	ENST00000493695	ZNF212	Q9UDV6	495 aa		4.9	□□□□□ -1.63
SMC4-223	ENST00000493695	UTS2R	Q9UKP6	389 aa		4.9	□□□□□ -1.63
SMC4-223	ENST00000493695	PCDHA7	Q9UN72	937 aa		4.9	□□□□□ -1.63
SMC4-223	ENST00000493695	RPS10-NUDT3	A0A1W2PQS6	291 aa		4.89	□□□□□ -1.63
SMC4-223	ENST00000493695	E2F8	A0AVK6	867 aa		4.89	□□□□□ -1.63
SMC4-223	ENST00000493695	MBP	P02686	304 aa	Predicted RBP	4.89	□□□□□ -1.63
SMC4-223	ENST00000493695	DRD1	P21728	446 aa		4.89	□□□□□ -1.63
SMC4-223	ENST00000493695	LTB	Q06643	244 aa		4.89	□□□□□ -1.63
SMC4-223	ENST00000493695	C6orf10	Q5SRN2	563 aa		4.89	□□□□□ -1.63
SMC4-223	ENST00000493695	GFI1B	Q5VTD9	330 aa		4.89	□□□□□ -1.63
SMC4-223	ENST00000493695	DDX51	Q8N8A6	666 aa	Known RBP eCLIP	4.89	□□□□□ -1.63
SMC4-223	ENST00000493695	CENPI	Q92674	756 aa	Predicted RBP	4.89	□□□□□ -1.63
SMC4-223	ENST00000493695	EME1	Q96AY2	570 aa		4.89	□□□□□ -1.63

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