RNA–Protein interactions for RNA: ENST00000492361.1

TNFRSF1B-203, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best)

Gene TNFRSF1B, Length 3,583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-203ENST00000492361 SHKBP1Q8TBC3 707 aa15.7■□□□□ 0.1
TNFRSF1B-203ENST00000492361 SLC44A1Q8WWI5 657 aa15.7■□□□□ 0.1
TNFRSF1B-203ENST00000492361 FERMT1Q9BQL6 677 aa15.7■□□□□ 0.1
TNFRSF1B-203ENST00000492361 NMRK1Q9NWW6 199 aa15.7■□□□□ 0.1
TNFRSF1B-203ENST00000492361 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.7■□□□□ 0.1
TNFRSF1B-203ENST00000492361 TPP1O14773 563 aa15.7■□□□□ 0.1
TNFRSF1B-203ENST00000492361 SERPINB5P36952 375 aa15.7■□□□□ 0.1
TNFRSF1B-203ENST00000492361 CCNHP51946 323 aaPredicted RBP15.7■□□□□ 0.1
TNFRSF1B-203ENST00000492361 BOLA3Q53S33 107 aa15.7■□□□□ 0.1
TNFRSF1B-203ENST00000492361 DEFB106AQ8N104 65 aa15.7■□□□□ 0.1
TNFRSF1B-203ENST00000492361 ARHGAP24Q8N264 748 aa15.7■□□□□ 0.1
TNFRSF1B-203ENST00000492361 GSTCDQ8NEC7 633 aa15.7■□□□□ 0.1
TNFRSF1B-203ENST00000492361 EXT2Q93063 718 aa15.7■□□□□ 0.1
TNFRSF1B-203ENST00000492361 TBCBQ99426 244 aa15.7■□□□□ 0.1
TNFRSF1B-203ENST00000492361 ANKRD31Q8N7Z5 1873 aa15.7■□□□□ 0.1
TNFRSF1B-203ENST00000492361 SORBS2O94875 1100 aaKnown RBP15.69■□□□□ 0.1
TNFRSF1B-203ENST00000492361 APOEP02649 317 aa15.69■□□□□ 0.1
TNFRSF1B-203ENST00000492361 CRYMQ14894 314 aa15.69■□□□□ 0.1
TNFRSF1B-203ENST00000492361 ASRGL1Q7L266 308 aa15.69■□□□□ 0.1
TNFRSF1B-203ENST00000492361 NRDE2Q9H7Z3 1164 aa15.69■□□□□ 0.1
TNFRSF1B-203ENST00000492361 FARP1Q9Y4F1 1045 aaPredicted RBP15.69■□□□□ 0.1
TNFRSF1B-203ENST00000492361 DPPA5A6NC42 116 aa15.69■□□□□ 0.1
TNFRSF1B-203ENST00000492361 SPDYE5A6NIY4 337 aa15.69■□□□□ 0.1
TNFRSF1B-203ENST00000492361 ITM2AO43736 263 aa15.69■□□□□ 0.1
TNFRSF1B-203ENST00000492361 TCEA3O75764 348 aa15.69■□□□□ 0.1
TNFRSF1B-203ENST00000492361 SKIP12755 728 aa15.69■□□□□ 0.1
TNFRSF1B-203ENST00000492361 RPS12P25398 132 aaKnown RBP15.69■□□□□ 0.1
TNFRSF1B-203ENST00000492361 OAZ1P54368 228 aa15.69■□□□□ 0.1
TNFRSF1B-203ENST00000492361 MAP3K7CLP57077 242 aa15.69■□□□□ 0.1
TNFRSF1B-203ENST00000492361 KLC1Q07866 573 aa15.69■□□□□ 0.1
TNFRSF1B-203ENST00000492361 ITKQ08881 620 aa15.69■□□□□ 0.1
TNFRSF1B-203ENST00000492361 TARBP2Q15633 366 aaKnown RBP15.69■□□□□ 0.1
TNFRSF1B-203ENST00000492361 HSP90AA5PQ58FG0 334 aa15.69■□□□□ 0.1
TNFRSF1B-203ENST00000492361 RNF220Q5VTB9 566 aa15.69■□□□□ 0.1
TNFRSF1B-203ENST00000492361 TREML1Q86YW5 311 aa15.69■□□□□ 0.1
TNFRSF1B-203ENST00000492361 STKLD1Q8NE28 680 aa15.69■□□□□ 0.1
TNFRSF1B-203ENST00000492361 MCUQ8NE86 351 aa15.69■□□□□ 0.1
TNFRSF1B-203ENST00000492361 OR52K1Q8NGK4 314 aa15.69■□□□□ 0.1
TNFRSF1B-203ENST00000492361 ALKBH8Q96BT7 664 aaKnown RBP15.69■□□□□ 0.1
TNFRSF1B-203ENST00000492361 OPTNQ96CV9 577 aa15.69■□□□□ 0.1
TNFRSF1B-203ENST00000492361 GPRC5DQ9NZD1 345 aa15.69■□□□□ 0.1
TNFRSF1B-203ENST00000492361 COL4A5P29400 1685 aa15.69■□□□□ 0.1
TNFRSF1B-203ENST00000492361 C3orf70A6NLC5 250 aaPredicted RBP15.69■□□□□ 0.1
TNFRSF1B-203ENST00000492361 C2CD4BA6NLJ0 364 aa15.69■□□□□ 0.1
TNFRSF1B-203ENST00000492361 TM9SF1O15321 606 aa15.69■□□□□ 0.1
TNFRSF1B-203ENST00000492361 DCXO43602 365 aa15.69■□□□□ 0.1
TNFRSF1B-203ENST00000492361 IL18RAPO95256 599 aa15.69■□□□□ 0.1
TNFRSF1B-203ENST00000492361 RIPK1Q13546 671 aa15.69■□□□□ 0.1
TNFRSF1B-203ENST00000492361 RALGPS1Q5JS13 557 aa15.69■□□□□ 0.1
TNFRSF1B-203ENST00000492361 C4orf50Q6ZRC1 276 aa15.69■□□□□ 0.1
TNFRSF1B-203ENST00000492361 PDZD7Q9H5P4 517 aa15.69■□□□□ 0.1
TNFRSF1B-203ENST00000492361 EBF2Q9HAK2 575 aa15.69■□□□□ 0.1
TNFRSF1B-203ENST00000492361 CDHR5Q9HBB8 845 aa15.69■□□□□ 0.1
TNFRSF1B-203ENST00000492361 SLC5A4Q9NY91 659 aa15.69■□□□□ 0.1
TNFRSF1B-203ENST00000492361 SLC39A10Q9ULF5 831 aa15.69■□□□□ 0.1
TNFRSF1B-203ENST00000492361 PSAT1Q9Y617 370 aa15.69■□□□□ 0.1
TNFRSF1B-203ENST00000492361 EVPLQ92817 2033 aa15.69■□□□□ 0.1
TNFRSF1B-203ENST00000492361 TBX10O75333 385 aa15.68■□□□□ 0.1
TNFRSF1B-203ENST00000492361 PROCP04070 461 aa15.68■□□□□ 0.1
TNFRSF1B-203ENST00000492361 POU5F1BQ06416 359 aa15.68■□□□□ 0.1
TNFRSF1B-203ENST00000492361 IZUMO2Q6UXV1 221 aa15.68■□□□□ 0.1
TNFRSF1B-203ENST00000492361 GBP5Q96PP8 586 aa15.68■□□□□ 0.1
TNFRSF1B-203ENST00000492361 WWP1Q9H0M0 922 aa15.68■□□□□ 0.1
TNFRSF1B-203ENST00000492361 DCLRE1BQ9H816 532 aa15.68■□□□□ 0.1
TNFRSF1B-203ENST00000492361 XAB2Q9HCS7 855 aaKnown RBP15.68■□□□□ 0.1
TNFRSF1B-203ENST00000492361 DCAF8L1A6NGE4 600 aa15.68■□□□□ 0.1
TNFRSF1B-203ENST00000492361 RNF103O00237 685 aa15.68■□□□□ 0.1
TNFRSF1B-203ENST00000492361 ZNF280AP59817 542 aaPredicted RBP15.68■□□□□ 0.1
TNFRSF1B-203ENST00000492361 CLDN10P78369 228 aa15.68■□□□□ 0.1
TNFRSF1B-203ENST00000492361 SOWAHAQ2M3V2 549 aa15.68■□□□□ 0.1
TNFRSF1B-203ENST00000492361 TSHZ1Q6ZSZ6 1077 aa15.68■□□□□ 0.1
TNFRSF1B-203ENST00000492361 RIOX2Q8IUF8 465 aa15.68■□□□□ 0.1
TNFRSF1B-203ENST00000492361 PLA2G4CQ9UP65 541 aa15.68■□□□□ 0.1
TNFRSF1B-203ENST00000492361 B4GALT4O60513 344 aa15.67■□□□□ 0.1
TNFRSF1B-203ENST00000492361 LUC7L3O95232 432 aaKnown RBP15.67■□□□□ 0.1
TNFRSF1B-203ENST00000492361 SLC10A2Q12908 348 aaPredicted RBP15.67■□□□□ 0.1
TNFRSF1B-203ENST00000492361 CDKL3Q8IVW4 592 aaPredicted RBP15.67■□□□□ 0.1
TNFRSF1B-203ENST00000492361 SCUBE1Q8IWY4 988 aa15.67■□□□□ 0.1
TNFRSF1B-203ENST00000492361 SNX31Q8N9S9 440 aa15.67■□□□□ 0.1
TNFRSF1B-203ENST00000492361 CMASQ8NFW8 434 aaPredicted RBP15.67■□□□□ 0.1
TNFRSF1B-203ENST00000492361 DNAJB3Q8WWF6 145 aa15.67■□□□□ 0.1
TNFRSF1B-203ENST00000492361 SLC10A4Q96EP9 437 aa15.67■□□□□ 0.1
TNFRSF1B-203ENST00000492361 CDCA5Q96FF9 252 aa15.67■□□□□ 0.1
TNFRSF1B-203ENST00000492361 TSNARE1Q96NA8 513 aa15.67■□□□□ 0.1
TNFRSF1B-203ENST00000492361 KANSL3Q9P2N6 904 aa15.67■□□□□ 0.1
TNFRSF1B-203ENST00000492361 SIPA1L1O43166 1804 aa15.67■□□□□ 0.1
TNFRSF1B-203ENST00000492361 HUS1O60921 280 aa15.67■□□□□ 0.1
TNFRSF1B-203ENST00000492361 TRPA1O75762 1119 aa15.67■□□□□ 0.1
TNFRSF1B-203ENST00000492361 RECQL4O94761 1208 aa15.67■□□□□ 0.1
TNFRSF1B-203ENST00000492361 SLC6A3Q01959 620 aa15.67■□□□□ 0.1
TNFRSF1B-203ENST00000492361 TNFAIP2Q03169 654 aa15.67■□□□□ 0.1
TNFRSF1B-203ENST00000492361 GEN1Q17RS7 908 aa15.67■□□□□ 0.1
TNFRSF1B-203ENST00000492361 RYBPQ8N488 228 aaPredicted RBP15.67■□□□□ 0.1
TNFRSF1B-203ENST00000492361 PAF1Q8N7H5 531 aa15.67■□□□□ 0.1
TNFRSF1B-203ENST00000492361 PIP4K2CQ8TBX8 421 aa15.67■□□□□ 0.1
TNFRSF1B-203ENST00000492361 TFB1MQ8WVM0 346 aaKnown RBP15.67■□□□□ 0.1
TNFRSF1B-203ENST00000492361 TSC22D3Q99576 134 aa15.67■□□□□ 0.1
TNFRSF1B-203ENST00000492361 SCOCQ9UIL1 159 aa15.67■□□□□ 0.1
TNFRSF1B-203ENST00000492361 TNFSF13BQ9Y275 285 aa15.67■□□□□ 0.1
TNFRSF1B-203ENST00000492361 DFFAO00273 331 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms