RNA–Protein interactions for RNA: ENST00000493683.5

RNF40-203, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 5,371 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-203ENST00000493683 DPP10Q8N608 796 aa20.63■□□□□ 0.89
RNF40-203ENST00000493683 TRIM63Q969Q1 353 aa20.63■□□□□ 0.89
RNF40-203ENST00000493683 LRRC39Q96DD0 335 aa20.63■□□□□ 0.89
RNF40-203ENST00000493683 TRIM8Q9BZR9 551 aa20.63■□□□□ 0.89
RNF40-203ENST00000493683 GDF3Q9NR23 364 aa20.63■□□□□ 0.89
RNF40-203ENST00000493683 ZNF862O60290 1169 aa20.63■□□□□ 0.89
RNF40-203ENST00000493683 NBNO60934 754 aa20.63■□□□□ 0.89
RNF40-203ENST00000493683 SPATA31A6Q5VVP1 1343 aa20.63■□□□□ 0.89
RNF40-203ENST00000493683 CAP2P40123 477 aa20.63■□□□□ 0.89
RNF40-203ENST00000493683 CCNG1P51959 295 aa20.63■□□□□ 0.89
RNF40-203ENST00000493683 IRGCQ6NXR0 463 aa20.63■□□□□ 0.89
RNF40-203ENST00000493683 ZCCHC8Q6NZY4 707 aaKnown RBP20.63■□□□□ 0.89
RNF40-203ENST00000493683 GINS4Q9BRT9 223 aa20.63■□□□□ 0.89
RNF40-203ENST00000493683 SEMA4AQ9H3S1 761 aa20.63■□□□□ 0.89
RNF40-203ENST00000493683 MROH8Q9H579 483 aa20.63■□□□□ 0.89
RNF40-203ENST00000493683 FANCEQ9HB96 536 aa20.63■□□□□ 0.89
RNF40-203ENST00000493683 CYP4F12Q9HCS2 524 aa20.63■□□□□ 0.89
RNF40-203ENST00000493683 SREBF2Q12772 1141 aa20.63■□□□□ 0.89
RNF40-203ENST00000493683 MSLNQ13421 630 aaPredicted RBP20.63■□□□□ 0.89
RNF40-203ENST00000493683 PKN1Q16512 942 aa20.63■□□□□ 0.89
RNF40-203ENST00000493683 NFE2Q16621 373 aaPredicted RBP20.63■□□□□ 0.89
RNF40-203ENST00000493683 RNF180Q86T96 592 aa20.63■□□□□ 0.89
RNF40-203ENST00000493683 SLC47A2Q86VL8 602 aa20.63■□□□□ 0.89
RNF40-203ENST00000493683 MRPS31Q92665 395 aaKnown RBP20.63■□□□□ 0.89
RNF40-203ENST00000493683 C9orf16Q9BUW7 83 aa20.63■□□□□ 0.89
RNF40-203ENST00000493683 NDUFAF1Q9Y375 327 aa20.63■□□□□ 0.89
RNF40-203ENST00000493683 CCL15-CCL14A0A0B4J2E2 113 aa20.63■□□□□ 0.89
RNF40-203ENST00000493683 FCHO1O14526 889 aa20.63■□□□□ 0.89
RNF40-203ENST00000493683 LDLRP01130 860 aa20.63■□□□□ 0.89
RNF40-203ENST00000493683 CCL15Q16663 113 aa20.63■□□□□ 0.89
RNF40-203ENST00000493683 N4BP2L1Q5TBK1 243 aaPredicted RBP20.63■□□□□ 0.89
RNF40-203ENST00000493683 KYAT3Q6YP21 454 aaKnown RBP20.63■□□□□ 0.89
RNF40-203ENST00000493683 DPY30Q9C005 99 aa20.63■□□□□ 0.89
RNF40-203ENST00000493683 JCHAINP01591 159 aa20.62■□□□□ 0.89
RNF40-203ENST00000493683 C10orf53Q8N6V4 93 aa20.62■□□□□ 0.89
RNF40-203ENST00000493683 GLT1D1Q96MS3 346 aa20.62■□□□□ 0.89
RNF40-203ENST00000493683 TRPM5Q9NZQ8 1165 aa20.62■□□□□ 0.89
RNF40-203ENST00000493683 DARSP14868 501 aaKnown RBP20.62■□□□□ 0.89
RNF40-203ENST00000493683 GNASQ5JWF2 1037 aa20.62■□□□□ 0.89
RNF40-203ENST00000493683 C11orf96Q7Z7L8 435 aa20.62■□□□□ 0.89
RNF40-203ENST00000493683 AENQ8WTP8 325 aaKnown RBP20.62■□□□□ 0.89
RNF40-203ENST00000493683 GDPD5Q8WTR4 605 aa20.62■□□□□ 0.89
RNF40-203ENST00000493683 MYRFQ9Y2G1 1151 aa20.62■□□□□ 0.89
RNF40-203ENST00000493683 CEMIPQ8WUJ3 1361 aa20.62■□□□□ 0.89
RNF40-203ENST00000493683 A0A0G2JLW4 131 aa20.62■□□□□ 0.89
RNF40-203ENST00000493683 SERPINH1P50454 418 aaKnown RBP20.62■□□□□ 0.89
RNF40-203ENST00000493683 ARMC4Q5T2S8 1044 aa20.62■□□□□ 0.89
RNF40-203ENST00000493683 SNX30Q5VWJ9 437 aa20.62■□□□□ 0.89
RNF40-203ENST00000493683 SCARA3Q6AZY7 606 aa20.62■□□□□ 0.89
RNF40-203ENST00000493683 FAM45AQ8TCE6 357 aa20.62■□□□□ 0.89
RNF40-203ENST00000493683 VAT1Q99536 393 aa20.62■□□□□ 0.89
RNF40-203ENST00000493683 PNMA8BQ9ULN7 279 aaPredicted RBP20.62■□□□□ 0.89
RNF40-203ENST00000493683 NCF1BA6NI72 391 aaPredicted RBP20.62■□□□□ 0.89
RNF40-203ENST00000493683 NCF1CA8MVU1 366 aaPredicted RBP20.62■□□□□ 0.89
RNF40-203ENST00000493683 RHOCP08134 193 aa20.62■□□□□ 0.89
RNF40-203ENST00000493683 NCF1P14598 390 aaPredicted RBP20.62■□□□□ 0.89
RNF40-203ENST00000493683 MSH3P20585 1137 aa20.62■□□□□ 0.89
RNF40-203ENST00000493683 GUCA1AP43080 201 aaPredicted RBP20.62■□□□□ 0.89
RNF40-203ENST00000493683 IL5RAQ01344 420 aa20.62■□□□□ 0.89
RNF40-203ENST00000493683 EPS8Q12929 822 aa20.62■□□□□ 0.89
RNF40-203ENST00000493683 NR6A1Q15406 480 aa20.62■□□□□ 0.89
RNF40-203ENST00000493683 SAMD4BQ5PRF9 694 aaKnown RBP20.62■□□□□ 0.89
RNF40-203ENST00000493683 ZNF438Q7Z4V0 828 aa20.62■□□□□ 0.89
RNF40-203ENST00000493683 NT5DC4Q86YG4 428 aa20.62■□□□□ 0.89
RNF40-203ENST00000493683 CDK20Q8IZL9 346 aa20.62■□□□□ 0.89
RNF40-203ENST00000493683 SPIRE2Q8WWL2 714 aa20.62■□□□□ 0.89
RNF40-203ENST00000493683 RIOX1Q9H6W3 641 aa20.62■□□□□ 0.89
RNF40-203ENST00000493683 GNG14A0A1W2PPG7 69 aa20.61■□□□□ 0.89
RNF40-203ENST00000493683 CD3EAPO15446 510 aaKnown RBP20.61■□□□□ 0.89
RNF40-203ENST00000493683 CYP1A1P04798 512 aaPredicted RBP20.61■□□□□ 0.89
RNF40-203ENST00000493683 SEC23AQ15436 765 aa20.61■□□□□ 0.89
RNF40-203ENST00000493683 CENPTQ96BT3 561 aa20.61■□□□□ 0.89
RNF40-203ENST00000493683 ZCWPW1Q9H0M4 648 aa20.61■□□□□ 0.89
RNF40-203ENST00000493683 DEFB129Q9H1M3 183 aa20.61■□□□□ 0.89
RNF40-203ENST00000493683 ACTR8Q9H981 624 aa20.61■□□□□ 0.89
RNF40-203ENST00000493683 BARX2Q9UMQ3 279 aaPredicted RBP20.61■□□□□ 0.89
RNF40-203ENST00000493683 DYTNA2CJ06 578 aa20.61■□□□□ 0.89
RNF40-203ENST00000493683 H7C0S8 307 aa20.61■□□□□ 0.89
RNF40-203ENST00000493683 B3GAT3O94766 335 aa20.61■□□□□ 0.89
RNF40-203ENST00000493683 ME2P23368 584 aa20.61■□□□□ 0.89
RNF40-203ENST00000493683 RHOAP61586 193 aa20.61■□□□□ 0.89
RNF40-203ENST00000493683 INAQ16352 499 aa20.61■□□□□ 0.89
RNF40-203ENST00000493683 SV2AQ7L0J3 742 aa20.61■□□□□ 0.89
RNF40-203ENST00000493683 IL25Q9H293 177 aa20.61■□□□□ 0.89
RNF40-203ENST00000493683 RAD21L1Q9H4I0 556 aa20.61■□□□□ 0.89
RNF40-203ENST00000493683 FAM20BO75063 409 aa20.61■□□□□ 0.89
RNF40-203ENST00000493683 CPSF4O95639 269 aaKnown RBP20.61■□□□□ 0.89
RNF40-203ENST00000493683 PIK3R1P27986 724 aa20.61■□□□□ 0.89
RNF40-203ENST00000493683 PIK3CGP48736 1102 aa20.61■□□□□ 0.89
RNF40-203ENST00000493683 NMD3Q96D46 503 aaKnown RBP20.61■□□□□ 0.89
RNF40-203ENST00000493683 SLC25A23Q9BV35 468 aa20.61■□□□□ 0.89
RNF40-203ENST00000493683 GPRC5CQ9NQ84 441 aa20.61■□□□□ 0.89
RNF40-203ENST00000493683 RAD51BO15315 384 aa20.61■□□□□ 0.89
RNF40-203ENST00000493683 BMP10O95393 424 aa20.61■□□□□ 0.89
RNF40-203ENST00000493683 TTKP33981 857 aa20.61■□□□□ 0.89
RNF40-203ENST00000493683 ZNF844Q08AG5 666 aa20.61■□□□□ 0.89
RNF40-203ENST00000493683 ELAVL2Q12926 359 aaKnown RBP20.61■□□□□ 0.89
RNF40-203ENST00000493683 KRT73Q86Y46 540 aa20.61■□□□□ 0.89
RNF40-203ENST00000493683 OR8H2Q8N162 312 aa20.61■□□□□ 0.89
RNF40-203ENST00000493683 SLC16A10Q8TF71 515 aa20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms