RNA–Protein interactions for RNA: ENST00000493618.5

ATG4B-223, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 899 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-223ENST00000493618 M0QYV0 167 aa15.32■□□□□ 0.04
ATG4B-223ENST00000493618 MSI1O43347 362 aaKnown RBP15.32■□□□□ 0.04
ATG4B-223ENST00000493618 GABBR2O75899 941 aa15.32■□□□□ 0.04
ATG4B-223ENST00000493618 CHKAP35790 457 aa15.32■□□□□ 0.04
ATG4B-223ENST00000493618 MFAP3P55082 362 aa15.32■□□□□ 0.04
ATG4B-223ENST00000493618 IRX4P78413 519 aa15.32■□□□□ 0.04
ATG4B-223ENST00000493618 RPL6Q02878 288 aaKnown RBP15.32■□□□□ 0.04
ATG4B-223ENST00000493618 BYSLQ13895 437 aaKnown RBP15.32■□□□□ 0.04
ATG4B-223ENST00000493618 N4BP2L1Q5TBK1 243 aaPredicted RBP15.32■□□□□ 0.04
ATG4B-223ENST00000493618 BSPRYQ5W0U4 402 aa15.32■□□□□ 0.04
ATG4B-223ENST00000493618 KIAA1324Q6UXG2 1013 aaKnown RBP15.32■□□□□ 0.04
ATG4B-223ENST00000493618 ELOA2Q8IYF1 753 aaPredicted RBP15.32■□□□□ 0.04
ATG4B-223ENST00000493618 LMO3Q8TAP4 145 aa15.32■□□□□ 0.04
ATG4B-223ENST00000493618 CLEC4CQ8WTT0 213 aa15.32■□□□□ 0.04
ATG4B-223ENST00000493618 DDI1Q8WTU0 396 aa15.32■□□□□ 0.04
ATG4B-223ENST00000493618 RNF139Q8WU17 664 aa15.32■□□□□ 0.04
ATG4B-223ENST00000493618 DDX1Q92499 740 aaKnown RBP15.32■□□□□ 0.04
ATG4B-223ENST00000493618 PLD4Q96BZ4 506 aa15.32■□□□□ 0.04
ATG4B-223ENST00000493618 GABRG3Q99928 467 aa15.32■□□□□ 0.04
ATG4B-223ENST00000493618 CD248Q9HCU0 757 aa15.32■□□□□ 0.04
ATG4B-223ENST00000493618 FSCN3Q9NQT6 498 aa15.32■□□□□ 0.04
ATG4B-223ENST00000493618 FBXO10Q9UK96 956 aa15.32■□□□□ 0.04
ATG4B-223ENST00000493618 STON1Q9Y6Q2 735 aa15.32■□□□□ 0.04
ATG4B-223ENST00000493618 MUC22E2RYF6 1773 aaPredicted RBP15.31■□□□□ 0.04
ATG4B-223ENST00000493618 CACNA1BQ00975 2339 aa15.31■□□□□ 0.04
ATG4B-223ENST00000493618 BICDL2A1A5D9 508 aa15.31■□□□□ 0.04
ATG4B-223ENST00000493618 CYBBP04839 570 aa15.31■□□□□ 0.04
ATG4B-223ENST00000493618 SETSIPP0DME0 302 aa15.31■□□□□ 0.04
ATG4B-223ENST00000493618 ITPKAP23677 461 aa15.31■□□□□ 0.04
ATG4B-223ENST00000493618 PPP1R2P41236 205 aa15.31■□□□□ 0.04
ATG4B-223ENST00000493618 DAOAP59103 153 aa15.31■□□□□ 0.04
ATG4B-223ENST00000493618 PKDCCQ504Y2 493 aa15.31■□□□□ 0.04
ATG4B-223ENST00000493618 TRIM61Q5EBN2 209 aa15.31■□□□□ 0.04
ATG4B-223ENST00000493618 LYSMD4Q5XG99 296 aa15.31■□□□□ 0.04
ATG4B-223ENST00000493618 PMF1Q6P1K2 205 aa15.31■□□□□ 0.04
ATG4B-223ENST00000493618 LCLAT1Q6UWP7 414 aa15.31■□□□□ 0.04
ATG4B-223ENST00000493618 RBBP8NLQ8NC74 664 aaPredicted RBP15.31■□□□□ 0.04
ATG4B-223ENST00000493618 SORCS1Q8WY21 1168 aa15.31■□□□□ 0.04
ATG4B-223ENST00000493618 KCTD13Q8WZ19 329 aa15.31■□□□□ 0.04
ATG4B-223ENST00000493618 LSM14BQ9BX40 385 aaKnown RBP15.31■□□□□ 0.04
ATG4B-223ENST00000493618 SRRTQ9BXP5 876 aaKnown RBP15.31■□□□□ 0.04
ATG4B-223ENST00000493618 OLA1Q9NTK5 396 aaKnown RBP15.31■□□□□ 0.04
ATG4B-223ENST00000493618 KIAA1257Q9ULG3 409 aa15.31■□□□□ 0.04
ATG4B-223ENST00000493618 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.31■□□□□ 0.04
ATG4B-223ENST00000493618 IGHV1OR15-9A0A0B4J2B8 117 aa15.3■□□□□ 0.04
ATG4B-223ENST00000493618 GIPC1O14908 333 aa15.3■□□□□ 0.04
ATG4B-223ENST00000493618 ZBTB24O43167 697 aaPredicted RBP15.3■□□□□ 0.04
ATG4B-223ENST00000493618 KCNK5O95279 499 aa15.3■□□□□ 0.04
ATG4B-223ENST00000493618 PAEPP09466 180 aa15.3■□□□□ 0.04
ATG4B-223ENST00000493618 IL12RB1P42701 662 aa15.3■□□□□ 0.04
ATG4B-223ENST00000493618 MAPK8P45983 427 aa15.3■□□□□ 0.04
ATG4B-223ENST00000493618 CETN1Q12798 172 aa15.3■□□□□ 0.04
ATG4B-223ENST00000493618 KCNH2Q12809 1159 aa15.3■□□□□ 0.04
ATG4B-223ENST00000493618 PAK1Q13153 545 aa15.3■□□□□ 0.04
ATG4B-223ENST00000493618 TRIP4Q15650 581 aaPredicted RBP15.3■□□□□ 0.04
ATG4B-223ENST00000493618 UAP1L1Q3KQV9 507 aa15.3■□□□□ 0.04
ATG4B-223ENST00000493618 PSAPL1Q6NUJ1 521 aa15.3■□□□□ 0.04
ATG4B-223ENST00000493618 CPXM2Q8N436 756 aa15.3■□□□□ 0.04
ATG4B-223ENST00000493618 EHBP1Q8NDI1 1231 aa15.3■□□□□ 0.04
ATG4B-223ENST00000493618 PIWIL1Q96J94 861 aaKnown RBP15.3■□□□□ 0.04
ATG4B-223ENST00000493618 PCDH15Q96QU1 1955 aa15.3■□□□□ 0.04
ATG4B-223ENST00000493618 MIS12Q9H081 205 aa15.3■□□□□ 0.04
ATG4B-223ENST00000493618 INTS2Q9H0H0 1204 aaKnown RBP15.3■□□□□ 0.04
ATG4B-223ENST00000493618 TMEM9BQ9NQ34 198 aa15.3■□□□□ 0.04
ATG4B-223ENST00000493618 SLC27A6Q9Y2P4 619 aa15.3■□□□□ 0.04
ATG4B-223ENST00000493618 NYNRINQ9P2P1 1898 aaKnown RBP15.29■□□□□ 0.04
ATG4B-223ENST00000493618 CDX4O14627 284 aaPredicted RBP15.29■□□□□ 0.04
ATG4B-223ENST00000493618 PMM2O15305 246 aa15.29■□□□□ 0.04
ATG4B-223ENST00000493618 AP5Z1O43299 807 aa15.29■□□□□ 0.04
ATG4B-223ENST00000493618 AFPP02771 609 aaKnown RBP15.29■□□□□ 0.04
ATG4B-223ENST00000493618 CFIP05156 583 aa15.29■□□□□ 0.04
ATG4B-223ENST00000493618 KRT5P13647 590 aa15.29■□□□□ 0.04
ATG4B-223ENST00000493618 HARS2P49590 506 aaKnown RBP15.29■□□□□ 0.04
ATG4B-223ENST00000493618 SGSHP51688 502 aa15.29■□□□□ 0.04
ATG4B-223ENST00000493618 CNGA2Q16280 664 aa15.29■□□□□ 0.04
ATG4B-223ENST00000493618 CAMK4Q16566 473 aa15.29■□□□□ 0.04
ATG4B-223ENST00000493618 FUT11Q495W5 492 aa15.29■□□□□ 0.04
ATG4B-223ENST00000493618 DAB2IPQ5VWQ8 1189 aa15.29■□□□□ 0.04
ATG4B-223ENST00000493618 SLC36A4Q6YBV0 504 aa15.29■□□□□ 0.04
ATG4B-223ENST00000493618 ANKS1BQ7Z6G8 1248 aa15.29■□□□□ 0.04
ATG4B-223ENST00000493618 CACUL1Q86Y37 369 aa15.29■□□□□ 0.04
ATG4B-223ENST00000493618 CREBRFQ8IUR6 639 aa15.29■□□□□ 0.04
ATG4B-223ENST00000493618 SYT12Q8IV01 421 aa15.29■□□□□ 0.04
ATG4B-223ENST00000493618 TRIM59Q8IWR1 403 aa15.29■□□□□ 0.04
ATG4B-223ENST00000493618 FAM217AQ8IXS0 508 aa15.29■□□□□ 0.04
ATG4B-223ENST00000493618 SLC35F5Q8WV83 523 aa15.29■□□□□ 0.04
ATG4B-223ENST00000493618 MRGPRX1Q96LB2 322 aa15.29■□□□□ 0.04
ATG4B-223ENST00000493618 KREMEN1Q96MU8 473 aa15.29■□□□□ 0.04
ATG4B-223ENST00000493618 NUSAP1Q9BXS6 441 aaKnown RBP15.29■□□□□ 0.04
ATG4B-223ENST00000493618 CIPCQ9C0C6 399 aa15.29■□□□□ 0.04
ATG4B-223ENST00000493618 CNGB3Q9NQW8 809 aa15.29■□□□□ 0.04
ATG4B-223ENST00000493618 ABCC13Q9NSE7 274 aa15.29■□□□□ 0.04
ATG4B-223ENST00000493618 THAP10Q9P2Z0 257 aaPredicted RBP15.29■□□□□ 0.04
ATG4B-223ENST00000493618 PILRBQ9UKJ0 227 aa15.29■□□□□ 0.04
ATG4B-223ENST00000493618 HBS1LQ9Y450 684 aaKnown RBP15.29■□□□□ 0.04
ATG4B-223ENST00000493618 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.29■□□□□ 0.04
ATG4B-223ENST00000493618 TPRP12270 2363 aaKnown RBP15.28■□□□□ 0.04
ATG4B-223ENST00000493618 GOLGA6L7A0A1B0GV03 622 aa15.28■□□□□ 0.04
ATG4B-223ENST00000493618 GFRA2O00451 464 aa15.28■□□□□ 0.04
ATG4B-223ENST00000493618 P4HA2O15460 535 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms